BLASTX nr result

ID: Papaver23_contig00026007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00026007
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    54   1e-05

>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 40/138 (28%), Positives = 67/138 (48%)
 Frame = -3

Query: 431 LPCXXXXXSENKEEDHKLSFFDVTENKFHQLNLPSECDGNRVCGSGVSSLGWLLMMGENE 252
           LP      S+++    + +FF ++ NKFH LNLP      R CG   SS GWL+++ +  
Sbjct: 51  LPWLMLPQSQSQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCG---SSHGWLMILDDT- 106

Query: 251 GPKVVNLFNPFTRIXXXXXXXXXXPQPHIELIFDEDEQEDVFAVRVSASGQRYCSLKDVH 72
               + L NP TR             P++ + F+  +    +A+R     +   SL+ + 
Sbjct: 107 --PTILLINPLTRAKLSLPPLSSF--PNV-ISFNYSDIGREYALRNLLGERVTVSLRQMR 161

Query: 71  KFFIEKMILSASPSEEEN 18
             FI K++LS+SP ++ N
Sbjct: 162 DSFIRKVVLSSSPLKDNN 179


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