BLASTX nr result
ID: Papaver23_contig00026711
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00026711
(902 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containi... 110 7e-52
ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-48
ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containi... 100 1e-48
ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 106 4e-48
ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. l... 93 1e-45
>ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Glycine max]
Length = 618
Score = 110 bits (275), Expect(3) = 7e-52
Identities = 55/103 (53%), Positives = 75/103 (72%), Gaps = 2/103 (1%)
Frame = +1
Query: 205 VYAFVAPDGNHPRIMEIYEKLDDLAAEMK-LDYKVEIESDLHDVEEERED-LLRHHSEKL 378
+++F + NHP+I +IY KLD+L E+K L+YKV+ +DLHDVEE R+ LLRHHSEKL
Sbjct: 495 IHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKL 554
Query: 379 TLAFGLIALPFGVPIRIKKNLQICRDSHTFVMLASIISGRKTL 507
+ FGL+ LP +PIRI KNL+IC D HTF+ L S + R+ +
Sbjct: 555 AITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREII 597
Score = 90.9 bits (224), Expect(3) = 7e-52
Identities = 42/72 (58%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
Frame = +3
Query: 9 GTLELAEVAAKNIFEIEPDNAGNHALLSNIYAADRKWDKVAGSRKLLEDSGAKKEMGKSW 188
G +E AE+AAK +FE+EP+NAGNH LL+NIYAA++KWD+VA +RKLL ++ +KE G SW
Sbjct: 429 GNIEFAEIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSW 488
Query: 189 IDI---IHSLRI 215
I+I IHS +
Sbjct: 489 IEIKNKIHSFTV 500
Score = 50.8 bits (120), Expect(3) = 7e-52
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +3
Query: 498 ENIVRDTNRFHHFRDGSCSCGGFW 569
E IVRDTNRFHHF+DG CSCG FW
Sbjct: 595 EIIVRDTNRFHHFKDGFCSCGEFW 618
>ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 100 bits (249), Expect(3) = 1e-48
Identities = 51/95 (53%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = +1
Query: 205 VYAFVAPDGNHPRIMEIYEKLDDLAAEM-KLDYKVEIESDLHDVEEE-REDLLRHHSEKL 378
V+ F+ + NHP+I+EIY KL+++ E+ KL YKVE + DLH V E +++LLRHHSEKL
Sbjct: 515 VHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKL 574
Query: 379 TLAFGLIALPFGVPIRIKKNLQICRDSHTFVMLAS 483
GL+ LP PIRI KNL+IC D H+F+ LAS
Sbjct: 575 AFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609
Score = 92.0 bits (227), Expect(3) = 1e-48
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = +3
Query: 9 GTLELAEVAAKNIFEIEPDNAGNHALLSNIYAADRKWDKVAGSRKLLEDSGAKKEMGKSW 188
G LELAEVAAK +F+IEP N+GN+ LLSN+YAA+ KWD+VA RKLL++S KKE GKSW
Sbjct: 449 GNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSW 508
Query: 189 IDIIHSLRICCAG 227
I+I + + G
Sbjct: 509 IEIKDKVHLFMVG 521
Score = 48.9 bits (115), Expect(3) = 1e-48
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 504 IVRDTNRFHHFRDGSCSCGGFW 569
IVRDTNRFHHF++G CSCG FW
Sbjct: 617 IVRDTNRFHHFKNGCCSCGDFW 638
>ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 100 bits (249), Expect(3) = 1e-48
Identities = 51/95 (53%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Frame = +1
Query: 205 VYAFVAPDGNHPRIMEIYEKLDDLAAEM-KLDYKVEIESDLHDVEEE-REDLLRHHSEKL 378
V+ F+ + NHP+I+EIY KL+++ E+ KL YKVE + DLH V E +++LLRHHSEKL
Sbjct: 515 VHLFMVGERNHPKIVEIYSKLNEVMDELQKLGYKVETQHDLHQVGESIKQELLRHHSEKL 574
Query: 379 TLAFGLIALPFGVPIRIKKNLQICRDSHTFVMLAS 483
GL+ LP PIRI KNL+IC D H+F+ LAS
Sbjct: 575 AFTMGLLFLPPNAPIRIMKNLRICGDCHSFMKLAS 609
Score = 92.0 bits (227), Expect(3) = 1e-48
Identities = 44/73 (60%), Positives = 56/73 (76%)
Frame = +3
Query: 9 GTLELAEVAAKNIFEIEPDNAGNHALLSNIYAADRKWDKVAGSRKLLEDSGAKKEMGKSW 188
G LELAEVAAK +F+IEP N+GN+ LLSN+YAA+ KWD+VA RKLL++S KKE GKSW
Sbjct: 449 GNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKWDEVAKMRKLLKESDVKKERGKSW 508
Query: 189 IDIIHSLRICCAG 227
I+I + + G
Sbjct: 509 IEIKDKVHLFMVG 521
Score = 48.9 bits (115), Expect(3) = 1e-48
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +3
Query: 504 IVRDTNRFHHFRDGSCSCGGFW 569
IVRDTNRFHHF++G CSCG FW
Sbjct: 617 IVRDTNRFHHFKNGCCSCGDFW 638
>ref|XP_003535741.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g04780-like [Glycine max]
Length = 632
Score = 106 bits (264), Expect(3) = 4e-48
Identities = 53/103 (51%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
Frame = +1
Query: 205 VYAFVAPDGNHPRIMEIYEKLDDLAAEMK-LDYKVEIESDLHDVEEERED-LLRHHSEKL 378
+++F + NHP+I + Y KLD+L E+K L+YKV+ +DLHDVEE R+ LL HHSEKL
Sbjct: 509 IHSFTVGERNHPQIDDNYAKLDNLVVELKKLNYKVDTNNDLHDVEESRKHMLLGHHSEKL 568
Query: 379 TLAFGLIALPFGVPIRIKKNLQICRDSHTFVMLASIISGRKTL 507
+ FGL+ LP +PIRI KNL+IC D HTF+ L S + R+ +
Sbjct: 569 AITFGLVCLPTEIPIRIIKNLRICGDCHTFMKLVSKFASREII 611
Score = 86.7 bits (213), Expect(3) = 4e-48
Identities = 41/72 (56%), Positives = 57/72 (79%), Gaps = 3/72 (4%)
Frame = +3
Query: 9 GTLELAEVAAKNIFEIEPDNAGNHALLSNIYAADRKWDKVAGSRKLLEDSGAKKEMGKSW 188
G +E AE+AAK++FE+EP+NAGNH LL+NIYAA++K D+VA +RKLL ++ +KE G SW
Sbjct: 443 GNIEFAEIAAKHLFEMEPNNAGNHILLANIYAANKKSDEVARARKLLRETDVRKERGTSW 502
Query: 189 IDI---IHSLRI 215
I+I IHS +
Sbjct: 503 IEIKNKIHSFTV 514
Score = 46.6 bits (109), Expect(3) = 4e-48
Identities = 19/23 (82%), Positives = 20/23 (86%)
Frame = +3
Query: 498 ENIVRDTNRFHHFRDGSCSCGGF 566
E IVRDTNRFHHF+DG CSCG F
Sbjct: 609 EIIVRDTNRFHHFKDGLCSCGEF 631
>ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis
lyrata subsp. lyrata]
Length = 637
Score = 93.2 bits (230), Expect(3) = 1e-45
Identities = 44/70 (62%), Positives = 56/70 (80%), Gaps = 3/70 (4%)
Frame = +3
Query: 15 LELAEVAAKNIFEIEPDNAGNHALLSNIYAADRKWDKVAGSRKLLEDSGAKKEMGKSWID 194
LELAEVAAK +FE+EP+NAGNH LLSNIYAA+++W+++A SRKLL D KK G+SWID
Sbjct: 450 LELAEVAAKKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGQSWID 509
Query: 195 I---IHSLRI 215
I +H R+
Sbjct: 510 IKDKVHIFRV 519
Score = 90.5 bits (223), Expect(3) = 1e-45
Identities = 49/100 (49%), Positives = 65/100 (65%), Gaps = 2/100 (2%)
Frame = +1
Query: 205 VYAFVAPDGNHPRIMEIYEKLDDLAAEM-KLDYKVEIESDLHDVE-EEREDLLRHHSEKL 378
V+ F + +HPRI EI LD+L E+ K YK +E +LHDVE ++E+LL HSEKL
Sbjct: 514 VHIFRVGESSHPRIREICTMLDNLVIELRKFGYKPSVEHELHDVEIGKKEELLMQHSEKL 573
Query: 379 TLAFGLIALPFGVPIRIKKNLQICRDSHTFVMLASIISGR 498
L FGL+ LP G +RI KNL+IC D H F+ AS+ + R
Sbjct: 574 ALVFGLMCLPEGSTVRIMKNLRICVDCHEFMKAASMATRR 613
Score = 47.4 bits (111), Expect(3) = 1e-45
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 504 IVRDTNRFHHFRDGSCSCGGFW 569
IVRD NRFHHF DG CSCG FW
Sbjct: 616 IVRDANRFHHFSDGHCSCGEFW 637