BLASTX nr result
ID: Papaver23_contig00025851
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00025851
(603 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containi... 48 2e-13
emb|CBI41008.3| unnamed protein product [Vitis vinifera] 50 3e-11
ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containi... 49 7e-11
emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera] 47 2e-10
emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera] 47 1e-09
>ref|XP_002263756.2| PREDICTED: pentatricopeptide repeat-containing protein
At3g13150-like [Vitis vinifera]
Length = 379
Score = 47.8 bits (112), Expect(4) = 2e-13
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 21/124 (16%)
Frame = +1
Query: 94 LN*SATVGSFK-----CRDSKNFEEL----------------FRSNSSLNQAFCKIVSLD 210
LN TV SF C +SK F+++ S + + AFC++ SLD
Sbjct: 121 LNCERTVVSFNALLSVCVNSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGSLD 180
Query: 211 SALSMLNALE*N*VNPNI*LHSVCS*KDFFGHGRLSDGEMI*ARMKKCNLVPDIECYNAE 390
SALS+L+ +E + P++ + F+ +G +DGE I MKK N+ P++ YNA+
Sbjct: 181 SALSVLDEMEKVGLEPDLITFNTLL-NAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAK 239
Query: 391 G*GI 402
G+
Sbjct: 240 LRGV 243
Score = 35.8 bits (81), Expect(4) = 2e-13
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 474 VYS*NALTERFCEVGNLK*GKRVYNELLSNEFFPTRS 584
V++ N+L + FC GNL+ KR Y+E+ NE P R+
Sbjct: 268 VFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRA 304
Score = 28.5 bits (62), Expect(4) = 2e-13
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
Frame = +3
Query: 3 EILKIQKKDNVSTKDDFAVRITP-----------SKMFDELPELKC 107
+IL+ QK+ N + + FAVR+ K+FDELP+L C
Sbjct: 78 DILEHQKQYNEISTEVFAVRLMTLYGKAGMFEHAHKLFDELPKLNC 123
Score = 27.3 bits (59), Expect(4) = 2e-13
Identities = 9/28 (32%), Positives = 23/28 (82%)
Frame = +2
Query: 389 RVKGLVLVDRLSEAGKLVEELDSTELKP 472
+++G++ +R+SEA +L++E+ ++ +KP
Sbjct: 239 KLRGVISENRMSEAVELIDEMKTSGIKP 266
>emb|CBI41008.3| unnamed protein product [Vitis vinifera]
Length = 379
Score = 49.7 bits (117), Expect(3) = 3e-11
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 16/126 (12%)
Frame = +1
Query: 73 QRCLTNCLN*SATVGSFKCRDSKNFEEL----------------FRSNSSLNQAFCKIVS 204
Q+C + L+ +A +G+ C SK F+++ S + + AFC++ S
Sbjct: 131 QKCERSVLSFNALLGA--CVHSKKFDKIDGFFQELPGNLGVVPDVVSYNIIVNAFCEMGS 188
Query: 205 LDSALSMLNALE*N*VNPNI*LHSVCS*KDFFGHGRLSDGEMI*ARMKKCNLVPDIECYN 384
LDSALS+L+ +E + P++ + F+ +G +DGE I MKK N+ P++ YN
Sbjct: 189 LDSALSVLDEMEKVGLEPDLITFNTLL-NAFYQNGSYADGEKIWDLMKKNNVAPNVRSYN 247
Query: 385 AEG*GI 402
A+ G+
Sbjct: 248 AKLRGV 253
Score = 35.8 bits (81), Expect(3) = 3e-11
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 474 VYS*NALTERFCEVGNLK*GKRVYNELLSNEFFPTRS 584
V++ N+L + FC GNL+ KR Y+E+ NE P R+
Sbjct: 278 VFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRA 314
Score = 27.3 bits (59), Expect(3) = 3e-11
Identities = 9/28 (32%), Positives = 23/28 (82%)
Frame = +2
Query: 389 RVKGLVLVDRLSEAGKLVEELDSTELKP 472
+++G++ +R+SEA +L++E+ ++ +KP
Sbjct: 249 KLRGVISENRMSEAVELIDEMKTSGIKP 276
>ref|XP_003635178.1| PREDICTED: pentatricopeptide repeat-containing protein At1g55890,
mitochondrial-like [Vitis vinifera]
Length = 379
Score = 48.5 bits (114), Expect(3) = 7e-11
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 21/124 (16%)
Frame = +1
Query: 94 LN*SATVGSFK-----CRDSKNFEEL----------------FRSNSSLNQAFCKIVSLD 210
LN TV SF C +SK F+++ S + L AFC++ SLD
Sbjct: 121 LNCERTVMSFNALLSACVNSKKFDKIDGFFQELPGNLGIVPDVVSYNILVNAFCEMGSLD 180
Query: 211 SALSMLNALE*N*VNPNI*LHSVCS*KDFFGHGRLSDGEMI*ARMKKCNLVPDIECYNAE 390
SALS+L+ +E + P++ + F+ +G +DGE I MKK N+ P++ YNA+
Sbjct: 181 SALSVLDEMEKVGLEPDLITFNTLL-NAFYQNGSYADGEKIWDLMKKNNVAPNVRSYNAK 239
Query: 391 G*GI 402
G+
Sbjct: 240 LRGV 243
Score = 35.8 bits (81), Expect(3) = 7e-11
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 474 VYS*NALTERFCEVGNLK*GKRVYNELLSNEFFPTRS 584
V++ N+L + FC GNL+ KR Y+E+ NE P R+
Sbjct: 268 VFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRA 304
Score = 27.3 bits (59), Expect(3) = 7e-11
Identities = 9/28 (32%), Positives = 23/28 (82%)
Frame = +2
Query: 389 RVKGLVLVDRLSEAGKLVEELDSTELKP 472
+++G++ +R+SEA +L++E+ ++ +KP
Sbjct: 239 KLRGVISENRMSEAVELIDEMKTSGIKP 266
>emb|CAN76850.1| hypothetical protein VITISV_005998 [Vitis vinifera]
Length = 340
Score = 47.4 bits (111), Expect(3) = 2e-10
Identities = 28/73 (38%), Positives = 45/73 (61%)
Frame = +1
Query: 184 AFCKIVSLDSALSMLNALE*N*VNPNI*LHSVCS*KDFFGHGRLSDGEMI*ARMKKCNLV 363
AFC++ SLDSALS+L+ +E + P++ + F+ +G +DGE I MKK N+
Sbjct: 133 AFCEMGSLDSALSVLDEMEKVGLEPDLITFNTLL-NAFYQNGSYADGEKIWDLMKKNNVA 191
Query: 364 PDIECYNAEG*GI 402
P++ YNA+ G+
Sbjct: 192 PNVRSYNAKLRGV 204
Score = 35.8 bits (81), Expect(3) = 2e-10
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +3
Query: 474 VYS*NALTERFCEVGNLK*GKRVYNELLSNEFFPTRS 584
V++ N+L + FC GNL+ KR Y+E+ NE P R+
Sbjct: 229 VFTLNSLMKGFCNAGNLEEAKRWYSEIARNELPPVRA 265
Score = 27.3 bits (59), Expect(3) = 2e-10
Identities = 9/28 (32%), Positives = 23/28 (82%)
Frame = +2
Query: 389 RVKGLVLVDRLSEAGKLVEELDSTELKP 472
+++G++ +R+SEA +L++E+ ++ +KP
Sbjct: 200 KLRGVISENRMSEAVELIDEMKTSGIKP 227
>emb|CAN76564.1| hypothetical protein VITISV_029137 [Vitis vinifera]
Length = 449
Score = 46.6 bits (109), Expect(3) = 1e-09
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 21/124 (16%)
Frame = +1
Query: 94 LN*SATVGSFK-----CRDSKNFEEL----------------FRSNSSLNQAFCKIVSLD 210
LN TV SF C +SK F+++ S + L AFC++ SLD
Sbjct: 234 LNCERTVMSFNALLSACVNSKKFDKIDGFFQELPRNLGIVPDVVSYNILVNAFCEMGSLD 293
Query: 211 SALSMLNALE*N*VNPNI*LHSVCS*KDFFGHGRLSDGEMI*ARMKKCNLVPDIECYNAE 390
SALS+L+ +E + P++ + F+ G +DGE I MKK N+ P++ YNA+
Sbjct: 294 SALSVLDEMEKVGLEPDLITFNTLL-NVFYQSGSNADGEKIWDLMKKNNVAPNVRSYNAK 352
Query: 391 G*GI 402
G+
Sbjct: 353 LRGV 356
Score = 33.5 bits (75), Expect(3) = 1e-09
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +3
Query: 474 VYS*NALTERFCEVGNLK*GKRVYNELLSNEFFPTRS 584
V++ N+L + FC GNL+ KR ++E+ NE P R+
Sbjct: 381 VFTLNSLMKGFCNAGNLEEAKRWHSEIAINELPPVRA 417
Score = 26.9 bits (58), Expect(3) = 1e-09
Identities = 9/28 (32%), Positives = 22/28 (78%)
Frame = +2
Query: 389 RVKGLVLVDRLSEAGKLVEELDSTELKP 472
+++G++ +R+SEA L++E+ ++ +KP
Sbjct: 352 KLRGVISENRMSEAVNLIDEMKTSGIKP 379