BLASTX nr result

ID: Papaver23_contig00025993 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025993
         (831 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...   144   3e-32
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   139   1e-30
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ...   133   6e-29
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   131   2e-28
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...   129   8e-28

>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score =  144 bits (362), Expect = 3e-32
 Identities = 97/280 (34%), Positives = 140/280 (50%), Gaps = 18/280 (6%)
 Frame = +2

Query: 44  PHAAVTHLPRIASDHAPILLHTKIMDWQGQKNYKFEHMWLSHPQLKQIVESAWPQQNDSE 223
           P  AV+ L R  SDH P+LL + I+DW G + +KF+ +WLSH    +IVE AW Q  +  
Sbjct: 208 PALAVSILNRSISDHCPLLLQSSIVDW-GPRPFKFQDVWLSHKGCMEIVEKAWIQSKE-- 264

Query: 224 TAINLQLKLITIARILMDWNKETFGHLPTMIKK*TAQIQ-WVQH---------QCATRHG 373
             + L  KL  +   L  WN E+FG++   I    A+IQ W            +  TR  
Sbjct: 265 --LTLMQKLKKVKLDLKTWNSESFGNIDANILLREAEIQKWDSEANSRDLEPEEIKTRAQ 322

Query: 374 VELEYWI-SKKKELRNQHLNLLQCHATYWKQRSRIQWLQSGDNNTTFFHTKATIHRSCNN 550
            +LE W   KKKE+             YW Q+SRI+WL+SGD NT FFH  A+I RS NN
Sbjct: 323 AQLELWEWLKKKEI-------------YWAQQSRIKWLKSGDRNTKFFHICASIRRSKNN 369

Query: 551 I-------QQLQDPQNNWVSDKDQVIQIILDHFTTQYTAPNTIIDEELFEEIAPRLTPTQ 709
           I       ++++DP    +  K++ ++   + FT  +    T  +         +L+ +Q
Sbjct: 370 ISSILLQGKKIEDP----IIIKEEAVKYFKNLFTEDFKERPTFTNLSF-----KKLSESQ 420

Query: 710 CDSLMEEVTMQEIKQALFSINSESSPGPDGYTSKFFKVFW 829
             S+    +  EI +A+ S N   SPGPDG+  KF K  W
Sbjct: 421 AFSISAPFSTTEIDEAVASCNPSKSPGPDGFNFKFIKASW 460


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  139 bits (349), Expect = 1e-30
 Identities = 76/273 (27%), Positives = 129/273 (47%), Gaps = 3/273 (1%)
 Frame = +2

Query: 20   NATMRISNPHAAVTHLPRIASDHAPILLHTKIMDWQGQKNYKFEHMWLSHPQLKQIVESA 199
            N     S P+  + HLP+I SDH P+LL +        + ++FE MW +H +   +++ +
Sbjct: 807  NIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWTTHEEYSDVIQRS 866

Query: 200  WPQQNDSETAINLQLKLITIARILMDWNKETFGHLPTMIKK*TAQIQWVQHQCA---TRH 370
            WP         +    L++  + L  W+KE F +    +    + I+ + HQ       H
Sbjct: 867  WPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEKL-HQSNPPDAHH 925

Query: 371  GVELEYWISKKKELRNQHLNLLQCHATYWKQRSRIQWLQSGDNNTTFFHTKATIHRSCNN 550
             + +         L +Q   L      YW QRSR+ WL+ GD N++FFH      R  N 
Sbjct: 926  QINI---------LTDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQYNK 976

Query: 551  IQQLQDPQNNWVSDKDQVIQIILDHFTTQYTAPNTIIDEELFEEIAPRLTPTQCDSLMEE 730
            I +L+D   NW+  +  V    LD+FT  Y +      EE+ + +   +T      L   
Sbjct: 977  IVRLKDDHGNWLDSEADVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSP 1036

Query: 731  VTMQEIKQALFSINSESSPGPDGYTSKFFKVFW 829
            V++ E+K+A+F + +  +PGPDG++  F++  W
Sbjct: 1037 VSLLEVKKAVFDLGATKAPGPDGFSGIFYQNQW 1069


>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1747

 Score =  133 bits (334), Expect = 6e-29
 Identities = 80/261 (30%), Positives = 126/261 (48%), Gaps = 5/261 (1%)
 Frame = +2

Query: 62   HLPRIASDHAPILLH-----TKIMDWQGQKNYKFEHMWLSHPQLKQIVESAWPQQNDSET 226
            HL  ++SDH P+L       ++  +W+ ++ + FE MWL+H   + +VE  W    +S  
Sbjct: 499  HLVSMSSDHCPLLFENDPPMSRGGNWRRKRRFLFEDMWLTHEGCRGVVERQWLFGVNSVV 558

Query: 227  AINLQLKLITIARILMDWNKETFGHLPTMIKK*TAQIQWVQHQCATRHGVELEYWISKKK 406
                  KL  +A  L  WN+ETFG +   +     ++  +Q Q  T +       I K+ 
Sbjct: 559  G-----KLEQVAGGLKRWNQETFGSVKKKVASLREELDVLQRQPPTSN------IICKRN 607

Query: 407  ELRNQHLNLLQCHATYWKQRSRIQWLQSGDNNTTFFHTKATIHRSCNNIQQLQDPQNNWV 586
            E+      +L+     WKQR+R+ W + GD NT FFH  A      N I  +    N W 
Sbjct: 608  EVECLLDGVLEREELLWKQRARVSWFKCGDRNTQFFHQTAKQRGRSNRICGILGEDNRWR 667

Query: 587  SDKDQVIQIILDHFTTQYTAPNTIIDEELFEEIAPRLTPTQCDSLMEEVTMQEIKQALFS 766
            SD   +  + + +F   +TA    +DE +FE +  R+  T   SL +    +EI+ AL  
Sbjct: 668  SDVTDIGCVFVSYFRNLFTAGGGSMDETIFEAVTSRVDATSKKSLDQVYRREEIELALKD 727

Query: 767  INSESSPGPDGYTSKFFKVFW 829
            +N   SPG DG  ++FF+ FW
Sbjct: 728  MNPSKSPGSDGMPARFFQKFW 748


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  131 bits (330), Expect = 2e-28
 Identities = 78/276 (28%), Positives = 129/276 (46%), Gaps = 6/276 (2%)
 Frame = +2

Query: 20  NATMRISNPHAAVTHLPRIASDHAPILLHTK-----IMDWQGQKNYKFEHMWLSHPQLKQ 184
           N   +I  P + V+HLP+  SDH PI+   K         +  K ++FE MWL   +  +
Sbjct: 207 NDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAATRTKKSKRFRFEAMWLREGESDE 266

Query: 185 IVESAWPQQNDSETAINLQLKLITIARILMDWNKETFGHLPTMIKK*TAQIQWVQHQCAT 364
           +V+  W +  D+       + L   A  L+ W+K+ FGH+         +I+  QHQ   
Sbjct: 267 VVKETWMRGTDAG------INLARTANKLLSWSKQKFGHV-------AKEIRMCQHQMKV 313

Query: 365 RHGVE-LEYWISKKKELRNQHLNLLQCHATYWKQRSRIQWLQSGDNNTTFFHTKATIHRS 541
               E  E  I   + L  +   L +    YW QRSR  W++SGD NT FFH KA+    
Sbjct: 314 LMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDWIKSGDKNTKFFHQKASHREQ 373

Query: 542 CNNIQQLQDPQNNWVSDKDQVIQIILDHFTTQYTAPNTIIDEELFEEIAPRLTPTQCDSL 721
            NN++++++    W  D+D V +    +F   + + N    + +   + P++T      L
Sbjct: 374 RNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEMDPILNIVKPQITDELGTQL 433

Query: 722 MEEVTMQEIKQALFSINSESSPGPDGYTSKFFKVFW 829
                 +E+  AL  ++   +PGPDG  + F++ FW
Sbjct: 434 DAPFRREEVSAALAQMHPNKAPGPDGMNALFYQHFW 469


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score =  129 bits (324), Expect = 8e-28
 Identities = 78/263 (29%), Positives = 140/263 (53%), Gaps = 1/263 (0%)
 Frame = +2

Query: 44  PHAAVTHLPRIASDHAPILLHTKIMDWQGQKNYKFEHMWLSHPQLKQIVESAWPQQNDSE 223
           P   ++ L R  SDH P+LL++ + +W G K +KF++ WLS P+  ++V+  W + +   
Sbjct: 208 PTLKLSLLNRGLSDHCPLLLNSSVRNW-GPKPFKFQNCWLSDPRCMRLVKDTWQKSSP-- 264

Query: 224 TAINLQLKLITIARILMDWNKETFGHLPTMIKK*TAQIQWVQHQCATRHGVELEYWISKK 403
             + L  KL T+ + L DWN++ FG++   IK+   +I  +      R     E  + KK
Sbjct: 265 --MGLVQKLKTVKKDLKDWNEKVFGNIEANIKQLEHEINQLDKISNERDLDSFE--LEKK 320

Query: 404 KELRNQHLNLLQCHATYWKQRSRIQWLQSGDNNTTFFHTKATIHRSCNNIQQLQDPQNNW 583
           K+ +    + ++   +YW Q+SRI+WL+ GD NT FFH  A+I +  N+I  + +   + 
Sbjct: 321 KKAQVDLWSWMKTKESYWSQQSRIKWLKQGDRNTKFFHVVASIRKHRNSITSI-EVNGDK 379

Query: 584 VSDKDQVIQIILDHFTTQYTAPNTIIDEELFEEI-APRLTPTQCDSLMEEVTMQEIKQAL 760
           +S+ +++    + +F   +   +   +  L E +    LT  Q   L+   + +EI +A+
Sbjct: 380 ISEPEKIKLEAMKYFRKAFKEES--YNRPLLEGLDFKHLTEAQSADLIAPFSHEEIDKAV 437

Query: 761 FSINSESSPGPDGYTSKFFKVFW 829
            S +S+ +PGPDG+   F K  W
Sbjct: 438 ASCSSDKAPGPDGFNFTFIKKAW 460


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