BLASTX nr result
ID: Papaver23_contig00026112
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00026112 (564 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like... 215 5e-54 gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis] 212 4e-53 ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|2... 209 2e-52 ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thali... 208 6e-52 ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like... 207 9e-52 >ref|XP_002282354.1| PREDICTED: splicing factor 3B subunit 3-like [Vitis vinifera] Length = 1214 Score = 215 bits (547), Expect = 5e-54 Identities = 107/116 (92%), Positives = 112/116 (96%) Frame = -1 Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169 MYLYSLTLQ+ATG+VCA NGNF GGKSQEIVVARGKVLDL+RPDENGKIQTILSVE+FGA Sbjct: 1 MYLYSLTLQQATGIVCAINGNFSGGKSQEIVVARGKVLDLLRPDENGKIQTILSVEIFGA 60 Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKE+N FDKIHQETFGKSG RRIVP Sbjct: 61 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVP 116 >gb|AEY85032.1| spliceosomal-like protein [Camellia sinensis] Length = 1212 Score = 212 bits (539), Expect = 4e-53 Identities = 104/116 (89%), Positives = 111/116 (95%) Frame = -1 Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169 MYLY+LTLQ+ATG+VCA NGNF GGKSQEI VARGKVLDL+RPDENGKIQTILSVE+FGA Sbjct: 1 MYLYNLTLQQATGIVCAINGNFSGGKSQEIAVARGKVLDLLRPDENGKIQTILSVEIFGA 60 Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKE+N FDK+HQETFGKSG RRIVP Sbjct: 61 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVP 116 >ref|XP_002312063.1| predicted protein [Populus trichocarpa] gi|222851883|gb|EEE89430.1| predicted protein [Populus trichocarpa] Length = 1213 Score = 209 bits (532), Expect = 2e-52 Identities = 103/116 (88%), Positives = 111/116 (95%) Frame = -1 Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169 MYLYSLTLQ+ATG+V A NGNF GGK+QEIVVARGKVLDL+RPDENGK+QT+LSVE+FGA Sbjct: 1 MYLYSLTLQRATGIVSAINGNFSGGKAQEIVVARGKVLDLLRPDENGKLQTVLSVEIFGA 60 Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1 IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYNKERN FDKIHQETFGKSG RRIVP Sbjct: 61 IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKERNVFDKIHQETFGKSGCRRIVP 116 >ref|NP_567015.1| splicing factor 3B subunit 3 [Arabidopsis thaliana] gi|18410226|ref|NP_567016.1| putative splicing factor [Arabidopsis thaliana] gi|7019653|emb|CAB75754.1| spliceosomal-like protein [Arabidopsis thaliana] gi|7019655|emb|CAB75756.1| spliceosomal-like protein [Arabidopsis thaliana] gi|332645831|gb|AEE79352.1| splicing factor 3B subunit 3 [Arabidopsis thaliana] gi|332645833|gb|AEE79354.1| putative splicing factor [Arabidopsis thaliana] Length = 1214 Score = 208 bits (529), Expect = 6e-52 Identities = 102/116 (87%), Positives = 110/116 (94%) Frame = -1 Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169 MYLYSLTLQ+ATG+VCA NGNF GGK+QEI VARGK+LDL+RPDENGKIQTI SVEVFGA Sbjct: 1 MYLYSLTLQQATGIVCAINGNFSGGKTQEIAVARGKILDLLRPDENGKIQTIHSVEVFGA 60 Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1 IRSLAQFRLTG+QKDYIVVGSDSGRIVILEYNKE+N FDK+HQETFGKSG RRIVP Sbjct: 61 IRSLAQFRLTGAQKDYIVVGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVP 116 >ref|XP_003556541.1| PREDICTED: splicing factor 3B subunit 3-like [Glycine max] Length = 1214 Score = 207 bits (527), Expect = 9e-52 Identities = 101/116 (87%), Positives = 110/116 (94%) Frame = -1 Query: 348 MYLYSLTLQKATGVVCATNGNFIGGKSQEIVVARGKVLDLIRPDENGKIQTILSVEVFGA 169 MYLYSLTLQ+ TG++CA NGNF GGKSQEIVVARGKVLDL+RPD+NG+IQTILSVE+FGA Sbjct: 1 MYLYSLTLQRPTGIICAINGNFSGGKSQEIVVARGKVLDLLRPDDNGRIQTILSVEIFGA 60 Query: 168 IRSLAQFRLTGSQKDYIVVGSDSGRIVILEYNKERNCFDKIHQETFGKSGSRRIVP 1 IRSLAQFRL G+QKDYIVVGSDSGRIVILEYNKE+N FDKIHQETFGKSG RRIVP Sbjct: 61 IRSLAQFRLMGAQKDYIVVGSDSGRIVILEYNKEKNVFDKIHQETFGKSGCRRIVP 116