BLASTX nr result

ID: Papaver23_contig00025379 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025379
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricin...   260   1e-67
ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E sub...   257   8e-67
ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocar...   252   3e-65
ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   248   6e-64
ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...   244   9e-63

>ref|XP_002513060.1| DNA-directed RNA polymerase, putative [Ricinus communis]
           gi|223548071|gb|EEF49563.1| DNA-directed RNA polymerase,
           putative [Ricinus communis]
          Length = 991

 Score =  260 bits (664), Expect = 1e-67
 Identities = 125/189 (66%), Positives = 156/189 (82%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRISA 177
           ++E    DG++ L+LK+P + +LR+  WNFLERYGF YG +  RTLLPCEVLE+L+RI  
Sbjct: 132 IKEVKTTDGAYILQLKLPSRMRLRDGFWNFLERYGFRYGDDITRTLLPCEVLEMLRRIPQ 191

Query: 178 ETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEII 357
           +T+KKLA KGYFPQDGYI++ +PVPPNCLSVPDISDG ++MSSD+S+SMLKKVLKQ EII
Sbjct: 192 DTRKKLAKKGYFPQDGYIMRYVPVPPNCLSVPDISDGVSVMSSDLSISMLKKVLKQVEII 251

Query: 358 KSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNVSDDTSAKAWIE 537
           KSSRSG PNFESHEVEA +LQSA+ QYL VRG+ K  R +  +FGV+  S+D+S KAW+E
Sbjct: 252 KSSRSGEPNFESHEVEAVDLQSAVDQYLQVRGTAKSARDVGERFGVHKESNDSSTKAWLE 311

Query: 538 KMKTLFISK 564
           KM+TLFI K
Sbjct: 312 KMRTLFIRK 320


>ref|XP_004155767.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Cucumis
           sativus]
          Length = 1959

 Score =  257 bits (657), Expect = 8e-67
 Identities = 127/189 (67%), Positives = 152/189 (80%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRISA 177
           +RE+   DG+  L+LKVP ++ L+E  W+FLERYGF YG    RTLLPCEV E+LK+I  
Sbjct: 130 IREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLPCEVKEMLKKIPN 189

Query: 178 ETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEII 357
           ET+KKLA +GY+PQDGYILQ LPVPPNCLSVP+ISDG T+MSSD +VSMLKK+LKQ EII
Sbjct: 190 ETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEII 249

Query: 358 KSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNVSDDTSAKAWIE 537
           K SRSG PNFESHEVEAN+LQ A+ QYL VRG+ K  RGI ++FGVN   +D S KAW+E
Sbjct: 250 KGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLE 309

Query: 538 KMKTLFISK 564
           KM+TLFI K
Sbjct: 310 KMRTLFIRK 318


>ref|XP_002303925.1| RNA polymerase IV subunit [Populus trichocarpa]
           gi|222841357|gb|EEE78904.1| RNA polymerase IV subunit
           [Populus trichocarpa]
          Length = 924

 Score =  252 bits (644), Expect = 3e-65
 Identities = 122/189 (64%), Positives = 154/189 (81%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRISA 177
           +RE    DG+  LELK+P +S+LR+  WNFLERYGF YG +  R LLPCEV++ILKRI A
Sbjct: 132 IREVKNTDGACFLELKLPSRSRLRDGCWNFLERYGFRYGDDFTRPLLPCEVMQILKRIPA 191

Query: 178 ETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEII 357
           ET+KKL+ KGYFPQDGYILQ+LPVPPNCLSVP +SDG T+MSSD+S+SMLKKVLKQAE+I
Sbjct: 192 ETRKKLSGKGYFPQDGYILQQLPVPPNCLSVPVVSDGITVMSSDLSISMLKKVLKQAEVI 251

Query: 358 KSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNVSDDTSAKAWIE 537
           +SSRSG PNF++H+ EA  LQS + QYL VRG+TK  R + +++GV   S +++ KAW+E
Sbjct: 252 RSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDVDTRYGVKKESSESTTKAWLE 311

Query: 538 KMKTLFISK 564
           KM+TLFI K
Sbjct: 312 KMRTLFIRK 320


>ref|XP_004140346.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase E
           subunit 1-like [Cucumis sativus]
          Length = 2019

 Score =  248 bits (632), Expect = 6e-64
 Identities = 124/189 (65%), Positives = 149/189 (78%), Gaps = 1/189 (0%)
 Frame = +1

Query: 1   VRESNLKDGSFCLELKVP-KSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRISA 177
           +RE+   DG+  L+LKVP ++ L+E  W+FLERYGF YG    RTLL   V E+LK+I  
Sbjct: 160 IREAKKADGASYLQLKVPSRTSLQERFWDFLERYGFRYGDNFTRTLLSVMVKEMLKKIPN 219

Query: 178 ETKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEII 357
           ET+KKLA +GY+PQDGYILQ LPVPPNCLSVP+ISDG T+MSSD +VSMLKK+LKQ EII
Sbjct: 220 ETRKKLAGRGYYPQDGYILQYLPVPPNCLSVPEISDGVTVMSSDPAVSMLKKILKQVEII 279

Query: 358 KSSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNVSDDTSAKAWIE 537
           K SRSG PNFESHEVEAN+LQ A+ QYL VRG+ K  RGI ++FGVN   +D S KAW+E
Sbjct: 280 KGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGIDARFGVNKELNDPSTKAWLE 339

Query: 538 KMKTLFISK 564
           KM+TLFI K
Sbjct: 340 KMRTLFIRK 348


>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine
           max]
          Length = 2098

 Score =  244 bits (622), Expect = 9e-63
 Identities = 114/188 (60%), Positives = 147/188 (78%)
 Frame = +1

Query: 1   VRESNLKDGSFCLELKVPKSKLRESMWNFLERYGFIYGYEECRTLLPCEVLEILKRISAE 180
           +RE    DG+  L LKV KSK++   W+FLE+YG+ YG +  R LLPCE +EI+KRI  E
Sbjct: 135 IREVKTSDGACYLALKVSKSKMQNGFWSFLEKYGYRYGGDHTRALLPCEAMEIIKRIPIE 194

Query: 181 TKKKLAAKGYFPQDGYILQKLPVPPNCLSVPDISDGTTIMSSDVSVSMLKKVLKQAEIIK 360
           TKKKLA KGYFPQDGY+L+ LPVPPNCLSVP++SDG ++MSSD S+++L+K+L++ EIIK
Sbjct: 195 TKKKLAGKGYFPQDGYVLKYLPVPPNCLSVPEVSDGVSVMSSDPSITILRKLLRKVEIIK 254

Query: 361 SSRSGPPNFESHEVEANELQSAIAQYLHVRGSTKGPRGIKSKFGVNNVSDDTSAKAWIEK 540
           SSRSG PNFESH VEAN+LQS + QY  +RG++K  R I++ FGVN     +S KAW+EK
Sbjct: 255 SSRSGEPNFESHHVEANDLQSVVDQYFQIRGTSKPARDIETHFGVNKELTASSTKAWLEK 314

Query: 541 MKTLFISK 564
           M+TLFI K
Sbjct: 315 MRTLFIRK 322


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