BLASTX nr result

ID: Papaver23_contig00026118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026118
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37235.3| unnamed protein product [Vitis vinifera]              123   1e-26
ref|NP_194606.1| Tetraspanin family protein [Arabidopsis thalian...   120   2e-25
ref|NP_001190864.1| Tetraspanin family protein [Arabidopsis thal...   120   2e-25
gb|ABK93560.1| unknown [Populus trichocarpa]                          119   3e-25
ref|XP_002301831.1| predicted protein [Populus trichocarpa] gi|1...   119   3e-25

>emb|CBI37235.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  123 bits (309), Expect = 1e-26
 Identities = 65/149 (43%), Positives = 92/149 (61%), Gaps = 2/149 (1%)
 Frame = +2

Query: 2   VSIVIYSVWMLNQWNQHTHDIKXXXXXXXXXXXXXXLFLVTSENVDIIRAQFIDNNLN-F 178
           +SI+ YS+WMLNQWN   H I                FL++        A+  ++ +N F
Sbjct: 25  ISIIFYSLWMLNQWN---HQIPVPSPPAPSPDSSQFPFLMSDT------ARVPEDKINPF 75

Query: 179 DFEAGIVSGFDGD-VSIGFKKIHIPWFIYTTMGIGILFCSVTVIGLIAAESVNSCCLCFY 355
            F A +VSG D + + + F K+  PWFIY+ MG+GI+ C +T IG IAAE++N CCLCFY
Sbjct: 76  AFAADMVSGSDDNGLVLQFIKLPAPWFIYSFMGVGIVVCCITCIGHIAAEAINGCCLCFY 135

Query: 356 SLLNAVLILLEAIMVAFLVLDKQWDKDLP 442
           ++L  +LILLEA ++AF+  D  W+KDLP
Sbjct: 136 TMLTVLLILLEAGLIAFVAFDHHWEKDLP 164


>ref|NP_194606.1| Tetraspanin family protein [Arabidopsis thaliana]
           gi|75266419|sp|Q9SVU4.1|TET20_ARATH RecName:
           Full=Tetraspanin-20 gi|4218121|emb|CAA22975.1| putative
           protein [Arabidopsis thaliana]
           gi|7269732|emb|CAB81465.1| putative protein [Arabidopsis
           thaliana] gi|21554050|gb|AAM63131.1| unknown
           [Arabidopsis thaliana] gi|29029076|gb|AAO64917.1|
           At4g28770 [Arabidopsis thaliana]
           gi|110743049|dbj|BAE99417.1| hypothetical protein
           [Arabidopsis thaliana] gi|332660140|gb|AEE85540.1|
           Tetraspanin family protein [Arabidopsis thaliana]
          Length = 281

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
 Frame = +2

Query: 2   VSIVIYSVWMLNQWNQHTHDIKXXXXXXXXXXXXXXLFLVTSENVDIIRAQFIDNNLN-- 175
           +SI+IYS+WML+Q+N H                        S    II    + ++L   
Sbjct: 26  ISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFSNS----IIEINSVSDSLKNP 81

Query: 176 FDFEAGIVSGFDG-DVSIGFKKIHIP--WFIYTTMGIGILFCSVTVIGLIAAESVNSCCL 346
            DF +GIV G  G D     + + +P  WFIY  M IGIL C VT+IG IAAE++N CCL
Sbjct: 82  IDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCL 141

Query: 347 CFYSLLNAVLILLEAIMVAFLVLDKQWDKDLP 442
           CFYS+L  +LI++EA +V F+V+D+ W+KDLP
Sbjct: 142 CFYSILKTLLIIIEAALVGFIVIDRHWEKDLP 173


>ref|NP_001190864.1| Tetraspanin family protein [Arabidopsis thaliana]
           gi|332660141|gb|AEE85541.1| Tetraspanin family protein
           [Arabidopsis thaliana]
          Length = 325

 Score =  120 bits (300), Expect = 2e-25
 Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 5/152 (3%)
 Frame = +2

Query: 2   VSIVIYSVWMLNQWNQHTHDIKXXXXXXXXXXXXXXLFLVTSENVDIIRAQFIDNNLN-- 175
           +SI+IYS+WML+Q+N H                        S    II    + ++L   
Sbjct: 70  ISIIIYSIWMLDQYNHHVPVDPPPSQPPAASSPDSSYSFSNS----IIEINSVSDSLKNP 125

Query: 176 FDFEAGIVSGFDG-DVSIGFKKIHIP--WFIYTTMGIGILFCSVTVIGLIAAESVNSCCL 346
            DF +GIV G  G D     + + +P  WFIY  M IGIL C VT+IG IAAE++N CCL
Sbjct: 126 IDFVSGIVLGSGGGDSGFNLRSLDLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCL 185

Query: 347 CFYSLLNAVLILLEAIMVAFLVLDKQWDKDLP 442
           CFYS+L  +LI++EA +V F+V+D+ W+KDLP
Sbjct: 186 CFYSILKTLLIIIEAALVGFIVIDRHWEKDLP 217


>gb|ABK93560.1| unknown [Populus trichocarpa]
          Length = 281

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/147 (40%), Positives = 85/147 (57%)
 Frame = +2

Query: 2   VSIVIYSVWMLNQWNQHTHDIKXXXXXXXXXXXXXXLFLVTSENVDIIRAQFIDNNLNFD 181
           +SI+IYS WML+QWN                     L L+       IR   + +++   
Sbjct: 26  ISIIIYSFWMLDQWNNKVPVFPPSAPSPDSSFSSSSLLLLPGSESHSIR-DLVFSDVVPR 84

Query: 182 FEAGIVSGFDGDVSIGFKKIHIPWFIYTTMGIGILFCSVTVIGLIAAESVNSCCLCFYSL 361
           FE G+      D  +   ++  PWFIY+ MG+G++ C +T IG IAAES+N CCLCFY++
Sbjct: 85  FENGL------DFDLNSFQLPAPWFIYSFMGVGVILCCITFIGCIAAESINGCCLCFYTI 138

Query: 362 LNAVLILLEAIMVAFLVLDKQWDKDLP 442
           L  V ILLEA +VAF+ +D++W+KDLP
Sbjct: 139 LKIVFILLEAALVAFIAIDRRWEKDLP 165


>ref|XP_002301831.1| predicted protein [Populus trichocarpa] gi|118482993|gb|ABK93408.1|
           unknown [Populus trichocarpa]
           gi|222843557|gb|EEE81104.1| predicted protein [Populus
           trichocarpa]
          Length = 281

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/147 (40%), Positives = 85/147 (57%)
 Frame = +2

Query: 2   VSIVIYSVWMLNQWNQHTHDIKXXXXXXXXXXXXXXLFLVTSENVDIIRAQFIDNNLNFD 181
           +SI+IYS WML+QWN                     L L+       IR   + +++   
Sbjct: 26  ISIIIYSFWMLDQWNNKVPVFPPSAPSPDSSFSSSSLLLLPGSESHSIR-DLVFSDVVPR 84

Query: 182 FEAGIVSGFDGDVSIGFKKIHIPWFIYTTMGIGILFCSVTVIGLIAAESVNSCCLCFYSL 361
           FE G+      D  +   ++  PWFIY+ MG+G++ C +T IG IAAES+N CCLCFY++
Sbjct: 85  FENGL------DFDLNSFQLPAPWFIYSFMGVGVILCCITFIGCIAAESINGCCLCFYTI 138

Query: 362 LNAVLILLEAIMVAFLVLDKQWDKDLP 442
           L  V ILLEA +VAF+ +D++W+KDLP
Sbjct: 139 LKIVFILLEAALVAFIAIDRRWEKDLP 165


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