BLASTX nr result
ID: Papaver23_contig00026127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00026127
(652 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003556332.1| PREDICTED: structural maintenance of chromos... 90 4e-22
ref|XP_002272410.1| PREDICTED: structural maintenance of chromos... 93 5e-17
ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabid... 92 6e-17
ref|XP_002871691.1| structural maintenance of chromosomes family... 92 1e-16
gb|EEC68394.1| hypothetical protein OsI_36551 [Oryza sativa Indi... 85 1e-14
>ref|XP_003556332.1| PREDICTED: structural maintenance of chromosomes protein 5-like
[Glycine max]
Length = 1059
Score = 90.1 bits (222), Expect(2) = 4e-22
Identities = 47/84 (55%), Positives = 62/84 (73%)
Frame = +1
Query: 19 KSILSQDADD*DFLVRGL*PYDVHVLNYTGGRGNDRRPFKPSDEMLQLGVYSRLDQIFD* 198
KS ++QD+ D D L + L +DV+VLNYTGG G R PF+ S++ LG+YSRLDQIFD
Sbjct: 483 KSFITQDSGDRDLLAKHLRFFDVNVLNYTGGDGPQREPFEISEDKRALGIYSRLDQIFDA 542
Query: 199 PGAVK*VAISQS*LEFSYIGNQKA 270
P AVK V ISQ L++SYIG++K+
Sbjct: 543 PIAVKEVLISQFNLDYSYIGSEKS 566
Score = 40.4 bits (93), Expect(2) = 4e-22
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = +2
Query: 281 VPPLGIKDLWTQDNHYRWTNSRYGNIYPQVLIQ 379
V LGI D WT +NHY W+ SRY N V+ Q
Sbjct: 573 VRKLGILDFWTPENHYHWSKSRYANYESAVVNQ 605
>ref|XP_002272410.1| PREDICTED: structural maintenance of chromosomes protein 5 [Vitis
vinifera] gi|297736324|emb|CBI24962.3| unnamed protein
product [Vitis vinifera]
Length = 1051
Score = 92.8 bits (229), Expect = 5e-17
Identities = 74/209 (35%), Positives = 103/209 (49%), Gaps = 3/209 (1%)
Frame = +1
Query: 19 KSILSQDADD*DFLVRGL*PYDVHVLNYTGGRGNDRRPFKPSDEMLQLGVYSRLDQIFD* 198
KS ++QD DD DFLV+ L +DV VLNY + PF+ S+EM +LG+ SRLDQ+FD
Sbjct: 482 KSFITQDPDDRDFLVKNLRLFDVPVLNYVRNEDRHKEPFQISEEMRKLGISSRLDQVFDS 541
Query: 199 PGAVK*VAISQS*LEFSYIGNQKAG*LGPPTWY*GSLD---SRQSLPMDQL*IR*HISAS 369
P AVK V SQ LE SYIG+++ G LD H+SA
Sbjct: 542 PDAVKEVLTSQFALEHSYIGSRETDQKADEVSKLGILDFWTPENHYRWSVSRYGGHVSAI 601
Query: 370 ADTVSASRLFLSGMYLKAFCRERTNWRMKQLHFEGSVYDINESTKVTKTICDCFCSSGPF 549
+ V+ SRL + E R K+ E + D+ E+ K + I
Sbjct: 602 VEPVARSRL----LVCSTDTGEIERLRSKKKELEEIIDDLEENFK-SLQIEQRLLEDEAA 656
Query: 550 HLFIP*EGIDNMIRLEKRKRCKLENCINK 636
L E I N ++LEKRKR ++EN +++
Sbjct: 657 KLHKQREEIINTVQLEKRKRREMENRVSQ 685
>ref|NP_197096.1| structural maintenance of chromosomes 5 [Arabidopsis thaliana]
gi|9755638|emb|CAC01791.1| putative protein [Arabidopsis
thaliana] gi|332004841|gb|AED92224.1| structural
maintenance of chromosomes 5 [Arabidopsis thaliana]
Length = 1053
Score = 92.4 bits (228), Expect = 6e-17
Identities = 76/205 (37%), Positives = 102/205 (49%), Gaps = 3/205 (1%)
Frame = +1
Query: 19 KSILSQDADD*DFLVRGL*PYDVHVLNYTGGRGNDRRPFKPSDEMLQLGVYSRLDQIFD* 198
KS ++QD +D D LV+ L +DV VLNY G GN + PF SD+M LG+++RLDQIFD
Sbjct: 482 KSFITQDPEDRDLLVKNLKRFDVPVLNYVGNSGNQKAPFHISDQMRSLGIHARLDQIFDA 541
Query: 199 PGAVK*VAISQS*LEFSYIGNQKAG*LGPPTWY*GSLD---SRQSLPMDQL*IR*HISAS 369
P AVK V SQ LE SYIG++ + G D H SAS
Sbjct: 542 PDAVKEVLNSQFGLEDSYIGSKITDQRAEEVYKLGIKDFWTPDNHYRWSSSRYGGHSSAS 601
Query: 370 ADTVSASRLFLSGMYLKAFCRERTNWRMKQLHFEGSVYDINESTKVTKTICDCFCSSGPF 549
D+V SRL L G+ + E R ++ E S+ + E+ K +T
Sbjct: 602 VDSVYQSRLLLCGVDV----GELEKLRSRKEELEDSILFMEETHKSLQTE-QRRLEEEAA 656
Query: 550 HLFIP*EGIDNMIRLEKRKRCKLEN 624
L E I N+ LEK+KR +LE+
Sbjct: 657 KLHKEREEIVNVSYLEKKKRRELES 681
>ref|XP_002871691.1| structural maintenance of chromosomes family protein [Arabidopsis
lyrata subsp. lyrata] gi|297317528|gb|EFH47950.1|
structural maintenance of chromosomes family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 1052
Score = 91.7 bits (226), Expect = 1e-16
Identities = 76/209 (36%), Positives = 106/209 (50%), Gaps = 7/209 (3%)
Frame = +1
Query: 19 KSILSQDADD*DFLVRGL*PYDVHVLNYTGGRGNDRRPFKPSDEMLQLGVYSRLDQIFD* 198
KS ++QD +D D LVR L +DV VLNY G+ + PF SD+M LG+++RLDQIFD
Sbjct: 482 KSFVTQDPEDRDLLVRNLKRFDVPVLNYVSAGGSQKAPFHISDQMRSLGIHARLDQIFDA 541
Query: 199 PGAVK*VAISQS*LEFSYIGN-------QKAG*LGPPTWY*GSLDSRQSLPMDQL*IR*H 357
P A+K V SQ L+ SYIG+ ++ LG ++ R S H
Sbjct: 542 PDAIKEVLTSQFGLDDSYIGSKITDQRAEEVSKLGITDFWTPDNHYRWSSSR----YGGH 597
Query: 358 ISASADTVSASRLFLSGMYLKAFCRERTNWRMKQLHFEGSVYDINESTKVTKTICDCFCS 537
SAS D+V SRL L G+ + E N R ++ E S+ + E+ K +T
Sbjct: 598 SSASVDSVYQSRLLLCGVDV----GELENLRSRKEELEDSISFMEETHKSLQTE-QRLLE 652
Query: 538 SGPFHLFIP*EGIDNMIRLEKRKRCKLEN 624
L E I N+ LEK+KR +LE+
Sbjct: 653 EEAAKLHKEREEIVNVSHLEKKKRRELES 681
>gb|EEC68394.1| hypothetical protein OsI_36551 [Oryza sativa Indica Group]
Length = 923
Score = 85.1 bits (209), Expect = 1e-14
Identities = 58/160 (36%), Positives = 81/160 (50%), Gaps = 3/160 (1%)
Frame = +1
Query: 19 KSILSQDADD*DFLVRGL*PYDVHVLNYTGGRGNDRRPFKPSDEMLQLGVYSRLDQIFD* 198
KS ++QDA D D LVR YD+ VLNY G +G PF + EM Q+G+YSRLDQ+F+
Sbjct: 422 KSFITQDASDRDLLVRQFKKYDIPVLNYMGDKGMRTEPFNITMEMQQVGIYSRLDQVFEA 481
Query: 199 PGAVK*VAISQS*LEFSYIGNQKAG*LGPPTWY*GSLD---SRQSLPMDQL*IR*HISAS 369
P AVK V ISQ+ L+ SY+G + G D + H+SA
Sbjct: 482 PPAVKDVLISQAKLDHSYVGTDETQNRADDVPKLGMSDFWTPNNHYRWSRSRYGGHLSAL 541
Query: 370 ADTVSASRLFLSGMYLKAFCRERTNWRMKQLHFEGSVYDI 489
D V+ SR F+ + + R R+ + EG V ++
Sbjct: 542 VDDVNPSRYFMGNLDVGDIERLRSQKDKHTENIEGMVEEL 581