BLASTX nr result

ID: Papaver23_contig00026258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026258
         (705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...   143   4e-32
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   124   2e-26
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   122   5e-26
emb|CAN71342.1| hypothetical protein VITISV_002439 [Vitis vinifera]   112   7e-23
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   111   1e-22

>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score =  143 bits (360), Expect = 4e-32
 Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 2/196 (1%)
 Frame = -3

Query: 700  AQVFHLSYFNYDHRALLIDLEP--KKNFKQRPFRLEAMWVKDSRFLDVVNESWHNPARNN 527
            A V HL +F  DH  + I LEP  + N  +RPFR EA W+  S F D++  SW+      
Sbjct: 625  ASVTHLPFFASDHAPIYIQLEPEVRSNPLRRPFRFEAAWLTHSGFKDLLQASWNTEGETP 684

Query: 526  NQNYFENLDRLQSEAKKWNKNVFGNLDSRINSALVNLKNAQNSFDIFPSDEARNYMTTCL 347
                   L  L+S+ KKWN+ VFG+++ R  S +  +K  Q   +I  +D   +     +
Sbjct: 685  VA-----LAALKSKLKKWNREVFGDVNRRKESLMNEIKVVQELLEINQTDNLLSKEEELI 739

Query: 346  CDYLNLLKMEEIFWRQKSRVEWLKDGDLNTKFFHTSTLVRRRRNSIHMLKDSSGKWLSSE 167
             ++  +L+ EE+ W QKSR +W++ GD NTK+FHT T+VRRRRN I MLK   G W+S +
Sbjct: 740  KEFDVVLEQEEVLWFQKSREKWVELGDRNTKYFHTMTVVRRRRNRIEMLKADDGSWVSQQ 799

Query: 166  SDIEKEIVTHFNSLFN 119
             ++EK  V +++ L++
Sbjct: 800  QELEKMAVDYYSRLYS 815


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  124 bits (310), Expect = 2e-26
 Identities = 70/198 (35%), Positives = 101/198 (51%), Gaps = 2/198 (1%)
 Frame = -3

Query: 703  NAQVFHLSYFNYDHRALLIDLEPKKNFKQRPFRLEAMWVKDSRFLDVVNESWHNPARNNN 524
            N Q+ HL     DHR LL+D  PK   K R FR E MW     + DV+  SW  PA   +
Sbjct: 816  NTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRSWP-PAFGGS 874

Query: 523  --QNYFENLDRLQSEAKKWNKNVFGNLDSRINSALVNLKNAQNSFDIFPSDEARNYMTTC 350
              +++  NL       K W+K  F N   ++   L +++    S    P D A + +   
Sbjct: 875  AMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEKLHQSN---PPD-AHHQINIL 930

Query: 349  LCDYLNLLKMEEIFWRQKSRVEWLKDGDLNTKFFHTSTLVRRRRNSIHMLKDSSGKWLSS 170
                  L   +E++W Q+SRV WLK GD N+ FFH +T+ RR+ N I  LKD  G WL S
Sbjct: 931  TDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNKIVRLKDDHGNWLDS 990

Query: 169  ESDIEKEIVTHFNSLFNS 116
            E+D+  + + +F +L+ S
Sbjct: 991  EADVALQFLDYFTALYQS 1008


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  122 bits (307), Expect = 5e-26
 Identities = 64/168 (38%), Positives = 98/168 (58%)
 Frame = -3

Query: 622 KQRPFRLEAMWVKDSRFLDVVNESWHNPARNNNQNYFENLDRLQSEAKKWNKNVFGNLDS 443
           ++RPFR EA W+    F +++  SW     +   +    L+RL+ + KKWNK VFGN+  
Sbjct: 51  RRRPFRFEAAWLSHEGFKELLTASW-----DTGLSTPVALNRLRWQLKKWNKEVFGNIHV 105

Query: 442 RINSALVNLKNAQNSFDIFPSDEARNYMTTCLCDYLNLLKMEEIFWRQKSRVEWLKDGDL 263
           R    + +LK  Q+  ++  +D+      T L ++  LL  EE  W QKSR + L  GD 
Sbjct: 106 RKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEETLWFQKSREKLLALGDR 165

Query: 262 NTKFFHTSTLVRRRRNSIHMLKDSSGKWLSSESDIEKEIVTHFNSLFN 119
           NT FFHTST++RRRRN I MLKDS  +W++ +  +EK  + ++  L++
Sbjct: 166 NTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLYS 213


>emb|CAN71342.1| hypothetical protein VITISV_002439 [Vitis vinifera]
          Length = 860

 Score =  112 bits (280), Expect = 7e-23
 Identities = 73/196 (37%), Positives = 106/196 (54%), Gaps = 5/196 (2%)
 Frame = -3

Query: 670 YDHRALLIDLEPKKNFKQRPFRLEAMWVKDSRFLDVVNESWHNPARNNNQNYF--ENLDR 497
           +DH  +L+D    +  K  PFR E MW+K   F+D + E W +       ++   + L  
Sbjct: 185 FDHCPILLDCGGMRTGKN-PFRFENMWLKVEGFMDKMKEWWLSYNYRGKPSFVLAKKLQA 243

Query: 496 LQSEAKKWNKNVFGNLDSRINSALVNLKNAQNSFDIFPS--DEARNYMTTCLCDYLNLLK 323
           L+ + KKWNK   GN+  R ++ L  L N  +S +   S  +E R+       ++ +   
Sbjct: 244 LKYDLKKWNKETIGNVSVRKDATLEEL-NYWDSLERLGSLSEEDRSSQQIARDEFSHCAI 302

Query: 322 MEEIFWRQKSRVEWLKDGDLNTKFFHTSTLVRRRRNSIHMLKDSSGKWLSSESDIEKEIV 143
           +EEI WRQKSR  WLK+GD NTKFF+  T  RRRRN I+ L    G WL  E ++++ I 
Sbjct: 303 LEEISWRQKSRALWLKEGDNNTKFFYRMTNARRRRNFINSL-TVRGVWLVKEEELKEGIG 361

Query: 142 THFNSLFNS-TVSRLD 98
           ++F SLF    V RLD
Sbjct: 362 SYFKSLFEEPQVRRLD 377


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  111 bits (278), Expect = 1e-22
 Identities = 60/198 (30%), Positives = 98/198 (49%)
 Frame = -3

Query: 703 NAQVFHLSYFNYDHRALLIDLEPKKNFKQRPFRLEAMWVKDSRFLDVVNESWHNPARNNN 524
           + +V HL     DH  LLI        +  PFR + +W     F +V+ E+W +    ++
Sbjct: 213 DTKVIHLPRTFSDHCPLLILFNENPRSESFPFRCKEVWAYHPDFTNVIEETWGS----HH 268

Query: 523 QNYFENLDRLQSEAKKWNKNVFGNLDSRINSALVNLKNAQNSFDIFPSDEARNYMTTCLC 344
            +Y    D   S  K W+K VFG++  +    L  L   Q S  I PS          L 
Sbjct: 269 NSYVAARDLFLSSVKSWSKYVFGSIFQKKKRILARLGGIQKSLSIHPSVFLSKLEIDLLV 328

Query: 343 DYLNLLKMEEIFWRQKSRVEWLKDGDLNTKFFHTSTLVRRRRNSIHMLKDSSGKWLSSES 164
           +   L K E +FW QK+ ++  K GD+NTK+FHT   +R  +  I  LK+ +  W+S+  
Sbjct: 329 ELNELSKQERVFWAQKAGIDRAKLGDMNTKYFHTLAKIRTCKRKISCLKNDNHDWVSNNE 388

Query: 163 DIEKEIVTHFNSLFNSTV 110
           D++K +++HF  +F +++
Sbjct: 389 DLKKMMMSHFEKIFTTSM 406


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