BLASTX nr result

ID: Papaver23_contig00026359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026359
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   179   2e-43
emb|CBI17233.3| unnamed protein product [Vitis vinifera]              179   2e-43
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   177   1e-42
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   177   1e-42
ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/152 (59%), Positives = 112/152 (73%), Gaps = 4/152 (2%)
 Frame = -3

Query: 446 NGMRDAAKYADAVILLINAYVGFEMETFEFVNVLRLQGMPKVMGVLTSLDKCD----LFE 279
           NGM DAAK+AD  +LLI+   GFEMETFEF+N+L++ G PKVMGVLT LDK      L +
Sbjct: 142 NGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKK 201

Query: 278 TEEHLINHFSIEICKEARLFCLSGLDHGMYPEHEIRQLASFISAMDFHPLSWQAAQPYLL 99
           T++ L + F  EI   A+LF LSGL HG YP+ EI  LA FIS M FHPLSW+A+ PY+L
Sbjct: 202 TKQRLKHRFWTEIYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYIL 261

Query: 98  SEHFEDVTRPERVHTDNRCNRDIVLHGYLRGC 3
            + FEDVT PERV  +N+C+R+I L+GYLRGC
Sbjct: 262 VDRFEDVTPPERVQLNNKCDRNITLYGYLRGC 293


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score =  179 bits (455), Expect = 2e-43
 Identities = 90/152 (59%), Positives = 112/152 (73%), Gaps = 4/152 (2%)
 Frame = -3

Query: 446 NGMRDAAKYADAVILLINAYVGFEMETFEFVNVLRLQGMPKVMGVLTSLDKCD----LFE 279
           NGM DAAK+AD  +LLI+   GFEMETFEF+N+L++ G PKVMGVLT LDK      L +
Sbjct: 142 NGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKK 201

Query: 278 TEEHLINHFSIEICKEARLFCLSGLDHGMYPEHEIRQLASFISAMDFHPLSWQAAQPYLL 99
           T++ L + F  EI   A+LF LSGL HG YP+ EI  LA FIS M FHPLSW+A+ PY+L
Sbjct: 202 TKQRLKHRFWTEIYDGAKLFYLSGLVHGKYPKREIHNLARFISVMKFHPLSWRASHPYIL 261

Query: 98  SEHFEDVTRPERVHTDNRCNRDIVLHGYLRGC 3
            + FEDVT PERV  +N+C+R+I L+GYLRGC
Sbjct: 262 VDRFEDVTPPERVQLNNKCDRNITLYGYLRGC 293


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/152 (58%), Positives = 110/152 (72%), Gaps = 4/152 (2%)
 Frame = -3

Query: 446 NGMRDAAKYADAVILLINAYVGFEMETFEFVNVLRLQGMPKVMGVLTSLDKCD----LFE 279
           NGM DAAK+AD  +LLI+   GFEMETFEF+N+L   G+PKVMGVLT LDK      L +
Sbjct: 143 NGMIDAAKFADLTLLLIDGAYGFEMETFEFLNILHNHGLPKVMGVLTHLDKFKDAKKLRK 202

Query: 278 TEEHLINHFSIEICKEARLFCLSGLDHGMYPEHEIRQLASFISAMDFHPLSWQAAQPYLL 99
           T++ L + F  EI   A+LF LSGL HG YP+ E+  LA FIS M F PLSW+   PY+L
Sbjct: 203 TKQRLKHRFWTEIRTGAKLFYLSGLVHGKYPKREVHNLARFISVMKFQPLSWRTNHPYVL 262

Query: 98  SEHFEDVTRPERVHTDNRCNRDIVLHGYLRGC 3
            + FEDVT PERVHT+N+C+R+I L+GYLRGC
Sbjct: 263 VDRFEDVTPPERVHTNNKCDRNITLYGYLRGC 294


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score =  177 bits (448), Expect = 1e-42
 Identities = 89/152 (58%), Positives = 110/152 (72%), Gaps = 4/152 (2%)
 Frame = -3

Query: 446 NGMRDAAKYADAVILLINAYVGFEMETFEFVNVLRLQGMPKVMGVLTSLDKCD----LFE 279
           NGM DAAK+AD  +LLI+   GFEMETFEF+N+L   G+PKVMGVLT LDK      L +
Sbjct: 143 NGMIDAAKFADLTLLLIDGAYGFEMETFEFLNILHNHGLPKVMGVLTHLDKFKDAKKLRK 202

Query: 278 TEEHLINHFSIEICKEARLFCLSGLDHGMYPEHEIRQLASFISAMDFHPLSWQAAQPYLL 99
           T++ L + F  EI   A+LF LSGL HG YP+ E+  LA FIS M F PLSW+   PY+L
Sbjct: 203 TKQRLKHRFWTEIRTGAKLFYLSGLVHGKYPKREVHNLARFISVMKFQPLSWRTNHPYVL 262

Query: 98  SEHFEDVTRPERVHTDNRCNRDIVLHGYLRGC 3
            + FEDVT PERVHT+N+C+R+I L+GYLRGC
Sbjct: 263 VDRFEDVTPPERVHTNNKCDRNITLYGYLRGC 294


>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  176 bits (445), Expect = 2e-42
 Identities = 87/152 (57%), Positives = 111/152 (73%), Gaps = 4/152 (2%)
 Frame = -3

Query: 446 NGMRDAAKYADAVILLINAYVGFEMETFEFVNVLRLQGMPKVMGVLTSLDKCD----LFE 279
           NGM DAAK+AD  +LLI+   GFEMETFEF+N+L++ G PK+MGVLT LD+      L +
Sbjct: 139 NGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFPKIMGVLTHLDQFKDVKKLKK 198

Query: 278 TEEHLINHFSIEICKEARLFCLSGLDHGMYPEHEIRQLASFISAMDFHPLSWQAAQPYLL 99
           T++ L + F  EI   A+LF LSGL HG Y + EI  LA FIS M FHPLSW+ + PY+L
Sbjct: 199 TKQRLKHRFWTEIYDGAKLFYLSGLIHGKYVKREIHNLARFISVMKFHPLSWRTSHPYVL 258

Query: 98  SEHFEDVTRPERVHTDNRCNRDIVLHGYLRGC 3
           ++ FEDVT PERV  DN+C+R+I L+GYLRGC
Sbjct: 259 ADRFEDVTPPERVRVDNKCDRNITLYGYLRGC 290


Top