BLASTX nr result
ID: Papaver23_contig00026274
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00026274
(1430 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-... 421 e-148
ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-... 382 e-135
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [... 379 e-134
emb|CBI31781.3| unnamed protein product [Vitis vinifera] 410 e-134
ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-... 378 e-134
>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 421 bits (1083), Expect(2) = e-148
Identities = 218/319 (68%), Positives = 251/319 (78%)
Frame = +1
Query: 1 IYAHLDHNFLTASIPTFXXXXXXXXXXNVGHKVGVVKQTETAAIKAHGENKCGPFTRGLS 180
IYAH+DHNFLTASIPTF + G KVGVVKQTETAAIKAHG NK GPF RGLS
Sbjct: 156 IYAHVDHNFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLS 215
Query: 181 ALYTKATLEAAEDMXXXXXXXXXXXCSNYLICVAEKDLLVGGSDKKSEIGGFDVTIGFVA 360
ALYTKATLEAAE++ +NYL+CV EK + V S GGFDV IG VA
Sbjct: 216 ALYTKATLEAAEEVGGGEEECGSY--NNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVA 273
Query: 361 VEVSTGDVIYGEFNDSVMRNALEALILSLCPAEILIGQPLSKQTEKLLLAYAGPTSNVRV 540
VEVSTGDV++GEFND+ MR LEA+ILS+ PAE+L+G PLSKQTEKLLLAYAGP SNVRV
Sbjct: 274 VEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAYAGPASNVRV 333
Query: 541 ERASRDCFKDGGALAEVMSSYENIDESGSANSEEQTTKSLKQEGQCVGIKEVIAMPELAV 720
ER SRDCF DGGALAEVMS YEN+ E+ A+ + T+ ++QE C+ I+ +++MP+LAV
Sbjct: 334 ERTSRDCFSDGGALAEVMSLYENLSENSRADHQVDNTEVMEQENHCLAIEGIMSMPDLAV 393
Query: 721 QALALTIRHLKKFGLQRILLLGASFRPFSSNTEMTLSANALQQLEVLKNSSNGAETDSLL 900
QALALTIRHLK+FGL+RIL +GASFRPFSSN EMTLSANALQQLEVL N S+G+E+ SLL
Sbjct: 394 QALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSANALQQLEVLNNHSDGSESGSLL 453
Query: 901 HLMNHTLTTFGSRLLRHWV 957
H MNHTLT FGSRLLRHWV
Sbjct: 454 HTMNHTLTIFGSRLLRHWV 472
Score = 131 bits (329), Expect(2) = e-148
Identities = 71/132 (53%), Positives = 89/132 (67%), Gaps = 3/132 (2%)
Frame = +3
Query: 1044 VTHPLRDRNSILARLDAVSEIAELMGTKK---DVDGFNNEDDCIEIAQPEVNYVLSSVLR 1214
V+HPL D N I ARLDAVSEI MG+ K + G + D + QPEVNY+LSSVL
Sbjct: 472 VSHPLCDSNMISARLDAVSEIVMSMGSCKASQNFGGIDEGDSDVTYVQPEVNYLLSSVLT 531
Query: 1215 TLGKSPDVQRGITRIFHRTATAAEFITVIHAVLFAGKQLKQLRVEDDDCTSNSKEMIIGS 1394
TLG+SPD+QRG+TRIFHRTATA+EFI+V A+LFAGKQL++L +E+ D + + S
Sbjct: 532 TLGRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRS 591
Query: 1395 XXXXXXXXTASS 1430
TASS
Sbjct: 592 VLLRKLILTASS 603
>ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 382 bits (981), Expect(2) = e-135
Identities = 200/319 (62%), Positives = 233/319 (73%)
Frame = +1
Query: 1 IYAHLDHNFLTASIPTFXXXXXXXXXXNVGHKVGVVKQTETAAIKAHGENKCGPFTRGLS 180
IYAHLDHNF+TASIPTF + G+KVGVVKQTETAAIKAHG NK GPF RGLS
Sbjct: 158 IYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLS 217
Query: 181 ALYTKATLEAAEDMXXXXXXXXXXXCSNYLICVAEKDLLVGGSDKKSEIGGFDVTIGFVA 360
ALYTKATLEAA+D+ SNYL C+ E + V D + E G DV IG VA
Sbjct: 218 ALYTKATLEAAQDLGGAEEGCAGE--SNYLFCLVENSMSVQNVDCRIE-NGVDVKIGMVA 274
Query: 361 VEVSTGDVIYGEFNDSVMRNALEALILSLCPAEILIGQPLSKQTEKLLLAYAGPTSNVRV 540
+E+STGDVIYGE++D+ MRN LEA++LSL PAE+L+G P+SK TEKLLL YAGP NVRV
Sbjct: 275 MEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPALNVRV 334
Query: 541 ERASRDCFKDGGALAEVMSSYENIDESGSANSEEQTTKSLKQEGQCVGIKEVIAMPELAV 720
ER S DCFKDG ALAEVMS YENID++ + Q+ IKE++ MP LA+
Sbjct: 335 ERVSGDCFKDGSALAEVMSLYENIDQNNFTEDNNPEKVLVGQKSNRSAIKEIVNMPNLAL 394
Query: 721 QALALTIRHLKKFGLQRILLLGASFRPFSSNTEMTLSANALQQLEVLKNSSNGAETDSLL 900
QALALTIRHLK+FGL+RI+ L +SFRPFS EMTLS N L QLEVLKN+ +G+ET SLL
Sbjct: 395 QALALTIRHLKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLL 454
Query: 901 HLMNHTLTTFGSRLLRHWV 957
H MNHTLT FGSRLLR W+
Sbjct: 455 HCMNHTLTIFGSRLLRQWI 473
Score = 127 bits (320), Expect(2) = e-135
Identities = 72/134 (53%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Frame = +3
Query: 1044 VTHPLRDRNSILARLDAVSEIAELMGTKK---DVDGFNNEDDCIEIAQPEVNYVLSSVLR 1214
+THPL DRN I+AR +AVSEIA M + K + + E + + +PE+NY+LSSVL
Sbjct: 473 ITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPELNYILSSVLT 532
Query: 1215 TLGKSPDVQRGITRIFHRTATAAEFITVIHAVLFAGKQLKQLRV--EDDDCTSNSKEMII 1388
TLG++PD+QRGITRIFHRTA +EFI VI A+LFAGKQL+Q + EDD+C+S E II
Sbjct: 533 TLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSS---ESII 589
Query: 1389 GSXXXXXXXXTASS 1430
GS +ASS
Sbjct: 590 GSKLLRKLILSASS 603
>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
MSH3, putative [Ricinus communis]
Length = 1100
Score = 379 bits (972), Expect(2) = e-134
Identities = 200/319 (62%), Positives = 238/319 (74%)
Frame = +1
Query: 1 IYAHLDHNFLTASIPTFXXXXXXXXXXNVGHKVGVVKQTETAAIKAHGENKCGPFTRGLS 180
IYAH DHNF+TASIPTF + G+KVGVVKQTETAAIKAHG+NK GPF RGLS
Sbjct: 153 IYAHKDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGDNKAGPFCRGLS 212
Query: 181 ALYTKATLEAAEDMXXXXXXXXXXXCSNYLICVAEKDLLVGGSDKKSEIGGFDVTIGFVA 360
ALYTKATLEAAED+ SNYL CV +K + G GFD IGFVA
Sbjct: 213 ALYTKATLEAAEDVGGREEGCCGE--SNYLCCVVDKSIENGVDS------GFDTRIGFVA 264
Query: 361 VEVSTGDVIYGEFNDSVMRNALEALILSLCPAEILIGQPLSKQTEKLLLAYAGPTSNVRV 540
VE+STGDV+YGEFND +R+ LEA++LSL PAE+L+G PLSKQTEKLLLAYAGP+SNVRV
Sbjct: 265 VEISTGDVVYGEFNDGFLRSGLEAVVLSLMPAELLLGDPLSKQTEKLLLAYAGPSSNVRV 324
Query: 541 ERASRDCFKDGGALAEVMSSYENIDESGSANSEEQTTKSLKQEGQCVGIKEVIAMPELAV 720
ERAS F DGGALAEV+ YEN+ E + + E Q + Q+ + I+ ++ MP+LAV
Sbjct: 325 ERASGHHFNDGGALAEVILLYENMGEHKAEDDENQMMERTHQDISYLAIEGIMNMPDLAV 384
Query: 721 QALALTIRHLKKFGLQRILLLGASFRPFSSNTEMTLSANALQQLEVLKNSSNGAETDSLL 900
QALALTI HLK+FG ++IL LGASFRP +SN EM LSAN LQQLEVL+N+SNG+++ SL
Sbjct: 385 QALALTISHLKQFGFEQILRLGASFRPLTSNVEMNLSANTLQQLEVLRNNSNGSDSGSLF 444
Query: 901 HLMNHTLTTFGSRLLRHWV 957
++MNHTLT GSRLLRHWV
Sbjct: 445 NIMNHTLTISGSRLLRHWV 463
Score = 129 bits (325), Expect(2) = e-134
Identities = 70/132 (53%), Positives = 90/132 (68%), Gaps = 3/132 (2%)
Frame = +3
Query: 1044 VTHPLRDRNSILARLDAVSEIAELMGTKKDVDG---FNNEDDCIEIAQPEVNYVLSSVLR 1214
VTHPL DRN I ARLDAVSEIAE MG+ K + F+ ED + I QP+ ++LS+VL
Sbjct: 463 VTHPLCDRNMISARLDAVSEIAESMGSYKALQNTGDFDEEDSDVAIIQPDFYHLLSTVLE 522
Query: 1215 TLGKSPDVQRGITRIFHRTATAAEFITVIHAVLFAGKQLKQLRVEDDDCTSNSKEMIIGS 1394
LG+SPD+QRGITRIFHRTATA+EFI VI A+L AGKQL++L++E++ + + S
Sbjct: 523 MLGRSPDIQRGITRIFHRTATASEFIAVIQAILIAGKQLRRLQIEEEQNNKRVQAKTVRS 582
Query: 1395 XXXXXXXXTASS 1430
T SS
Sbjct: 583 VLLKKLILTVSS 594
>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
Length = 903
Score = 410 bits (1053), Expect(2) = e-134
Identities = 218/339 (64%), Positives = 251/339 (74%), Gaps = 20/339 (5%)
Frame = +1
Query: 1 IYAHLDHNFLTASIPTFXXXXXXXXXXNVGHKVGVVKQTETAAIKAHGENKCGPFTRGLS 180
IYAH+DHNFLTASIPTF + G KVGVVKQTETAAIKAHG NK GPF RGLS
Sbjct: 24 IYAHVDHNFLTASIPTFRLNVHVRRLVSAGFKVGVVKQTETAAIKAHGSNKLGPFCRGLS 83
Query: 181 ALYTKATLEAAEDMXXXXXXXXXXXCSNYLICVAEKDLLVGGSDKKSEIGGFDVTIGFVA 360
ALYTKATLEAAE++ +NYL+CV EK + V S GGFDV IG VA
Sbjct: 84 ALYTKATLEAAEEVGGGEEECGSY--NNYLVCVVEKGISVENSKDCGVGGGFDVRIGIVA 141
Query: 361 VEVSTGDVIYGEFNDSVMRNALEALILSLCPAEILIGQPLSKQTEKLLLAYAGPTSNVRV 540
VEVSTGDV++GEFND+ MR LEA+ILS+ PAE+L+G PLSKQTEKLLLAYAGP SNVRV
Sbjct: 142 VEVSTGDVVHGEFNDNFMRAGLEAVILSMSPAELLLGYPLSKQTEKLLLAYAGPASNVRV 201
Query: 541 ERASRDCFKDGGALAEVMSSYENIDESGSANSEEQTTKSLKQEGQCVGIKE--------- 693
ER SRDCF DGGALAEVMS YEN+ E+ A+ + T+ ++QE C+ I+
Sbjct: 202 ERTSRDCFSDGGALAEVMSLYENLSENSRADHQVDNTEVMEQENHCLAIEPPTTSYVKFV 261
Query: 694 -----------VIAMPELAVQALALTIRHLKKFGLQRILLLGASFRPFSSNTEMTLSANA 840
+++MP+LAVQALALTIRHLK+FGL+RIL +GASFRPFSSN EMTLSANA
Sbjct: 262 SVHYGSGIALGIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSSNMEMTLSANA 321
Query: 841 LQQLEVLKNSSNGAETDSLLHLMNHTLTTFGSRLLRHWV 957
LQQLEVL N S+G+E+ SLLH MNHTLT FGSRLLRHWV
Sbjct: 322 LQQLEVLNNHSDGSESGSLLHTMNHTLTIFGSRLLRHWV 360
Score = 96.3 bits (238), Expect(2) = e-134
Identities = 57/129 (44%), Positives = 71/129 (55%)
Frame = +3
Query: 1044 VTHPLRDRNSILARLDAVSEIAELMGTKKDVDGFNNEDDCIEIAQPEVNYVLSSVLRTLG 1223
V+HPL D N I ARLDAVSEI MG+ K F G
Sbjct: 360 VSHPLCDSNMISARLDAVSEIVMSMGSCKASQNF-------------------------G 394
Query: 1224 KSPDVQRGITRIFHRTATAAEFITVIHAVLFAGKQLKQLRVEDDDCTSNSKEMIIGSXXX 1403
+SPD+QRG+TRIFHRTATA+EFI+V A+LFAGKQL++L +E+ D + + S
Sbjct: 395 RSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVLL 454
Query: 1404 XXXXXTASS 1430
TASS
Sbjct: 455 RKLILTASS 463
>ref|XP_004168537.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 966
Score = 378 bits (970), Expect(2) = e-134
Identities = 199/319 (62%), Positives = 232/319 (72%)
Frame = +1
Query: 1 IYAHLDHNFLTASIPTFXXXXXXXXXXNVGHKVGVVKQTETAAIKAHGENKCGPFTRGLS 180
IYAHLDHNF+TASIPTF + G+KVGVVKQTETAAIKAHG NK GPF RGLS
Sbjct: 175 IYAHLDHNFMTASIPTFRLNVHVRRLVSAGYKVGVVKQTETAAIKAHGSNKLGPFCRGLS 234
Query: 181 ALYTKATLEAAEDMXXXXXXXXXXXCSNYLICVAEKDLLVGGSDKKSEIGGFDVTIGFVA 360
ALYTKATLEAA+D+ SNYL C+ E + V D + E G DV IG VA
Sbjct: 235 ALYTKATLEAAQDLGGAEEGCAGE--SNYLFCLVENSMSVQNVDCRIE-NGVDVKIGMVA 291
Query: 361 VEVSTGDVIYGEFNDSVMRNALEALILSLCPAEILIGQPLSKQTEKLLLAYAGPTSNVRV 540
+E+STGDVIYGE++D+ MRN LEA++LSL PAE+L+G P+SK TEKLLL YAGP NVRV
Sbjct: 292 MEISTGDVIYGEYDDNFMRNGLEAMLLSLSPAELLLGDPISKPTEKLLLGYAGPALNVRV 351
Query: 541 ERASRDCFKDGGALAEVMSSYENIDESGSANSEEQTTKSLKQEGQCVGIKEVIAMPELAV 720
ER S D FKDG ALAEVMS YENID++ + Q+ IKE++ MP LA+
Sbjct: 352 ERVSGDFFKDGSALAEVMSLYENIDQNNFTEDNSPEKVLVGQKSNRSAIKEIVNMPNLAL 411
Query: 721 QALALTIRHLKKFGLQRILLLGASFRPFSSNTEMTLSANALQQLEVLKNSSNGAETDSLL 900
QALALTIRHLK+FGL+RI+ L +SFRPFS EMTLS N L QLEVLKN+ +G+ET SLL
Sbjct: 412 QALALTIRHLKQFGLERIVSLASSFRPFSCKMEMTLSGNTLTQLEVLKNNDDGSETGSLL 471
Query: 901 HLMNHTLTTFGSRLLRHWV 957
H MNHTLT FGSRLLR W+
Sbjct: 472 HCMNHTLTIFGSRLLRQWI 490
Score = 127 bits (320), Expect(2) = e-134
Identities = 72/134 (53%), Positives = 93/134 (69%), Gaps = 5/134 (3%)
Frame = +3
Query: 1044 VTHPLRDRNSILARLDAVSEIAELMGTKK---DVDGFNNEDDCIEIAQPEVNYVLSSVLR 1214
+THPL DRN I+AR +AVSEIA M + K + + E + + +PE+NY+LSSVL
Sbjct: 490 ITHPLCDRNMIIARQEAVSEIAASMVSSKVSPNNRALDEEYSDVIVIEPELNYILSSVLT 549
Query: 1215 TLGKSPDVQRGITRIFHRTATAAEFITVIHAVLFAGKQLKQLRV--EDDDCTSNSKEMII 1388
TLG++PD+QRGITRIFHRTA +EFI VI A+LFAGKQL+Q + EDD+C+S E II
Sbjct: 550 TLGRAPDIQRGITRIFHRTAAPSEFIAVIQAILFAGKQLQQFHIDEEDDNCSS---ESII 606
Query: 1389 GSXXXXXXXXTASS 1430
GS +ASS
Sbjct: 607 GSKLLRKLILSASS 620