BLASTX nr result

ID: Papaver23_contig00026009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026009
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]     86   1e-14
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...    85   1e-14
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...    85   1e-14
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]                     85   1e-14
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha...    85   1e-14

>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
          Length = 1048

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
 Frame = +2

Query: 275 SFYPPSEVKYDYYIECQYYLKHGHSAAEYHQITTDYS--HHVQDHYTFTEEFYDDTFEGS 448
           +F+P +     Y  +CQ     GHSA    Q+    S  +  Q    FT           
Sbjct: 259 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPSSPFTP---------- 308

Query: 449 WSPEPEAYAMYIDVG-PSTSNSWLPDSGATRHMTHGLANLNLHSLYDSSDQVKVGNGSDL 625
           W P        + +G P +SN+WL DSGAT H+T    NL+LH  Y   D V V +GS +
Sbjct: 309 WQPRAN-----LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTI 363

Query: 626 SIQHIGSTAFASPSTKLHLYNVLHVLSITKNLFSVHQ 736
            I H GST+ ++ S  L+L+N+L+V +I KNL SV++
Sbjct: 364 PISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 400


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
           gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
 Frame = +2

Query: 275 SFYPPSEVKYDYYIECQYYLKHGHSAAEYHQITTDYS--HHVQDHYTFTEEFYDDTFEGS 448
           +F+P +     Y  +CQ     GHSA    Q+    S  +  Q    FT           
Sbjct: 264 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTP---------- 313

Query: 449 WSPEPEAYAMYIDVG-PSTSNSWLPDSGATRHMTHGLANLNLHSLYDSSDQVKVGNGSDL 625
           W P        + +G P +SN+WL DSGAT H+T    NL+LH  Y   D V V +GS +
Sbjct: 314 WQPRAN-----LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTI 368

Query: 626 SIQHIGSTAFASPSTKLHLYNVLHVLSITKNLFSVHQ 736
            I H GST+ ++ S  L+L+N+L+V +I KNL SV++
Sbjct: 369 PISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 405


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
 Frame = +2

Query: 275 SFYPPSEVKYDYYIECQYYLKHGHSAAEYHQITTDYS--HHVQDHYTFTEEFYDDTFEGS 448
           +F+P +     Y  +CQ     GHSA    Q+    S  +  Q    FT           
Sbjct: 229 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTP---------- 278

Query: 449 WSPEPEAYAMYIDVG-PSTSNSWLPDSGATRHMTHGLANLNLHSLYDSSDQVKVGNGSDL 625
           W P        + +G P +SN+WL DSGAT H+T    NL+LH  Y   D V V +GS +
Sbjct: 279 WQPRAN-----LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTI 333

Query: 626 SIQHIGSTAFASPSTKLHLYNVLHVLSITKNLFSVHQ 736
            I H GST+ ++ S  L+L+N+L+V +I KNL SV++
Sbjct: 334 PISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 370


>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
 Frame = +2

Query: 275 SFYPPSEVKYDYYIECQYYLKHGHSAAEYHQITTDYS--HHVQDHYTFTEEFYDDTFEGS 448
           +F+P +     Y  +CQ     GHSA    Q+    S  +  Q    FT           
Sbjct: 264 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTP---------- 313

Query: 449 WSPEPEAYAMYIDVG-PSTSNSWLPDSGATRHMTHGLANLNLHSLYDSSDQVKVGNGSDL 625
           W P        + +G P +SN+WL DSGAT H+T    NL+LH  Y   D V V +GS +
Sbjct: 314 WQPRAN-----LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTI 368

Query: 626 SIQHIGSTAFASPSTKLHLYNVLHVLSITKNLFSVHQ 736
            I H GST+ ++ S  L+L+N+L+V +I KNL SV++
Sbjct: 369 PISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 405


>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
           gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
           thaliana]
          Length = 1466

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 56/157 (35%), Positives = 80/157 (50%), Gaps = 3/157 (1%)
 Frame = +2

Query: 275 SFYPPSEVKYDYYIECQYYLKHGHSAAEYHQITTDYS--HHVQDHYTFTEEFYDDTFEGS 448
           +F+P +     Y  +CQ     GHSA    Q+    S  +  Q    FT           
Sbjct: 264 NFHPNNNQSKPYLGKCQICGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTP---------- 313

Query: 449 WSPEPEAYAMYIDVG-PSTSNSWLPDSGATRHMTHGLANLNLHSLYDSSDQVKVGNGSDL 625
           W P        + +G P +SN+WL DSGAT H+T    NL+LH  Y   D V V +GS +
Sbjct: 314 WQPRAN-----LALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTI 368

Query: 626 SIQHIGSTAFASPSTKLHLYNVLHVLSITKNLFSVHQ 736
            I H GST+ ++ S  L+L+N+L+V +I KNL SV++
Sbjct: 369 PISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 405


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