BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025463
         (575 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]         144   8e-33
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   144   1e-32
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar...   142   3e-32
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   136   3e-30
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           132   3e-29

>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
          Length = 1466

 Score =  144 bits (364), Expect = 8e-33
 Identities = 75/184 (40%), Positives = 111/184 (60%), Gaps = 3/184 (1%)
 Frame = +2

Query: 32  IKSLPSRKVLARGPNASELYPIKSS---ALRRNTALSASIMSNSNTXXXXXXXXXXXXWN 202
           I  L ++KV+++GP  + LY +++S   AL  N   +AS+ +                W+
Sbjct: 416 IIDLTTQKVVSKGPRNNGLYMLENSEFVALYSNRQCAASMET----------------WH 459

Query: 203 QRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHC 382
            RLGH  S ++  L T   IQ++      VC  CQ+GKS  L F  S  RA +PL  VHC
Sbjct: 460 HRLGHSNSKILQQLLTRKEIQVNKSRTSPVCEPCQMGKSTRLQFFSSDFRALKPLDRVHC 519

Query: 383 DIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFILFKSLMENLLDLKIKE 562
           D+WGP+P +S+ GFKY+ VFVDDFS+++W FP++ +S+ ++ FI ++ L+EN L  KIKE
Sbjct: 520 DLWGPSPVVSNQGFKYYAVFVDDFSRFSWFFPLRMKSKFISVFIAYQKLVENQLGTKIKE 579

Query: 563 FQCD 574
           FQ D
Sbjct: 580 FQSD 583


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score =  144 bits (362), Expect = 1e-32
 Identities = 73/184 (39%), Positives = 107/184 (58%), Gaps = 3/184 (1%)
 Frame = +2

Query: 32  IKSLPSRKVLARGPNASELYPIKSS---ALRRNTALSASIMSNSNTXXXXXXXXXXXXWN 202
           I  L ++KV+  GP  + LY +++    AL  N   +A+                   W+
Sbjct: 414 IIDLQTQKVVTTGPRRNGLYVLENQEFVALYSNRQCAAT----------------EEVWH 457

Query: 203 QRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHC 382
            RLGH  S  + +L  + AIQ++      VC  CQ+GKS  LPFL+S SR   PL  +HC
Sbjct: 458 HRLGHANSKALQHLQNSKAIQINKSRTSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHC 517

Query: 383 DIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFILFKSLMENLLDLKIKE 562
           D+WGP+P +S+ G KY+ +FVDD+S+Y+W +P+  +SE L+ FI F+ L+EN L+ KIK 
Sbjct: 518 DLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVENQLNTKIKV 577

Query: 563 FQCD 574
           FQ D
Sbjct: 578 FQSD 581


>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
          Length = 1522

 Score =  142 bits (359), Expect = 3e-32
 Identities = 71/191 (37%), Positives = 114/191 (59%)
 Frame = +2

Query: 2   SYEFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXXXXXX 181
           S EF      I    ++K+L  G N   LY ++   L+    +  S   NS +       
Sbjct: 408 SVEFDADSVRINDKATKKLLVMGRNRDGLYSLEEPKLQ----VLYSTRQNSASSEV---- 459

Query: 182 XXXXXWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQ 361
                W++RLGH  + V++ L ++ +I + NKV ++VC +C LGKS  LPF++S   A +
Sbjct: 460 -----WHRRLGHANAEVLHQLASSKSIIIINKVVKTVCEACHLGKSTRLPFMLSTFNASR 514

Query: 362 PLSLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFILFKSLMENL 541
           PL  +HCD+WGP+P+ S  GF+Y++VF+D +S++ W +P+K +S+  + F++F+ L+EN 
Sbjct: 515 PLERIHCDLWGPSPTSSVQGFRYYVVFIDHYSRFTWFYPLKLKSDFFSTFVMFQKLVENQ 574

Query: 542 LDLKIKEFQCD 574
           L  KIK FQCD
Sbjct: 575 LGHKIKIFQCD 585


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  136 bits (342), Expect = 3e-30
 Identities = 73/189 (38%), Positives = 107/189 (56%)
 Frame = +2

Query: 8   EFFPWGYEIKSLPSRKVLARGPNASELYPIKSSALRRNTALSASIMSNSNTXXXXXXXXX 187
           EF   G  I    ++K+L  G     LY +K  + +     S    S S+          
Sbjct: 416 EFDSDGVRINDKATKKLLIMGSTCDGLYCLKDDS-QFKAFFSTRQQSASDEV-------- 466

Query: 188 XXXWNQRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPL 367
              W++RLGHP   V+  L  T +I + NK  +S+C +CQLGKS  LPF+ S   + +PL
Sbjct: 467 ---WHRRLGHPHPQVLQQLVKTNSISI-NKTSKSLCEACQLGKSTRLPFVSSSFTSNRPL 522

Query: 368 SLVHCDIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFILFKSLMENLLD 547
             VHCD+WGP+P  S  GF+Y+ VF+D +S+++WI+P+K +S+  N F+ F  L+EN L+
Sbjct: 523 ERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLVENQLN 582

Query: 548 LKIKEFQCD 574
            KI  FQCD
Sbjct: 583 HKISVFQCD 591


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  132 bits (333), Expect = 3e-29
 Identities = 66/184 (35%), Positives = 103/184 (55%), Gaps = 3/184 (1%)
 Frame = +2

Query: 32  IKSLPSRKVLARGPNASELYPIKSS---ALRRNTALSASIMSNSNTXXXXXXXXXXXXWN 202
           I  + ++KV+++GP ++ LY +++    A   N   +AS                   W+
Sbjct: 417 IIDINTQKVVSKGPRSNGLYVLENQEFVAFYSNRQCAAS----------------EEIWH 460

Query: 203 QRLGHPISTVINNLHTTGAIQLSNKVFESVCTSCQLGKSHSLPFLVSPSRACQPLSLVHC 382
            RLGH  S ++  L ++  I  +      VC  CQ+GKS  L F  S SR    L  +HC
Sbjct: 461 HRLGHSNSRILQQLKSSKEISFNKSRMSPVCEPCQMGKSSKLQFFSSNSRELDLLGRIHC 520

Query: 383 DIWGPAPSISHLGFKYFIVFVDDFSKYNWIFPMKCRSESLNCFILFKSLMENLLDLKIKE 562
           D+WGP+P +S  GFKY++VFVDD+S+Y+W +P+K +S+    F+ F++L+EN  + KIK 
Sbjct: 521 DLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVENQFNTKIKV 580

Query: 563 FQCD 574
           FQ D
Sbjct: 581 FQSD 584