BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026320
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulga...    94   4e-17
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    91   4e-16
ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis ...    91   5e-16
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    90   9e-16
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    89   1e-15

>emb|CCA66020.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1365

 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 80/320 (25%), Positives = 142/320 (44%), Gaps = 20/320 (6%)
 Frame = -2

Query: 940  WKKLWKLQSLPRIRLFIWKLIQKALPTSSRLAAHNPEVSPECQMCNNQAMEKENHLFRTC 761
            W K W    LP+ + F W+L+ KAL TSS L   N  +   C +C  Q  E E+HLFR C
Sbjct: 1054 WNKFWASDLLPKWKFFTWRLLNKALATSSNLRKRNILIQEMCSLC-KQDKENESHLFRDC 1112

Query: 760  PFARAVWFGYSLDAVNSRINTDTISKWV-----YLWIADQNFSQFREQIAIIIWFIWKYR 596
              +R VW    L      +   +I  W+      LW  D   S    +    +W IW +R
Sbjct: 1113 NISRHVWASSLLGIRICPMTVISIEDWIKNFLKLLWKEDGVKSPRVSEFIATLWAIWIHR 1172

Query: 595  YEVVFRKTIPDPASLIQQIKMFIQSSVIKEETKSQGIQKTKIPIHVWNNIRSD------- 437
              V+FR    +P ++     M ++ +++KE  +S   +    P+    N R +       
Sbjct: 1173 NNVIFRSEEVNPVAI-----MNLKIALLKEIRESSKFRDRNNPLSHIENSRLEGCHVSQL 1227

Query: 436  ------WIIFIDASYKKENLSMGYAFILYSADQEAFLHISAGSD--WASSTIHAEAKALL 281
                   I+ +D ++K+       A I +SA  +    I  G+D   + S++  EA A+L
Sbjct: 1228 DSTSDKCIVKVDGAWKRHKQKNPRAGIGWSALLDN-SKIFEGNDVVISLSSLQTEAHAVL 1286

Query: 280  SALNWLENNILSSVCIVTDCKLLLDSITKKDADASWVAENTIKEAISLLDKLPQAQVKFI 101
              L     + ++ V I +D ++L+ ++  +     +   +   +  ++ +K    +++ +
Sbjct: 1287 RGLREAFAHGVNRVHICSDSRVLVQALHNR--QYPFEVASIAHDIQAMCNKFLFCKIQHV 1344

Query: 100  NRDYNAAADSVAKEARIRRL 41
             RD  A A ++A  AR+  L
Sbjct: 1345 GRDVVAPAHALATAARLGNL 1364


>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1524

 Score = 90.9 bits (224), Expect = 4e-16
 Identities = 74/302 (24%), Positives = 132/302 (43%), Gaps = 11/302 (3%)
 Frame = -2

Query: 934  KLWKLQSLPRIRLFIWKLIQKALPTSSRLAAHNPEVSPECQMCNNQAMEKENHLFRTCPF 755
            ++W L  +P+++ F+W+ + +AL T+ RL      + P C  C+ +  E  NH   TCPF
Sbjct: 1201 RIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRE-NESINHALFTCPF 1259

Query: 754  ARAVWFGYSLDAVNSRINTDTISK---WVYLWIADQNFSQFREQIAI-IIWFIWKYRYEV 587
            A   W+      + +++ ++   +    +  ++ D   S F + + + +IW IWK R  V
Sbjct: 1260 ATMAWWLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNV 1319

Query: 586  VFRKTIPDPASLIQQIK------MFIQSSVIKEETKSQGIQKTKIPIHVWNNIRSDWI-I 428
            VF K    P+  +   K      +    S  K  + ++ I + KI    W N  + ++  
Sbjct: 1320 VFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIE---WRNPPATYVKC 1376

Query: 427  FIDASYKKENLSMGYAFILYSADQEAFLHISAGSDWASSTIHAEAKALLSALNWLENNIL 248
              DA +  + L     +I+ +         S      S+ + AE KALL+AL        
Sbjct: 1377 NFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGY 1436

Query: 247  SSVCIVTDCKLLLDSITKKDADASWVAENTIKEAISLLDKLPQAQVKFINRDYNAAADSV 68
            + V +  DC+ L++ I      +S    N +++     +K    Q  FI R  N  A  +
Sbjct: 1437 TQVFMEGDCQTLINLINGISFHSS--LANHLEDISFWANKFASIQFGFIRRKGNKLAHVL 1494

Query: 67   AK 62
            AK
Sbjct: 1495 AK 1496


>ref|NP_187562.1| RNase H domain-containing protein [Arabidopsis thaliana]
            gi|6682231|gb|AAF23283.1|AC016661_8 putative non-LTR
            reverse transcriptase [Arabidopsis thaliana]
            gi|332641254|gb|AEE74775.1| RNase H domain-containing
            protein [Arabidopsis thaliana]
          Length = 484

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 74/302 (24%), Positives = 131/302 (43%), Gaps = 11/302 (3%)
 Frame = -2

Query: 934  KLWKLQSLPRIRLFIWKLIQKALPTSSRLAAHNPEVSPECQMCNNQAMEKENHLFRTCPF 755
            ++W L  +P+++ F+W+ + +AL T+ RL      + P C  C+ +  E  NH   TCPF
Sbjct: 161  RIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRE-NESINHALFTCPF 219

Query: 754  ARAVWFGYSLDAVNSRINTDTISK---WVYLWIADQNFSQFREQIAI-IIWFIWKYRYEV 587
            A   W       + +++ ++   +    +  ++ D   S F + + + +IW IWK R  V
Sbjct: 220  ATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNV 279

Query: 586  VFRKTIPDPASLIQQIK------MFIQSSVIKEETKSQGIQKTKIPIHVWNNIRSDWI-I 428
            VF K    P+  +   K      +    S  K  + ++ I + KI    W N  + ++  
Sbjct: 280  VFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIE---WRNPPATYVKC 336

Query: 427  FIDASYKKENLSMGYAFILYSADQEAFLHISAGSDWASSTIHAEAKALLSALNWLENNIL 248
              DA +  + L     +I+ +         S      S+ + AE KALL+AL        
Sbjct: 337  NFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGY 396

Query: 247  SSVCIVTDCKLLLDSITKKDADASWVAENTIKEAISLLDKLPQAQVKFINRDYNAAADSV 68
            + V +  DC+ L++ I      +S    N +++     +K    Q  FI R  N  A  +
Sbjct: 397  TQVFMEGDCQTLINLINGISFHSS--LANHLEDISFWANKFASIQFGFIRRKGNKLAHVL 454

Query: 67   AK 62
            AK
Sbjct: 455  AK 456


>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
            gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
            thaliana] gi|7269807|emb|CAB79667.1| putative protein
            [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
            putative reverse transcriptase/RNA-dependent DNA
            polymerase [Arabidopsis thaliana]
            gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
            [Arabidopsis thaliana]
          Length = 575

 Score = 89.7 bits (221), Expect = 9e-16
 Identities = 74/303 (24%), Positives = 140/303 (46%), Gaps = 8/303 (2%)
 Frame = -2

Query: 940  WKKLWKLQSLPRIRLFIWKLIQKALPTSSRLAAHNPEVSPECQMCNNQAMEKENHLFRTC 761
            ++K+WK Q+ P+I+ F+WK +  +LP +  LA  +      C  C +   E  NHL   C
Sbjct: 254  YQKIWKSQTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPS-CKETVNHLLFKC 312

Query: 760  PFARAVWFGYSLDAVNSRINTDTI---SKWVY-LWIADQNFSQFREQIAIIIWFIWKYRY 593
             FAR  W   S+         D+I     WV+ L   +  + +  + +  ++W +WK R 
Sbjct: 313  TFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRN 372

Query: 592  EVVFRKTIPDPASLIQQIKMFIQSSVIKEETKSQGI--QKTKIPIHVWNNIRSDWI-IFI 422
            E+VFR    +   ++++ +  ++   I+ E +S G   Q  +     W      W+    
Sbjct: 373  ELVFRGREFNAQEVLRRAEDDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNT 432

Query: 421  DASYKKENLSMGYAFILYSADQEAFLHISAGSDWASSTIHAEAKALLSALNWLENNILSS 242
            DA++ ++N   G  ++L +   E     +       S + AE +A+  A+  L     + 
Sbjct: 433  DATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNY 492

Query: 241  VCIVTDCKLLLDSITKKDADASWVA-ENTIKEAISLLDKLPQAQVKFINRDYNAAADSVA 65
            V   +D ++L++ +     D  W + + TI++   LL +  + +  FI R+ N  A+ VA
Sbjct: 493  VIFESDSQVLIEILNN---DEIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVA 549

Query: 64   KEA 56
            +E+
Sbjct: 550  RES 552


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1750

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 73/302 (24%), Positives = 131/302 (43%), Gaps = 11/302 (3%)
 Frame = -2

Query: 934  KLWKLQSLPRIRLFIWKLIQKALPTSSRLAAHNPEVSPECQMCNNQAMEKENHLFRTCPF 755
            ++W L  +P+++ F+W+ + +AL T+ RL      + P C  C+ +  E  NH   TCPF
Sbjct: 1427 RIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRE-NESINHALFTCPF 1485

Query: 754  ARAVWFGYSLDAVNSRINTDTISK---WVYLWIADQNFSQFREQIAI-IIWFIWKYRYEV 587
            A   W       + +++ ++   +    +  ++ D   S F + + + +IW IWK R  V
Sbjct: 1486 ATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWKARNNV 1545

Query: 586  VFRKTIPDPASLIQQIK------MFIQSSVIKEETKSQGIQKTKIPIHVWNNIRSDWI-I 428
            VF K    P+  +   K      +    S  K  + ++ I + KI    W N  + ++  
Sbjct: 1546 VFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIE---WRNPPATYVKC 1602

Query: 427  FIDASYKKENLSMGYAFILYSADQEAFLHISAGSDWASSTIHAEAKALLSALNWLENNIL 248
              DA +  + L     +I+ +         S      S+ + AE KALL+AL        
Sbjct: 1603 NFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIRGY 1662

Query: 247  SSVCIVTDCKLLLDSITKKDADASWVAENTIKEAISLLDKLPQAQVKFINRDYNAAADSV 68
            + V +  DC+ L++ I      +S    N +++     +K    Q  FI +  N  A  +
Sbjct: 1663 TQVFMEGDCQTLINLINGISFHSS--LANHLEDISFWANKFASIQFGFIRKKGNKLAHVL 1720

Query: 67   AK 62
            AK
Sbjct: 1721 AK 1722