BLASTX nr result

ID: Papaver23_contig00026112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026112
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like...   215   5e-54
gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]          212   4e-53
ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2...   209   2e-52
ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thali...   208   6e-52
ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like...   207   9e-52

>ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera]
          Length = 1214

 Score =  215 bits (547), Expect = 5e-54
 Identities = 107/116 (92%), Positives = 112/116 (96%)
 Frame = -1

Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169
           MYLYSLTLQ+ATG+VCA NGNF GGKSQEIVVARGKVLDL+RPDENGKIQTILSVE+FGA
Sbjct: 1   MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEIFGA 60

Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1
           IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKE+N FDKIHQETFGKSG RRIVP
Sbjct: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVP 116


>gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis]
          Length = 1212

 Score =  212 bits (539), Expect = 4e-53
 Identities = 104/116 (89%), Positives = 111/116 (95%)
 Frame = -1

Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169
           MYLY+LTLQ+ATG+VCA NGNF GGKSQEI VARGKVLDL+RPDENGKIQTILSVE+FGA
Sbjct: 1   MYLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLDLLRPDENGKIQTILSVEIFGA 60

Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1
           IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKE+N FDK+HQETFGKSG RRIVP
Sbjct: 61  IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVP 116


>ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1|
           predicted protein [Populus trichocarpa]
          Length = 1213

 Score =  209 bits (532), Expect = 2e-52
 Identities = 103/116 (88%), Positives = 111/116 (95%)
 Frame = -1

Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169
           MYLYSLTLQ+ATG+V A NGNF GGK+QEIVVARGKVLDL+RPDENGK+QT+LSVE+FGA
Sbjct: 1   MYLYSLTLQRATGIVSAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGA 60

Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1
           IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYNKERN FDKIHQETFGKSG RRIVP
Sbjct: 61  IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVP 116


>ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana]
           gi|18410226|ref|NP_567016.1| putative splicing factor
           [Arabidopsis thaliana] gi|7019653|emb|CAB75754.1|
           spliceosomal-like protein [Arabidopsis thaliana]
           gi|7019655|emb|CAB75756.1| spliceosomal-like protein
           [Arabidopsis thaliana] gi|332645831|gb|AEE79352.1|
           splicing factor 3B subunit 3 [Arabidopsis thaliana]
           gi|332645833|gb|AEE79354.1| putative splicing factor
           [Arabidopsis thaliana]
          Length = 1214

 Score =  208 bits (529), Expect = 6e-52
 Identities = 102/116 (87%), Positives = 110/116 (94%)
 Frame = -1

Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169
           MYLYSLTLQ+ATG+VCA NGNF GGK+QEI VARGK+LDL+RPDENGKIQTI SVEVFGA
Sbjct: 1   MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGA 60

Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1
           IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYNKE+N FDK+HQETFGKSG RRIVP
Sbjct: 61  IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVP 116


>ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max]
          Length = 1214

 Score =  207 bits (527), Expect = 9e-52
 Identities = 101/116 (87%), Positives = 110/116 (94%)
 Frame = -1

Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169
           MYLYSLTLQ+ TG++CA NGNF GGKSQEIVVARGKVLDL+RPD+NG+IQTILSVE+FGA
Sbjct: 1   MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA 60

Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1
           IRSLAQFRL G+QKDYIVVGSDSGRIVILEYNKE+N FDKIHQETFGKSG RRIVP
Sbjct: 61  IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVP 116


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