BLASTX nr result

ID: Papaver23_contig00025847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025847
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30132.3| unnamed protein product [Vitis vinifera]              217   7e-55
ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplast...   217   7e-55
ref|XP_003624992.1| DNA gyrase subunit B [Medicago truncatula] g...   209   2e-52
ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arab...   208   3e-52
ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplast...   207   6e-52

>emb|CBI30132.3| unnamed protein product [Vitis vinifera]
          Length = 707

 Score =  217 bits (553), Expect = 7e-55
 Identities = 111/140 (79%), Positives = 117/140 (83%)
 Frame = -2

Query: 421 SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNGVDEAQAGFASRIDVV 242
           SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDN +DEAQAGFAS++DVV
Sbjct: 63  SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVV 122

Query: 241 LLADNSVSITDNGRGIPTDFHPATKKSALETVLTVLHAGGKFXXXXXXXXXXXXXXXXXX 62
           LLAD+SVSITDNGRGIPT+ HP TKKS+LETVLTVLHAGGKF                  
Sbjct: 123 LLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGL 182

Query: 61  XXVNALSEALEVTVWRDGME 2
             VNALSEALEVTVWRDGME
Sbjct: 183 SVVNALSEALEVTVWRDGME 202


>ref|XP_002266668.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Vitis vinifera]
          Length = 719

 Score =  217 bits (553), Expect = 7e-55
 Identities = 111/140 (79%), Positives = 117/140 (83%)
 Frame = -2

Query: 421 SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNGVDEAQAGFASRIDVV 242
           SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDN +DEAQAGFAS++DVV
Sbjct: 75  SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNAIDEAQAGFASKVDVV 134

Query: 241 LLADNSVSITDNGRGIPTDFHPATKKSALETVLTVLHAGGKFXXXXXXXXXXXXXXXXXX 62
           LLAD+SVSITDNGRGIPT+ HP TKKS+LETVLTVLHAGGKF                  
Sbjct: 135 LLADDSVSITDNGRGIPTELHPVTKKSSLETVLTVLHAGGKFGGASSGYSVSGGLHGVGL 194

Query: 61  XXVNALSEALEVTVWRDGME 2
             VNALSEALEVTVWRDGME
Sbjct: 195 SVVNALSEALEVTVWRDGME 214


>ref|XP_003624992.1| DNA gyrase subunit B [Medicago truncatula]
           gi|355500007|gb|AES81210.1| DNA gyrase subunit B
           [Medicago truncatula]
          Length = 839

 Score =  209 bits (532), Expect = 2e-52
 Identities = 108/140 (77%), Positives = 114/140 (81%)
 Frame = -2

Query: 421 SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNGVDEAQAGFASRIDVV 242
           SKAYGS+QIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDN VDEAQAGFAS+IDVV
Sbjct: 82  SKAYGSDQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASKIDVV 141

Query: 241 LLADNSVSITDNGRGIPTDFHPATKKSALETVLTVLHAGGKFXXXXXXXXXXXXXXXXXX 62
           L AD+SVSI DNGRGIPTD HP TKKSALETVLT+LHAGGKF                  
Sbjct: 142 LHADDSVSIADNGRGIPTDMHPTTKKSALETVLTILHAGGKFGGINSGYSVSGGLHGVGL 201

Query: 61  XXVNALSEALEVTVWRDGME 2
             VNALSEALEVTVWR+G+E
Sbjct: 202 SVVNALSEALEVTVWREGLE 221


>ref|XP_002873136.1| hypothetical protein ARALYDRAFT_487191 [Arabidopsis lyrata subsp.
           lyrata] gi|297318973|gb|EFH49395.1| hypothetical protein
           ARALYDRAFT_487191 [Arabidopsis lyrata subsp. lyrata]
          Length = 729

 Score =  208 bits (530), Expect = 3e-52
 Identities = 107/140 (76%), Positives = 112/140 (80%)
 Frame = -2

Query: 421 SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNGVDEAQAGFASRIDVV 242
           SK Y SEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDN +DEAQAGFAS++DVV
Sbjct: 85  SKGYSSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAIDEAQAGFASKVDVV 144

Query: 241 LLADNSVSITDNGRGIPTDFHPATKKSALETVLTVLHAGGKFXXXXXXXXXXXXXXXXXX 62
           L AD SVS+ DNGRGIPTD HPATKKS+LETVLTVLHAGGKF                  
Sbjct: 145 LHADGSVSVVDNGRGIPTDLHPATKKSSLETVLTVLHAGGKFGGTSSGYSVSGGLHGVGL 204

Query: 61  XXVNALSEALEVTVWRDGME 2
             VNALSEALEVTVWRDGME
Sbjct: 205 SVVNALSEALEVTVWRDGME 224


>ref|XP_004157973.1| PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial-like
           [Cucumis sativus]
          Length = 719

 Score =  207 bits (528), Expect = 6e-52
 Identities = 107/140 (76%), Positives = 113/140 (80%)
 Frame = -2

Query: 421 SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGLRGLHHLVYEILDNGVDEAQAGFASRIDVV 242
           SKAYGSEQIQVLEGLDPVRKRPGMYIGSTG RGLHHLVYEILDN VDEAQAGFAS+IDVV
Sbjct: 75  SKAYGSEQIQVLEGLDPVRKRPGMYIGSTGPRGLHHLVYEILDNAVDEAQAGFASQIDVV 134

Query: 241 LLADNSVSITDNGRGIPTDFHPATKKSALETVLTVLHAGGKFXXXXXXXXXXXXXXXXXX 62
           L ADNSVS+ DNGRGIPTD HP TKKS+LETVLTVLHAGGKF                  
Sbjct: 135 LHADNSVSVADNGRGIPTDLHPVTKKSSLETVLTVLHAGGKFGGSSSGYSVSGGLHGVGL 194

Query: 61  XXVNALSEALEVTVWRDGME 2
             VNALSE+LEV++WRDG E
Sbjct: 195 SVVNALSESLEVSIWRDGNE 214


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