BLASTX nr result

ID: Papaver23_contig00026222 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026222
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004168526.1| PREDICTED: DNA-directed RNA polymerase III s...   338   3e-91
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...   338   3e-91
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   338   3e-91
emb|CBI35070.3| unnamed protein product [Vitis vinifera]              334   5e-90
ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...   334   5e-90

>ref|XP_004168526.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc2-like, partial
            [Cucumis sativus]
          Length = 750

 Score =  338 bits (867), Expect = 3e-91
 Identities = 160/173 (92%), Positives = 168/173 (97%)
 Frame = +1

Query: 1    SRHGQKGVCGTIVQQEDFPFSERGIFPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRF 180
            SRHGQKGVCGTIVQQEDFPFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRF
Sbjct: 523  SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 582

Query: 181  HYGSAFGEPSGHADTVEAISKTLVDKGFSYNGKDFLYSGITGSPLQAYIFMGPIYYQKLK 360
            HYGSAFGEPSGHAD V+AIS+TL+ +GFSYNGKDFLYSGITG PLQAYIFMGPIYYQKLK
Sbjct: 583  HYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 642

Query: 361  HMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIYE 519
            HMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLIYE
Sbjct: 643  HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYE 695


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score =  338 bits (867), Expect = 3e-91
 Identities = 160/173 (92%), Positives = 168/173 (97%)
 Frame = +1

Query: 1    SRHGQKGVCGTIVQQEDFPFSERGIFPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRF 180
            SRHGQKGVCGTIVQQEDFPFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRF
Sbjct: 915  SRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 974

Query: 181  HYGSAFGEPSGHADTVEAISKTLVDKGFSYNGKDFLYSGITGSPLQAYIFMGPIYYQKLK 360
            HYGSAFGEPSGHAD V+AIS+TL+ +GFSYNGKDFLYSGITG PLQAYIFMGPIYYQKLK
Sbjct: 975  HYGSAFGEPSGHADKVDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKLK 1034

Query: 361  HMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIYE 519
            HMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLIYE
Sbjct: 1035 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYE 1087


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  338 bits (867), Expect = 3e-91
 Identities = 159/173 (91%), Positives = 169/173 (97%)
 Frame = +1

Query: 1    SRHGQKGVCGTIVQQEDFPFSERGIFPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRF 180
            SRHGQKGVCGTI+QQEDFPFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRF
Sbjct: 896  SRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 955

Query: 181  HYGSAFGEPSGHADTVEAISKTLVDKGFSYNGKDFLYSGITGSPLQAYIFMGPIYYQKLK 360
            HYGSAFGEPSGHADTVEAIS+TLV++GFSYNGKD +YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 956  HYGSAFGEPSGHADTVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLK 1015

Query: 361  HMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIYE 519
            HMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+E
Sbjct: 1016 HMVLDKMHARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFE 1068


>emb|CBI35070.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  334 bits (856), Expect = 5e-90
 Identities = 158/173 (91%), Positives = 166/173 (95%)
 Frame = +1

Query: 1   SRHGQKGVCGTIVQQEDFPFSERGIFPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRF 180
           SRHGQKGVCGTI+QQEDFPFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRF
Sbjct: 218 SRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 277

Query: 181 HYGSAFGEPSGHADTVEAISKTLVDKGFSYNGKDFLYSGITGSPLQAYIFMGPIYYQKLK 360
           HYGSAFGEPSGHAD VE ISKTLV  GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 278 HYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLK 337

Query: 361 HMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIYE 519
           HMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+E
Sbjct: 338 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFE 390


>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score =  334 bits (856), Expect = 5e-90
 Identities = 158/173 (91%), Positives = 166/173 (95%)
 Frame = +1

Query: 1    SRHGQKGVCGTIVQQEDFPFSERGIFPDLIMNPHGFPSRMTIGKMIELLGGKAGVSCGRF 180
            SRHGQKGVCGTI+QQEDFPFSERGI PDLIMNPHGFPSRMT+GKMIELLGGKAGVSCGRF
Sbjct: 899  SRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRF 958

Query: 181  HYGSAFGEPSGHADTVEAISKTLVDKGFSYNGKDFLYSGITGSPLQAYIFMGPIYYQKLK 360
            HYGSAFGEPSGHAD VE ISKTLV  GFSY+GKDF+YSGITG PLQAYIFMGPIYYQKLK
Sbjct: 959  HYGSAFGEPSGHADKVETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLK 1018

Query: 361  HMVLDKMHARGRGPRVMLTRQPTEGRSRDGGLRLGEMERDCLIAYGASMLIYE 519
            HMVLDKMHARG GPRVMLTRQPTEGR+R+GGLR+GEMERDCLIAYGASMLI+E
Sbjct: 1019 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFE 1071


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