BLASTX nr result

ID: Papaver23_contig00026122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026122
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Popu...   214   6e-54
gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Popul...   213   1e-53
ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-li...   212   2e-53
ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-li...   212   2e-53
emb|CBI20795.3| unnamed protein product [Vitis vinifera]              211   6e-53

>ref|XP_002297730.1| hypothetical protein POPTRDRAFT_547794 [Populus trichocarpa]
           gi|254789789|sp|B9GLX8.1|RBR_POPTR RecName:
           Full=Retinoblastoma-related protein
           gi|222844988|gb|EEE82535.1| hypothetical protein
           POPTRDRAFT_547794 [Populus trichocarpa]
          Length = 1035

 Score =  214 bits (545), Expect = 6e-54
 Identities = 102/154 (66%), Positives = 125/154 (81%)
 Frame = -3

Query: 471 DQNGLTLCRILKATKLNVKDFFKELPQFLLKSGPVISKLYGADWEHRLEAKELQANIAHL 292
           D  GLTLC+IL+  KLN+ DFFKELP F++K+GP++S +YGADWE+RLEAKELQAN  HL
Sbjct: 113 DDPGLTLCQILRLAKLNIVDFFKELPHFIVKAGPILSNIYGADWENRLEAKELQANFVHL 172

Query: 291 IVLSKYYKRLYLQFFLTSDDMQSAVACDDKESAVANNACPVSNYHRFGWLLFLALRVHAF 112
            +LS++YKR   + FLTSD      A  DK+ A++N A  VS++HRFGWLLFLALRVHAF
Sbjct: 173 SILSRHYKRACRELFLTSD------ASSDKQPAISNEATHVSDHHRFGWLLFLALRVHAF 226

Query: 111 SRFKDLVTCTNGLVSILAILILHVPVHVRRFSFD 10
           SRFKDLVTCTNGLVS+LA+LI+HVPV  R FSF+
Sbjct: 227 SRFKDLVTCTNGLVSVLAVLIIHVPVRFRNFSFN 260


>gb|AAF61377.1|AF133675_1 retinoblastoma-related protein 1 [Populus tremula x Populus
           tremuloides]
          Length = 1035

 Score =  213 bits (542), Expect = 1e-53
 Identities = 102/154 (66%), Positives = 125/154 (81%)
 Frame = -3

Query: 471 DQNGLTLCRILKATKLNVKDFFKELPQFLLKSGPVISKLYGADWEHRLEAKELQANIAHL 292
           D  GLTLC+IL+  KLN+ DFFKELP F++K+GP++S +YGADWE+RLEAKELQAN  HL
Sbjct: 113 DDPGLTLCQILRLAKLNIVDFFKELPHFIVKAGPILSNIYGADWENRLEAKELQANFVHL 172

Query: 291 IVLSKYYKRLYLQFFLTSDDMQSAVACDDKESAVANNACPVSNYHRFGWLLFLALRVHAF 112
            +LS++YKR   + FLTSD      A  DK+ A++N A  VS++HRFGWLLFLALRVHAF
Sbjct: 173 SILSRHYKRACRELFLTSD------ASSDKQPAISNEATHVSDHHRFGWLLFLALRVHAF 226

Query: 111 SRFKDLVTCTNGLVSILAILILHVPVHVRRFSFD 10
           SRFKDLVTCTNGLVS+LA+LI+HVPV  R FSF+
Sbjct: 227 SRFKDLVTCTNGLVSVLAVLIIHVPVCFRNFSFN 260


>ref|XP_004157544.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1125

 Score =  212 bits (540), Expect = 2e-53
 Identities = 107/157 (68%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
 Frame = -3

Query: 471 DQNGLTLCRILKATKLNVKDFFKELPQFLLKSGPVISKLYGADWEHRLEAKELQANIAHL 292
           + N  TLC IL+  KLN+ +FFKELPQF++K+GPV+S LYGADWE+RLEAKELQAN  HL
Sbjct: 202 ENNSFTLCHILRVCKLNIVEFFKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHL 261

Query: 291 IVLSKYYKRLYLQFFLTSDDMQSAVACDDKESAVANNACPVSNYHRFGWLLFLALRVHAF 112
            +LSKYYKR+Y +FF T+D      A  +K+SA++     +S+YHRFGWLLFLALRVHAF
Sbjct: 262 SLLSKYYKRVYREFFSTND------ANVEKQSAISCPTGYLSDYHRFGWLLFLALRVHAF 315

Query: 111 SRFKDLVTCTNGLVSILAILILHVPVHVRRFS-FDSE 4
           SRFKDLVTCTNGLVSILAILILHVPVH R F+  DSE
Sbjct: 316 SRFKDLVTCTNGLVSILAILILHVPVHFRNFNILDSE 352


>ref|XP_004142479.1| PREDICTED: retinoblastoma-related protein-like [Cucumis sativus]
          Length = 1024

 Score =  212 bits (540), Expect = 2e-53
 Identities = 107/157 (68%), Positives = 127/157 (80%), Gaps = 1/157 (0%)
 Frame = -3

Query: 471 DQNGLTLCRILKATKLNVKDFFKELPQFLLKSGPVISKLYGADWEHRLEAKELQANIAHL 292
           + N  TLC IL+  KLN+ +FFKELPQF++K+GPV+S LYGADWE+RLEAKELQAN  HL
Sbjct: 101 ENNSFTLCHILRVCKLNIVEFFKELPQFVVKAGPVLSNLYGADWENRLEAKELQANFVHL 160

Query: 291 IVLSKYYKRLYLQFFLTSDDMQSAVACDDKESAVANNACPVSNYHRFGWLLFLALRVHAF 112
            +LSKYYKR+Y +FF T+D      A  +K+SA++     +S+YHRFGWLLFLALRVHAF
Sbjct: 161 SLLSKYYKRVYREFFSTND------ANVEKQSAISCPTGYLSDYHRFGWLLFLALRVHAF 214

Query: 111 SRFKDLVTCTNGLVSILAILILHVPVHVRRFS-FDSE 4
           SRFKDLVTCTNGLVSILAILILHVPVH R F+  DSE
Sbjct: 215 SRFKDLVTCTNGLVSILAILILHVPVHFRNFNILDSE 251


>emb|CBI20795.3| unnamed protein product [Vitis vinifera]
          Length = 1006

 Score =  211 bits (536), Expect = 6e-53
 Identities = 103/155 (66%), Positives = 123/155 (79%)
 Frame = -3

Query: 471 DQNGLTLCRILKATKLNVKDFFKELPQFLLKSGPVISKLYGADWEHRLEAKELQANIAHL 292
           D+NG  LC+IL+ +KLN+ DFFKELPQF++K GP++  LYG DWE RLEAKELQAN  HL
Sbjct: 92  DENGFNLCQILRVSKLNIVDFFKELPQFIVKVGPILGNLYGPDWEKRLEAKELQANFVHL 151

Query: 291 IVLSKYYKRLYLQFFLTSDDMQSAVACDDKESAVANNACPVSNYHRFGWLLFLALRVHAF 112
            +LSKYYKR YL+FF TS          DK+S+V + +  VS+YHRFGWLLFLALRVHAF
Sbjct: 152 SILSKYYKRAYLEFFSTSGSNL------DKQSSVISASGYVSDYHRFGWLLFLALRVHAF 205

Query: 111 SRFKDLVTCTNGLVSILAILILHVPVHVRRFSFDS 7
           SRFKDLVTCTNGLVSILAILILHVP+  R F+ ++
Sbjct: 206 SRFKDLVTCTNGLVSILAILILHVPISFRSFTINN 240


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