BLASTX nr result

ID: Papaver23_contig00025968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025968
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20165.3| unnamed protein product [Vitis vinifera]              223   2e-56
ref|XP_002283388.1| PREDICTED: uncharacterized protein LOC100257...   223   2e-56
dbj|BAB01162.1| unnamed protein product [Arabidopsis thaliana]        217   7e-55
ref|NP_001189942.1| polymerase gamma 1 [Arabidopsis thaliana] gi...   217   7e-55
ref|NP_188690.3| polymerase gamma 1 [Arabidopsis thaliana] gi|30...   217   7e-55

>emb|CBI20165.3| unnamed protein product [Vitis vinifera]
          Length = 1118

 Score =  223 bits (567), Expect = 2e-56
 Identities = 118/192 (61%), Positives = 134/192 (69%), Gaps = 29/192 (15%)
 Frame = +3

Query: 3    KDGSQTLDEEKEFKVPNVDKVIEEGKKVATKFRKIRLHKIGNEIKAEIFTPTGRPSVSGD 182
            KD ++ L  EK FK+PNVDKVIEEGKK  TKFR I L     EI  E+ T +G PSVSGD
Sbjct: 654  KDPNECLPMEKTFKIPNVDKVIEEGKKAPTKFRNITLSSFDVEIPIEMCTASGWPSVSGD 713

Query: 183  VLKVLAGKVTSEY-----------------------------KEDIDVSQYGTAYTAFGE 275
             LK LAGKV++++                              ED D+S YGTAY AFGE
Sbjct: 714  ALKTLAGKVSADFDFIDDAECDFETTAIEKIDEVPGTRGPKESEDTDISAYGTAYAAFGE 773

Query: 276  GKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDDRIHCSLNINTETGRLSARR 455
            G++GR+ACHAIAALCEVC+I+SLISNFILPLQ   ISGK+ RIHCSLNINTETGRLSARR
Sbjct: 774  GQEGRKACHAIAALCEVCSINSLISNFILPLQDGEISGKNGRIHCSLNINTETGRLSARR 833

Query: 456  PNLQNQPALEKD 491
            PNLQNQPALEKD
Sbjct: 834  PNLQNQPALEKD 845


>ref|XP_002283388.1| PREDICTED: uncharacterized protein LOC100257153 [Vitis vinifera]
          Length = 1034

 Score =  223 bits (567), Expect = 2e-56
 Identities = 118/192 (61%), Positives = 134/192 (69%), Gaps = 29/192 (15%)
 Frame = +3

Query: 3    KDGSQTLDEEKEFKVPNVDKVIEEGKKVATKFRKIRLHKIGNEIKAEIFTPTGRPSVSGD 182
            KD ++ L  EK FK+PNVDKVIEEGKK  TKFR I L     EI  E+ T +G PSVSGD
Sbjct: 570  KDPNECLPMEKTFKIPNVDKVIEEGKKAPTKFRNITLSSFDVEIPIEMCTASGWPSVSGD 629

Query: 183  VLKVLAGKVTSEY-----------------------------KEDIDVSQYGTAYTAFGE 275
             LK LAGKV++++                              ED D+S YGTAY AFGE
Sbjct: 630  ALKTLAGKVSADFDFIDDAECDFETTAIEKIDEVPGTRGPKESEDTDISAYGTAYAAFGE 689

Query: 276  GKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDDRIHCSLNINTETGRLSARR 455
            G++GR+ACHAIAALCEVC+I+SLISNFILPLQ   ISGK+ RIHCSLNINTETGRLSARR
Sbjct: 690  GQEGRKACHAIAALCEVCSINSLISNFILPLQDGEISGKNGRIHCSLNINTETGRLSARR 749

Query: 456  PNLQNQPALEKD 491
            PNLQNQPALEKD
Sbjct: 750  PNLQNQPALEKD 761


>dbj|BAB01162.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1088

 Score =  217 bits (553), Expect = 7e-55
 Identities = 120/195 (61%), Positives = 136/195 (69%), Gaps = 36/195 (18%)
 Frame = +3

Query: 15   QTLDEEKEFKVPNVDKVIEEGKKVATKFRKIRLHKIGNE-IKAEIFTPTGRPSVSGDVLK 191
            + L  EK FKVPNVDKVIEEGKK ATKFR I+LH+I +  +  E FT +G PSVSGD LK
Sbjct: 534  EDLPYEKLFKVPNVDKVIEEGKKRATKFRNIKLHRISDRPLPTEKFTASGWPSVSGDTLK 593

Query: 192  VLAGKVTSEY-----------KEDI------------------------DVSQYGTAYTA 266
             LAGKV++EY           +E+I                        D S YGTA+ A
Sbjct: 594  ALAGKVSAEYDYMEGVLDTCLEENIGDDDCISLPDEVVETQHVNTSVESDTSAYGTAFDA 653

Query: 267  FGEGKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDDRIHCSLNINTETGRLS 446
            FG G+ G+EACHAIAALCEVC+IDSLISNFILPLQ S +SGKD R+HCSLNINTETGRLS
Sbjct: 654  FGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLS 713

Query: 447  ARRPNLQNQPALEKD 491
            ARRPNLQNQPALEKD
Sbjct: 714  ARRPNLQNQPALEKD 728


>ref|NP_001189942.1| polymerase gamma 1 [Arabidopsis thaliana] gi|332642872|gb|AEE76393.1|
            polymerase gamma 1 [Arabidopsis thaliana]
          Length = 1049

 Score =  217 bits (553), Expect = 7e-55
 Identities = 120/195 (61%), Positives = 136/195 (69%), Gaps = 36/195 (18%)
 Frame = +3

Query: 15   QTLDEEKEFKVPNVDKVIEEGKKVATKFRKIRLHKIGNE-IKAEIFTPTGRPSVSGDVLK 191
            + L  EK FKVPNVDKVIEEGKK ATKFR I+LH+I +  +  E FT +G PSVSGD LK
Sbjct: 584  EDLPYEKLFKVPNVDKVIEEGKKRATKFRNIKLHRISDRPLPTEKFTASGWPSVSGDTLK 643

Query: 192  VLAGKVTSEY-----------KEDI------------------------DVSQYGTAYTA 266
             LAGKV++EY           +E+I                        D S YGTA+ A
Sbjct: 644  ALAGKVSAEYDYMEGVLDTCLEENIGDDDCISLPDEVVETQHVNTSVESDTSAYGTAFDA 703

Query: 267  FGEGKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDDRIHCSLNINTETGRLS 446
            FG G+ G+EACHAIAALCEVC+IDSLISNFILPLQ S +SGKD R+HCSLNINTETGRLS
Sbjct: 704  FGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLS 763

Query: 447  ARRPNLQNQPALEKD 491
            ARRPNLQNQPALEKD
Sbjct: 764  ARRPNLQNQPALEKD 778


>ref|NP_188690.3| polymerase gamma 1 [Arabidopsis thaliana] gi|30313818|gb|AAO34128.1|
            PolI-like DNA polymerase [Arabidopsis thaliana]
            gi|71013474|dbj|BAE10874.1| PolI-like B DNA polymerase
            [Arabidopsis thaliana] gi|110741933|dbj|BAE98907.1|
            putative DNA polymerase [Arabidopsis thaliana]
            gi|332642871|gb|AEE76392.1| polymerase gamma 1
            [Arabidopsis thaliana]
          Length = 1034

 Score =  217 bits (553), Expect = 7e-55
 Identities = 120/195 (61%), Positives = 136/195 (69%), Gaps = 36/195 (18%)
 Frame = +3

Query: 15   QTLDEEKEFKVPNVDKVIEEGKKVATKFRKIRLHKIGNE-IKAEIFTPTGRPSVSGDVLK 191
            + L  EK FKVPNVDKVIEEGKK ATKFR I+LH+I +  +  E FT +G PSVSGD LK
Sbjct: 569  EDLPYEKLFKVPNVDKVIEEGKKRATKFRNIKLHRISDRPLPTEKFTASGWPSVSGDTLK 628

Query: 192  VLAGKVTSEY-----------KEDI------------------------DVSQYGTAYTA 266
             LAGKV++EY           +E+I                        D S YGTA+ A
Sbjct: 629  ALAGKVSAEYDYMEGVLDTCLEENIGDDDCISLPDEVVETQHVNTSVESDTSAYGTAFDA 688

Query: 267  FGEGKDGREACHAIAALCEVCAIDSLISNFILPLQSSAISGKDDRIHCSLNINTETGRLS 446
            FG G+ G+EACHAIAALCEVC+IDSLISNFILPLQ S +SGKD R+HCSLNINTETGRLS
Sbjct: 689  FGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGSNVSGKDGRVHCSLNINTETGRLS 748

Query: 447  ARRPNLQNQPALEKD 491
            ARRPNLQNQPALEKD
Sbjct: 749  ARRPNLQNQPALEKD 763


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