BLASTX nr result

ID: Papaver23_contig00025865 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025865
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...    94   9e-18
emb|CBI17233.3| unnamed protein product [Vitis vinifera]               94   9e-18
emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]    94   9e-18
ref|XP_002517310.1| ribosome biogenesis protein bms1, putative [...    89   5e-16
ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 ...    88   6e-16

>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis vinifera]
          Length = 1139

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/93 (50%), Positives = 66/93 (70%)
 Frame = -3

Query: 486  PWKISGKTALIKNLFKTDHEIDKFKDAKLWTESGIQGKVEKAAEKMFVDRRRRKDGVLRV 307
            P KI  KTALIKN+F +D EI +F+ A + T SGI+G+V+KAA++   ++ ++K G+ R 
Sbjct: 889  PCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPRE 948

Query: 306  GIAECKVKHRICMQDRIFMRLWKEVKVPGFFNP 208
            GIA C  + RI M D +F+R W EV+VP FFNP
Sbjct: 949  GIARCTFEDRILMSDLVFLRAWTEVEVPCFFNP 981


>emb|CBI17233.3| unnamed protein product [Vitis vinifera]
          Length = 1305

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/93 (50%), Positives = 66/93 (70%)
 Frame = -3

Query: 486  PWKISGKTALIKNLFKTDHEIDKFKDAKLWTESGIQGKVEKAAEKMFVDRRRRKDGVLRV 307
            P KI  KTALIKN+F +D EI +F+ A + T SGI+G+V+KAA++   ++ ++K G+ R 
Sbjct: 1055 PCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPRE 1114

Query: 306  GIAECKVKHRICMQDRIFMRLWKEVKVPGFFNP 208
            GIA C  + RI M D +F+R W EV+VP FFNP
Sbjct: 1115 GIARCTFEDRILMSDLVFLRAWTEVEVPCFFNP 1147


>emb|CAN69949.1| hypothetical protein VITISV_005397 [Vitis vinifera]
          Length = 325

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 47/93 (50%), Positives = 66/93 (70%)
 Frame = -3

Query: 486 PWKISGKTALIKNLFKTDHEIDKFKDAKLWTESGIQGKVEKAAEKMFVDRRRRKDGVLRV 307
           P KI  KTALIKN+F +D EI +F+ A + T SGI+G+V+KAA++   ++ ++K G+ R 
Sbjct: 75  PCKIFKKTALIKNMFTSDLEIARFEGAAVQTASGIRGQVKKAAKEELGNQPKKKGGLPRE 134

Query: 306 GIAECKVKHRICMQDRIFMRLWKEVKVPGFFNP 208
           GIA C  + RI M D +F+R W EV+VP FFNP
Sbjct: 135 GIARCTFEDRILMSDLVFLRAWTEVEVPCFFNP 167


>ref|XP_002517310.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543573|gb|EEF45103.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 284

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 43/93 (46%), Positives = 64/93 (68%)
 Frame = -3

Query: 486 PWKISGKTALIKNLFKTDHEIDKFKDAKLWTESGIQGKVEKAAEKMFVDRRRRKDGVLRV 307
           P KI  KTALI N+F +D E+ +F+ A + T SGI+G+V+KAA++   ++ ++K G  R 
Sbjct: 33  PCKIFKKTALITNMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKKKGGAPRE 92

Query: 306 GIAECKVKHRICMQDRIFMRLWKEVKVPGFFNP 208
           GIA C  + RI M D +F+R W +V+VP F+NP
Sbjct: 93  GIARCTFEDRILMSDIVFLRAWTQVEVPQFYNP 125


>ref|XP_003540688.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Glycine max]
          Length = 1181

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/93 (45%), Positives = 65/93 (69%)
 Frame = -3

Query: 486  PWKISGKTALIKNLFKTDHEIDKFKDAKLWTESGIQGKVEKAAEKMFVDRRRRKDGVLRV 307
            P KI  KTALIK++F +D E+ +F+ A + T SGI+G+V+KAA++   ++ +RK G  + 
Sbjct: 928  PCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQAKRKGGQTKE 987

Query: 306  GIAECKVKHRICMQDRIFMRLWKEVKVPGFFNP 208
            GIA C  + +I M D +F+R W +V+VP F+NP
Sbjct: 988  GIARCTFEDKILMSDIVFLRAWTQVEVPQFYNP 1020


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