BLASTX nr result

ID: Papaver23_contig00025800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025800
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15398.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   136   2e-30
ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   127   1e-27
ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putativ...   126   2e-27
ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   124   8e-27

>emb|CBI15398.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/137 (53%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
 Frame = -1

Query: 439 AKVQPHLEDLVEKNYYLNKSAKEAYRAYILAYNSHSMKDIFNVHQLNLQXXXXXXXXXXX 260
           A VQ HLE LV  NYYLNKSAK+AYR+YILAYNSHSMKDIFNVH+L+LQ           
Sbjct: 384 ANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQ----------- 432

Query: 259 XXXXXXXXXXXXXXXXXXXXXXXXXXXPPKINLALDSNASKFRKKSRKVDGSRHGINRDN 80
                                      PPK+NL++DS+ASKFRKK+ KV+GSR+G +  N
Sbjct: 433 -----------------AVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRNGFSESN 475

Query: 79  PYGKQK--DDNRQFVRY 35
           PYG+Q+  DD RQFVRY
Sbjct: 476 PYGRQRGQDDKRQFVRY 492


>ref|XP_002275026.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 1
           [Vitis vinifera]
          Length = 580

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/137 (53%), Positives = 87/137 (63%), Gaps = 2/137 (1%)
 Frame = -1

Query: 439 AKVQPHLEDLVEKNYYLNKSAKEAYRAYILAYNSHSMKDIFNVHQLNLQXXXXXXXXXXX 260
           A VQ HLE LV  NYYLNKSAK+AYR+YILAYNSHSMKDIFNVH+L+LQ           
Sbjct: 472 ANVQSHLEKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQ----------- 520

Query: 259 XXXXXXXXXXXXXXXXXXXXXXXXXXXPPKINLALDSNASKFRKKSRKVDGSRHGINRDN 80
                                      PPK+NL++DS+ASKFRKK+ KV+GSR+G +  N
Sbjct: 521 -----------------AVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRNGFSESN 563

Query: 79  PYGKQK--DDNRQFVRY 35
           PYG+Q+  DD RQFVRY
Sbjct: 564 PYGRQRGQDDKRQFVRY 580


>ref|XP_003634187.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like isoform 2
           [Vitis vinifera]
          Length = 503

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/130 (52%), Positives = 82/130 (63%), Gaps = 2/130 (1%)
 Frame = -1

Query: 418 EDLVEKNYYLNKSAKEAYRAYILAYNSHSMKDIFNVHQLNLQXXXXXXXXXXXXXXXXXX 239
           E LV  NYYLNKSAK+AYR+YILAYNSHSMKDIFNVH+L+LQ                  
Sbjct: 402 EKLVSNNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQ------------------ 443

Query: 238 XXXXXXXXXXXXXXXXXXXXPPKINLALDSNASKFRKKSRKVDGSRHGINRDNPYGKQK- 62
                               PPK+NL++DS+ASKFRKK+ KV+GSR+G +  NPYG+Q+ 
Sbjct: 444 ----------AVASSFCFSSPPKVNLSIDSSASKFRKKTHKVEGSRNGFSESNPYGRQRG 493

Query: 61  -DDNRQFVRY 35
            DD RQFVRY
Sbjct: 494 QDDKRQFVRY 503


>ref|XP_002529205.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223531323|gb|EEF33161.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 590

 Score =  126 bits (316), Expect = 2e-27
 Identities = 71/137 (51%), Positives = 85/137 (62%), Gaps = 2/137 (1%)
 Frame = -1

Query: 439 AKVQPHLEDLVEKNYYLNKSAKEAYRAYILAYNSHSMKDIFNVHQLNLQXXXXXXXXXXX 260
           A VQ HLE LV  NYYLNKSAK+AYR+YILAYNSHSMKDIFNVH+L+LQ           
Sbjct: 484 ANVQSHLEKLVANNYYLNKSAKDAYRSYILAYNSHSMKDIFNVHRLDLQ----------- 532

Query: 259 XXXXXXXXXXXXXXXXXXXXXXXXXXXPPKINLALDSNASKFRKKSRKVDGSRHGINRDN 80
                                      PPK+NL +DSNASKFRKK+ K  GSR+G +  N
Sbjct: 533 -----------------AVAASFCFSCPPKVNLNIDSNASKFRKKAHK--GSRNGFSESN 573

Query: 79  PYGKQKDDN--RQFVRY 35
           PYG+Q+D++  RQFVR+
Sbjct: 574 PYGRQRDEDNTRQFVRH 590


>ref|XP_004169180.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 51-like [Cucumis
           sativus]
          Length = 579

 Score =  124 bits (311), Expect = 8e-27
 Identities = 68/136 (50%), Positives = 83/136 (61%), Gaps = 1/136 (0%)
 Frame = -1

Query: 439 AKVQPHLEDLVEKNYYLNKSAKEAYRAYILAYNSHSMKDIFNVHQLNLQXXXXXXXXXXX 260
           A VQ HLE LV  NY+LNK+AK+AYR Y+LAYNSHSMKDIFNVH+L+LQ           
Sbjct: 472 ANVQSHLEKLVGSNYHLNKAAKDAYRTYLLAYNSHSMKDIFNVHRLDLQ----------- 520

Query: 259 XXXXXXXXXXXXXXXXXXXXXXXXXXXPPKINLALDSNASKFRKKSRKVDGSRHGINRDN 80
                                      PPK+NL +DS+ASK RKK+RKV+GSR+  +  N
Sbjct: 521 -----------------AIAASFCFSNPPKVNLNIDSSASKLRKKTRKVEGSRNRFSESN 563

Query: 79  PYGKQK-DDNRQFVRY 35
           PYGK+  +D RQFVRY
Sbjct: 564 PYGKKNAEDERQFVRY 579


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