BLASTX nr result

ID: Papaver23_contig00026459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026459
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    77   7e-12
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    77   7e-12
ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|2...    67   8e-09
ref|YP_004219145.1| ribonuclease H [Granulicella tundricola MP5A...    66   2e-08
gb|ABN08954.1| Ribonuclease H [Medicago truncatula]                    65   5e-08

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
            gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
            protein ccsA [Medicago truncatula]
          Length = 666

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
 Frame = +1

Query: 730  WFPPEQEYVMFCCDGSSFGNPGSTGFGVVVGDSNSQVLGALTGGIGIASNYLAKSYGIMC 909
            W PP  + V   CDGSS G       G+V+ DSN   LGA++  IG A+   A+    M 
Sbjct: 216  WKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMM 275

Query: 910  ALEMAVQ*NMLKIIVISDSKTVLAEFAQGM-VTWFLKGRWSIATRKLNSISYQ--HCYRE 1080
            A+E A +  ++ + + +DS  V+  F +G+ V W ++ RW       +SIS    H  RE
Sbjct: 276  AMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILRE 335

Query: 1081 VNFSADNMAKNGASLAAGVRQILLGRP 1161
             N  AD +AK+G  L+    Q+    P
Sbjct: 336  GNMVADALAKHGQGLSLYYTQLWTSPP 362


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 77.4 bits (189), Expect = 7e-12
 Identities = 50/147 (34%), Positives = 74/147 (50%), Gaps = 3/147 (2%)
 Frame = +1

Query: 730  WFPPEQEYVMFCCDGSSFGNPGSTGFGVVVGDSNSQVLGALTGGIGIASNYLAKSYGIMC 909
            W PP  + V   CDGSS G       G+V+ DSN   LGA++  IG A+   A+    M 
Sbjct: 53   WKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDSNHHFLGAISSNIGNATPLEAEFCAGMM 112

Query: 910  ALEMAVQ*NMLKIIVISDSKTVLAEFAQGM-VTWFLKGRWSIATRKLNSISYQ--HCYRE 1080
            A+E A +  ++ + + +DS  V+  F +G+ V W ++ RW       +SIS    H  RE
Sbjct: 113  AMEKAQEMQLMHVCLETDSLKVVNAFNKGLGVPWQMRARWQNCWDFCDSISCSCVHILRE 172

Query: 1081 VNFSADNMAKNGASLAAGVRQILLGRP 1161
             N  AD +AK+G  L+    Q+    P
Sbjct: 173  GNMVADALAKHGQGLSLYYTQLWTSPP 199


>ref|XP_002299876.1| predicted protein [Populus trichocarpa] gi|222847134|gb|EEE84681.1|
            predicted protein [Populus trichocarpa]
          Length = 1221

 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 8/150 (5%)
 Frame = +1

Query: 691  IRFSRFQFIKT-CFWFPPEQEYVMFCCDGSSFGNPGSTGFGVVVGDSNSQVLGALTGGIG 867
            IR+S  Q  +T   W PP      +  DGSS G PG +G G V+ + +  +LG  +  +G
Sbjct: 1063 IRWSNVQITRTGVIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRNHHGHLLGIFSLPVG 1122

Query: 868  IASNYLAKSYGIMCALEMAVQ*NML---KIIVISDSKTVLA----EFAQGMVTWFLKGRW 1026
            I  + +A+   ++ A+E++    +L    I + SDS  V++       +  + W L    
Sbjct: 1123 ILDSNIAELRAVVKAVELSASNRLLHHKHITIESDSTNVISWMHNPHNRPWMHWELFSTV 1182

Query: 1027 SIATRKLNSISYQHCYREVNFSADNMAKNG 1116
               TR   SI++ H YRE N  AD MAK G
Sbjct: 1183 QRLTRFFGSITFAHVYRESNNMADCMAKQG 1212


>ref|YP_004219145.1| ribonuclease H [Granulicella tundricola MP5ACTX9]
            gi|321164660|gb|ADW70365.1| ribonuclease H [Granulicella
            tundricola MP5ACTX9]
          Length = 203

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 45/132 (34%), Positives = 68/132 (51%), Gaps = 7/132 (5%)
 Frame = +1

Query: 733  FPPEQEYVMFC-CDGSSFGNPGSTGFGVVVGDSNSQVLGALTGGIGIASNYLAKSYGIMC 909
            FP +    +F  CDG S GNPG +G+G V+ D+  Q +  L+  +GI +N  A+  G++ 
Sbjct: 4    FPSDLPETIFAHCDGGSRGNPGPSGYGAVITDTGGQKIAELSEFLGIRTNNYAEYSGLLA 63

Query: 910  ALEMAVQ*NMLKIIVISDSKTVLAEFAQG---MVTWFLKGRWSIA---TRKLNSISYQHC 1071
             L  AV+   L + V+SDS+ ++ +  QG   + +  LK  W  A     KL S    H 
Sbjct: 64   VLAYAVENKRLSLKVVSDSELMVKQI-QGKYKVNSPDLKPLWQEARDRIAKLKSFEISHA 122

Query: 1072 YREVNFSADNMA 1107
             R  N  AD +A
Sbjct: 123  LRHKNKDADALA 134


>gb|ABN08954.1| Ribonuclease H [Medicago truncatula]
          Length = 175

 Score = 64.7 bits (156), Expect = 5e-08
 Identities = 45/134 (33%), Positives = 68/134 (50%), Gaps = 3/134 (2%)
 Frame = +1

Query: 736  PPEQEYVMFCCDGSSFGNPGSTGFGVVVGDSNSQVLGALTGGIGIASNYLAKSYGIMCAL 915
            P  Q  V    DGS+FG P     G V  +  +  LG     IG A+ + A+    + A+
Sbjct: 5    PAVQGRVKINLDGSAFGAPSCGATGGVFRNWQTHSLGGFAQNIGHATCFKAELCAAIFAI 64

Query: 916  EMAVQ*NMLKIIVISDSKTVLAEFAQG-MVTWFLKGRWS--IATRKLNSISYQHCYREVN 1086
            E +++ N+  I + +DSK V+  F+    V W L+ RW+  +A  +       H +RE N
Sbjct: 65   EKSIEYNLRDIWLETDSKLVVKAFSSSEHVPWQLRTRWNNCLALAQKIKCVCTHIHREGN 124

Query: 1087 FSADNMAKNGASLA 1128
              AD++AKNG SLA
Sbjct: 125  AGADSLAKNGKSLA 138


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