BLASTX nr result

ID: Papaver23_contig00026869 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026869
         (403 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyr...    82   3e-14
ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245...    79   5e-13
ref|XP_002300156.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]    75   4e-12
ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis tha...    74   9e-12

>ref|XP_002875595.1| zinc knuckle family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297321433|gb|EFH51854.1| zinc knuckle family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 337

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 9/79 (11%)
 Frame = +1

Query: 31  SYTYNQTSNLDAANSKNFSGSRD--TCFKCGLDGHWAKDCPAK---PTVIAGGI----SS 183
           SY+  + SNL  ++++ +  ++    C+KCG +GHWA+DC A+   PT  AG +    SS
Sbjct: 209 SYSVTKNSNLGDSDTRGYQTAKTGAPCYKCGKEGHWARDCTAQSGNPTYEAGQVKSSSSS 268

Query: 184 GSCYKCGVSGHWAKDCTGQ 240
           G CYKCG  GHWAKDCTGQ
Sbjct: 269 GECYKCGKQGHWAKDCTGQ 287



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 27/57 (47%), Positives = 30/57 (52%), Gaps = 7/57 (12%)
 Frame = +1

Query: 85  SGSRDTCFKCGLDGHWAKDCPAKP-------TVIAGGISSGSCYKCGVSGHWAKDCT 234
           S S   C+KCG  GHWAKDC  +               S G CYKCG  GHWA+DCT
Sbjct: 265 SSSSGECYKCGKQGHWAKDCTGQSGDPQFQSRQAKSTTSGGDCYKCGKPGHWARDCT 321


>ref|XP_002264670.1| PREDICTED: uncharacterized protein LOC100245024 [Vitis vinifera]
           gi|296084189|emb|CBI24577.3| unnamed protein product
           [Vitis vinifera]
          Length = 296

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 6/83 (7%)
 Frame = +1

Query: 19  PERASYTYNQTSNLDAANSKNFSGSRDTCFKCGLDGHWAKDCPA---KPTVIAGG--ISS 183
           P  AS  YN T+N    +    SGS  +CFKCG +GHWAKDC     +P   +GG   SS
Sbjct: 211 PVGASRGYNTTTNASIKSYGAQSGS--SCFKCGKEGHWAKDCQMPSPEPLADSGGRPASS 268

Query: 184 GSCYKCGVSGHWAKDC-TGQDVK 249
           G+CYKCG  GHWA+DC + QD K
Sbjct: 269 GTCYKCGKPGHWARDCSSSQDTK 291


>ref|XP_002300156.1| predicted protein [Populus trichocarpa] gi|222847414|gb|EEE84961.1|
           predicted protein [Populus trichocarpa]
          Length = 370

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
 Frame = +1

Query: 55  NLDAANSKNFSG-SRDTCFKCGLDGHWAKDC-----PAKPTVIAGGISSGSCYKCGVSGH 216
           N++ +++K+F   +  +CFKCG +GHWAKDC      +  T  AG  SSG+CYKCG  GH
Sbjct: 294 NMNDSSNKSFGARTGSSCFKCGKEGHWAKDCGMSTSDSPATFGAGSGSSGTCYKCGKPGH 353

Query: 217 WAKDCTGQDVKS 252
           WA+DCT    K+
Sbjct: 354 WARDCTSSQYKN 365


>gb|ABA18102.1| zinc knuckle family protein [Olimarabidopsis pumila]
          Length = 369

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 37/71 (52%), Positives = 43/71 (60%), Gaps = 8/71 (11%)
 Frame = +1

Query: 103 CFKCGLDGHWAKDCPAK-------PTVIAGGISSGSCYKCGVSGHWAKDCTGQDVKSGNG 261
           C+KCG  GHWA+DC A+       P  +    SSG CYKCG  GHWA+DCTGQ   SGN 
Sbjct: 267 CYKCGKQGHWARDCTAQSGNPTYEPGKVKSSSSSGECYKCGKQGHWARDCTGQ---SGNQ 323

Query: 262 S-RSGPASYTS 291
             +SG A  TS
Sbjct: 324 QFQSGQAKSTS 334



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 9/85 (10%)
 Frame = +1

Query: 31  SYTYNQTSNLDAANSKNFSGSRD--TCFKCGLDGHWAKDC-------PAKPTVIAGGISS 183
           SY+  + SNL  ++++ +  ++    C+KCG +GHWA+DC       P++   +    ++
Sbjct: 205 SYSVTKNSNLGDSDTRGYQIAKTGTPCYKCGKEGHWARDCTLQSPIPPSEMGPVRSTSAA 264

Query: 184 GSCYKCGVSGHWAKDCTGQDVKSGN 258
           G CYKCG  GHWA+DCT Q   SGN
Sbjct: 265 GECYKCGKQGHWARDCTAQ---SGN 286



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/57 (45%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
 Frame = +1

Query: 85  SGSRDTCFKCGLDGHWAKDCPAKPT-------VIAGGISSGSCYKCGVSGHWAKDCT 234
           S S   C+KCG  GHWA+DC  +               S+G CYKCG  GHWA+DCT
Sbjct: 297 SSSSGECYKCGKQGHWARDCTGQSGNQQFQSGQAKSTSSAGDCYKCGKPGHWARDCT 353


>ref|NP_189872.1| CCHC-type zinc knuckle protein [Arabidopsis thaliana]
           gi|7529257|emb|CAB86673.1| putative protein [Arabidopsis
           thaliana] gi|17529084|gb|AAL38752.1| unknown protein
           [Arabidopsis thaliana] gi|22136980|gb|AAM91719.1|
           unknown protein [Arabidopsis thaliana]
           gi|332644235|gb|AEE77756.1| CCHC-type zinc knuckle
           protein [Arabidopsis thaliana]
          Length = 372

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
 Frame = +1

Query: 49  TSNLDAANSKNFSGSRDTCFKCGLDGHWAKDCPAK-------PTVIAGGISSGSCYKCGV 207
           T   D    K+ S + D CFKCG  GHW++DC A+       P  +    SSG CYKCG 
Sbjct: 253 TVQSDTGPVKSTSAAGD-CFKCGKPGHWSRDCTAQSGNPKYEPGQMKSSSSSGECYKCGK 311

Query: 208 SGHWAKDCTGQDVKSGNGSRSGPASYTS 291
            GHW++DCTGQ   S    +SG A  TS
Sbjct: 312 QGHWSRDCTGQ--SSNQQFQSGQAKSTS 337



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 7/57 (12%)
 Frame = +1

Query: 85  SGSRDTCFKCGLDGHWAKDCPAKPT-------VIAGGISSGSCYKCGVSGHWAKDCT 234
           S S   C+KCG  GHW++DC  + +             S+G CYKCG +GHW++DCT
Sbjct: 300 SSSSGECYKCGKQGHWSRDCTGQSSNQQFQSGQAKSTSSTGDCYKCGKAGHWSRDCT 356


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