BLASTX nr result
ID: Papaver23_contig00026259
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00026259 (549 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_186954.1| F-box protein [Arabidopsis thaliana] gi|7526377... 56 3e-06 ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata sub... 55 7e-06 >ref|NP_186954.1| F-box protein [Arabidopsis thaliana] gi|75263775|sp|Q9LDJ9.1|FB133_ARATH RecName: Full=F-box protein At3g03040 gi|6714432|gb|AAF26120.1|AC012328_23 unknown protein [Arabidopsis thaliana] gi|6728958|gb|AAF26956.1|AC018363_1 unknown protein [Arabidopsis thaliana] gi|332640374|gb|AEE73895.1| F-box protein [Arabidopsis thaliana] Length = 472 Score = 56.2 bits (134), Expect = 3e-06 Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 10/140 (7%) Frame = +1 Query: 61 IKISNPNLLVFNYT--VME----CNMKNNSIDKLS-SLMDAYIEVLLQPGGS---YSIKR 210 I PNLL F YT V E NMKN S+ +L+ D I+ + P Y + R Sbjct: 226 ISFDTPNLLSFVYTDFVAEDYPLVNMKNLSLARLALRANDDQIKRVRGPSNDLLEYDVVR 285 Query: 211 YNECFDNVRELLSGLASIRSITLPRSTLQILSNALGLLDSLPSFDNLNKLMLTSFRQRDY 390 + F NV +L++G+ +++ + L TL++LS +S+P F+N+ KL++ S R + Sbjct: 286 H---FGNVVKLMNGIQNVQELHLCPDTLELLSVCC---ESMPVFNNVKKLLIYSDEDRGW 339 Query: 391 FQVITYLLQSSPSLESLVID 450 Q + LL++ P LE+L+ + Sbjct: 340 -QAVPVLLRNCPRLETLIFE 358 >ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] gi|297326574|gb|EFH56994.1| F-box family protein [Arabidopsis lyrata subsp. lyrata] Length = 440 Score = 55.1 bits (131), Expect = 7e-06 Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 6/153 (3%) Frame = +1 Query: 10 SLRNFTMRHIY--LPSYSRIKISNPNLLVFNYTVMECNM---KN-NSIDKLSSLMDAYIE 171 SL++F + Y +Y +++ P L N+ + +M KN NS+ S++D E Sbjct: 206 SLKSFRLAFEYSMAGTYFSVEVDAPRLEYLNFNDNQSDMIVVKNLNSL----SMIDIDTE 261 Query: 172 VLLQPGGSYSIKRYNECFDNVRELLSGLASIRSITLPRSTLQILSNALGLLDSLPSFDNL 351 ++ GGS D +R+ L+G++ IR + + + TL++L L +P FDNL Sbjct: 262 FNVKFGGSPLEPEDLRKRDIIRDFLTGISCIRDMIISQRTLEVLY-LYSKLGPIPKFDNL 320 Query: 352 NKLMLTSFRQRDYFQVITYLLQSSPSLESLVID 450 +L R FQ++ L+S P+LE+L++D Sbjct: 321 YRLQAAF--SRSMFQLLLVFLESCPNLENLILD 351