BLASTX nr result

ID: Papaver23_contig00025738 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025738
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic su...   256   4e-66
emb|CBI21412.3| unnamed protein product [Vitis vinifera]              256   4e-66
ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, puta...   243   3e-62
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   235   8e-60
ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic su...   231   1e-58

>ref|XP_002277947.2| PREDICTED: DNA polymerase alpha catalytic subunit-like [Vitis
            vinifera]
          Length = 1522

 Score =  256 bits (654), Expect = 4e-66
 Identities = 122/190 (64%), Positives = 149/190 (78%)
 Frame = -2

Query: 815  TFECPXXXXXXXXXXXSDNPVGSDEEKLSSHFWRRLRCLKCPDESEDRGRMTRAMIANQV 636
            TF+CP             +     EE  S++FW+RLRC KCP+E  D GRM+ A+IANQV
Sbjct: 1336 TFDCPTLFNSVHTSITEKSTQVQVEE--SNNFWQRLRCPKCPEEG-DVGRMSPALIANQV 1392

Query: 635  KTQADGFISMYYKGVMTCEDETCKYTTRGLNLRVVGDSERGIVCPNYPHCNGHLVRKYTE 456
            K QADGFISMYYKG M C+DETCK+TT  LNLRV+GDSERG VCPNYP CNG LVRKYTE
Sbjct: 1393 KRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTE 1452

Query: 455  ADLYRQLTYFCHILDAVRFVEKLELKIRIPLERELARIQPMVDLAASIVQKLRDQCAYGW 276
            ADLY+QL+YFCH+LD VR +EK+E+  RIP+E+ELARI+P+V+LAAS  QK+RD+CAYGW
Sbjct: 1453 ADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGW 1512

Query: 275  VQMKDLFVSL 246
            VQ+ DL V++
Sbjct: 1513 VQLDDLTVTV 1522


>emb|CBI21412.3| unnamed protein product [Vitis vinifera]
          Length = 1561

 Score =  256 bits (654), Expect = 4e-66
 Identities = 122/190 (64%), Positives = 149/190 (78%)
 Frame = -2

Query: 815  TFECPXXXXXXXXXXXSDNPVGSDEEKLSSHFWRRLRCLKCPDESEDRGRMTRAMIANQV 636
            TF+CP             +     EE  S++FW+RLRC KCP+E  D GRM+ A+IANQV
Sbjct: 1375 TFDCPTLFNSVHTSITEKSTQVQVEE--SNNFWQRLRCPKCPEEG-DVGRMSPALIANQV 1431

Query: 635  KTQADGFISMYYKGVMTCEDETCKYTTRGLNLRVVGDSERGIVCPNYPHCNGHLVRKYTE 456
            K QADGFISMYYKG M C+DETCK+TT  LNLRV+GDSERG VCPNYP CNG LVRKYTE
Sbjct: 1432 KRQADGFISMYYKGSMMCDDETCKHTTNSLNLRVIGDSERGTVCPNYPRCNGRLVRKYTE 1491

Query: 455  ADLYRQLTYFCHILDAVRFVEKLELKIRIPLERELARIQPMVDLAASIVQKLRDQCAYGW 276
            ADLY+QL+YFCH+LD VR +EK+E+  RIP+E+ELARI+P+V+LAAS  QK+RD+CAYGW
Sbjct: 1492 ADLYKQLSYFCHVLDTVRCIEKMEVSTRIPIEKELARIRPLVNLAASTTQKIRDRCAYGW 1551

Query: 275  VQMKDLFVSL 246
            VQ+ DL V++
Sbjct: 1552 VQLDDLTVTV 1561


>ref|XP_002523609.1| DNA polymerase alpha catalytic subunit, putative [Ricinus communis]
            gi|223537171|gb|EEF38804.1| DNA polymerase alpha
            catalytic subunit, putative [Ricinus communis]
          Length = 1526

 Score =  243 bits (621), Expect = 3e-62
 Identities = 113/190 (59%), Positives = 148/190 (77%)
 Frame = -2

Query: 815  TFECPXXXXXXXXXXXSDNPVGSDEEKLSSHFWRRLRCLKCPDESEDRGRMTRAMIANQV 636
            TFECP           + NP     E+  S+FW R+RC KCP+E  D GR++ AM+ANQV
Sbjct: 1339 TFECPAVFGSICTSISA-NPTKLQVEESVSNFWCRMRCPKCPEEG-DTGRISPAMLANQV 1396

Query: 635  KTQADGFISMYYKGVMTCEDETCKYTTRGLNLRVVGDSERGIVCPNYPHCNGHLVRKYTE 456
            K QA+GF+SMYYKG+MTC+DETCK+ TR LNLR++GDSERG VCPNYP CNG LVRKYTE
Sbjct: 1397 KRQAEGFVSMYYKGLMTCDDETCKHITRSLNLRLIGDSERGTVCPNYPRCNGRLVRKYTE 1456

Query: 455  ADLYRQLTYFCHILDAVRFVEKLELKIRIPLERELARIQPMVDLAASIVQKLRDQCAYGW 276
            A+LY+QL+++C++LD VR +EK++   RI LE+++ +I+PMVDLA S VQK+RD+CAYGW
Sbjct: 1457 AELYKQLSFYCYLLDTVRCMEKMDAGTRISLEKKITKIRPMVDLAVSTVQKIRDRCAYGW 1516

Query: 275  VQMKDLFVSL 246
            VQ+ DL V++
Sbjct: 1517 VQLSDLSVTV 1526


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  235 bits (600), Expect = 8e-60
 Identities = 108/171 (63%), Positives = 133/171 (77%)
 Frame = -2

Query: 761  NPVGSDEEKLSSHFWRRLRCLKCPDESEDRGRMTRAMIANQVKTQADGFISMYYKGVMTC 582
            NP      + +S  W R  C KCP+ESE  G ++ A+IANQVK Q +GFIS YYKGVM C
Sbjct: 1392 NPADLQVGESASKVWERFSCPKCPEESE--GNISSALIANQVKRQVEGFISTYYKGVMMC 1449

Query: 581  EDETCKYTTRGLNLRVVGDSERGIVCPNYPHCNGHLVRKYTEADLYRQLTYFCHILDAVR 402
            +DETC YTTR LNLRV+GDSERG VCPNYP CNGHL+R+YTEADLY+QL YFC +LD VR
Sbjct: 1450 DDETCNYTTRSLNLRVIGDSERGTVCPNYPRCNGHLLRQYTEADLYKQLAYFCFVLDTVR 1509

Query: 401  FVEKLELKIRIPLERELARIQPMVDLAASIVQKLRDQCAYGWVQMKDLFVS 249
             +EK+E  +R+ +E+EL RI+P+V+ AAS V+K RD+CAY WVQ+KDL VS
Sbjct: 1510 CIEKVESNMRLQVEKELVRIRPVVEAAASTVEKFRDRCAYSWVQLKDLIVS 1560


>ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
            [Cucumis sativus]
          Length = 1027

 Score =  231 bits (589), Expect = 1e-58
 Identities = 110/189 (58%), Positives = 139/189 (73%)
 Frame = -2

Query: 815  TFECPXXXXXXXXXXXSDNPVGSDEEKLSSHFWRRLRCLKCPDESEDRGRMTRAMIANQV 636
            TF CP                  DE   ++ FW  LRC KCPDE+ + GR+T  MIANQV
Sbjct: 841  TFNCPPIFSSIYKSAEGKQERLVDEP--TTKFWNNLRCPKCPDEA-NAGRITPGMIANQV 897

Query: 635  KTQADGFISMYYKGVMTCEDETCKYTTRGLNLRVVGDSERGIVCPNYPHCNGHLVRKYTE 456
            K QAD FISMYY G+M C+DETCKY TR +NLRV+GDSE+G +CPNYPHCNGHLVRKYTE
Sbjct: 898  KRQADRFISMYYNGLMMCDDETCKYATRAVNLRVMGDSEKGTICPNYPHCNGHLVRKYTE 957

Query: 455  ADLYRQLTYFCHILDAVRFVEKLELKIRIPLERELARIQPMVDLAASIVQKLRDQCAYGW 276
            ADLY+QL+YF HILD  R +EKLE+  R+ LE+E+A I+P+V+LAA+ +Q +RD+ AYGW
Sbjct: 958  ADLYKQLSYFSHILDTERCMEKLEVHARVTLEKEMASIRPVVELAATTIQSIRDRSAYGW 1017

Query: 275  VQMKDLFVS 249
            VQ+++  V+
Sbjct: 1018 VQLQNFVVT 1026


Top