BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025290
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [...   340   2e-91
emb|CBI31488.3| unnamed protein product [Vitis vinifera]              338   5e-91
ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|2...   327   2e-87
ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thalian...   320   2e-85
ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatul...   320   2e-85

>ref|XP_002276664.1| PREDICTED: RNA pseudourine synthase 5-like [Vitis vinifera]
          Length = 348

 Score =  340 bits (871), Expect = 2e-91
 Identities = 167/244 (68%), Positives = 195/244 (79%), Gaps = 7/244 (2%)
 Frame = +2

Query: 20  ETFGVKWPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQ 199
           +TFGV WPDFN GLTY D V  + S  TLI +YS+KH +SAP QGWLQRI  GQIT+DG 
Sbjct: 3   KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 200 IEKNPDTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQR 379
           +   P TILR G +LVYHR+PW+EPDAPYLL++LYED+ ++ALNKPSG+QVLPGGLFQQR
Sbjct: 63  VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 380 TVLTQLQWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAV 547
           TVLTQLQWR  K       QE H VPVHRLGRGTSGILLCAK+KLAKTRL+AYFADGT+V
Sbjct: 123 TVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSV 182

Query: 548 VHEKNTNTE---RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSG 718
           V     + +   R+ RKISK+YRAL  GI+DKDE+VI QPIG ++Y GVAKGLY+AS SG
Sbjct: 183 VGGNRLDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSG 242

Query: 719 KPAL 730
           KPAL
Sbjct: 243 KPAL 246


>emb|CBI31488.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  338 bits (868), Expect = 5e-91
 Identities = 167/243 (68%), Positives = 194/243 (79%), Gaps = 6/243 (2%)
 Frame = +2

Query: 20  ETFGVKWPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQ 199
           +TFGV WPDFN GLTY D V  + S  TLI +YS+KH +SAP QGWLQRI  GQIT+DG 
Sbjct: 3   KTFGVPWPDFNDGLTYNDVVSASDSELTLIDYYSSKHKNSAPLQGWLQRINKGQITVDGT 62

Query: 200 IEKNPDTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQR 379
           +   P TILR G +LVYHR+PW+EPDAPYLL++LYED+ ++ALNKPSG+QVLPGGLFQQR
Sbjct: 63  VVTEPKTILRAGSKLVYHRLPWQEPDAPYLLEILYEDDDVIALNKPSGLQVLPGGLFQQR 122

Query: 380 TVLTQLQWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAV 547
           TVLTQLQWR  K       QE H VPVHRLGRGTSGILLCAK+KLAKTRL+AYFADGT+V
Sbjct: 123 TVLTQLQWRANKQNSLPACQESHSVPVHRLGRGTSGILLCAKTKLAKTRLAAYFADGTSV 182

Query: 548 V--HEKNTNTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGK 721
           V  +       R+ RKISK+YRAL  GI+DKDE+VI QPIG ++Y GVAKGLY+AS SGK
Sbjct: 183 VGGNRDADMKSRTMRKISKIYRALVNGILDKDEIVIEQPIGMVQYPGVAKGLYVASPSGK 242

Query: 722 PAL 730
           PAL
Sbjct: 243 PAL 245


>ref|XP_002312025.1| predicted protein [Populus trichocarpa] gi|222851845|gb|EEE89392.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  327 bits (837), Expect = 2e-87
 Identities = 163/243 (67%), Positives = 194/243 (79%), Gaps = 7/243 (2%)
 Frame = +2

Query: 23  TFGVKWPDFNGGLTYADTVKPNT-SCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQ 199
           +FG  WPD N GL Y D V  ++ S  TLI FYS+K+ +SAP QGWLQRI NGQITIDG+
Sbjct: 13  SFGSPWPDLNEGLFYNDVVSTSSDSGLTLIHFYSSKYKNSAPLQGWLQRIHNGQITIDGE 72

Query: 200 IEKNPDTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQR 379
           + K P  ILR+G+ELVYHR+PW+EPDAPYLL VLYED+ +VALNKP G+QVLPGGLFQQR
Sbjct: 73  VVKEPKAILRDGMELVYHRLPWREPDAPYLLQVLYEDDDMVALNKPPGLQVLPGGLFQQR 132

Query: 380 TVLTQLQWRGGKSGD----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAV 547
           TVL QLQWR  K       Q  HPVPVHRLGRGTSGILLCAK+K+AKT L+AYFADGT++
Sbjct: 133 TVLMQLQWRASKGSSSLAIQGSHPVPVHRLGRGTSGILLCAKTKVAKTSLAAYFADGTSL 192

Query: 548 VHE-KNTNTERS-GRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGK 721
           + +  N N E+S  RKISK+YRAL  GI+++D+++I QPIG MRY GVAKGLY+AS SGK
Sbjct: 193 IGDSSNANMEQSKRRKISKIYRALVNGILNQDKIIIKQPIGTMRYPGVAKGLYVASPSGK 252

Query: 722 PAL 730
           PAL
Sbjct: 253 PAL 255


>ref|NP_974416.1| RNA pseudourine synthase 5 [Arabidopsis thaliana]
           gi|229891781|sp|Q5M721.2|PUS5_ARATH RecName: Full=RNA
           pseudourine synthase 5; AltName: Full=RNA
           pseudouridylate synthase 5; AltName: Full=RNA-uridine
           isomerase 5 gi|332645400|gb|AEE78921.1| RNA pseudourine
           synthase 5 [Arabidopsis thaliana]
          Length = 369

 Score =  320 bits (820), Expect = 2e-85
 Identities = 158/247 (63%), Positives = 195/247 (78%), Gaps = 7/247 (2%)
 Frame = +2

Query: 8   SPILETFGVKWPDFNGGLTYADTVKPNTSCCTLIS-FYSTKHSSSAPFQGWLQRIQNGQI 184
           SP  +  G+ WP+ N GL Y D +  + S  T +S FY TK+ SSAP  GW+QRIQNGQI
Sbjct: 2   SPPPQRIGLPWPELNDGLAYKDAISSSESELTTVSEFYFTKYKSSAPLLGWIQRIQNGQI 61

Query: 185 TIDGQIEKNPDTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGG 364
            IDG++ K+P+T+LR G +LVY R+PWKEPD PY L+VLYED+ L+ALNKPSG+QVLPGG
Sbjct: 62  QIDGEVVKDPNTLLRSGSKLVYSRLPWKEPDTPYSLEVLYEDDDLIALNKPSGLQVLPGG 121

Query: 365 LFQQRTVLTQLQWRGGKSGD-----QEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYF 529
           LFQQRTVLTQLQW  GK+       + PHPVPVHRLGRGTSGILLCAK+KLAKT+L+AYF
Sbjct: 122 LFQQRTVLTQLQWCFGKNDSYIGSRESPHPVPVHRLGRGTSGILLCAKTKLAKTKLAAYF 181

Query: 530 ADGTAVVHEKNTNTE-RSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMA 706
           A+GT++V   N + E  +GRK+SK+YRALA GI+++DEVVI QPIG +RY GVA+GLY+A
Sbjct: 182 AEGTSLVGSGNLDQECGTGRKLSKIYRALADGIVEEDEVVIKQPIGVVRYPGVAQGLYVA 241

Query: 707 SSSGKPA 727
           S  GKPA
Sbjct: 242 SPEGKPA 248


>ref|XP_003591952.1| RNA pseudourine synthase [Medicago truncatula]
           gi|358349060|ref|XP_003638558.1| RNA pseudourine
           synthase [Medicago truncatula]
           gi|355481000|gb|AES62203.1| RNA pseudourine synthase
           [Medicago truncatula] gi|355504493|gb|AES85696.1| RNA
           pseudourine synthase [Medicago truncatula]
          Length = 371

 Score =  320 bits (820), Expect = 2e-85
 Identities = 153/238 (64%), Positives = 192/238 (80%), Gaps = 4/238 (1%)
 Frame = +2

Query: 29  GVKWPDFNGGLTYADTVKPNTSCCTLISFYSTKHSSSAPFQGWLQRIQNGQITIDGQIEK 208
           G+ WP+FN GL+Y D V+P+ +  TLI FYSTK+ SSAP QGWLQRI++ QIT+D ++  
Sbjct: 8   GIPWPEFNDGLSYDDVVRPSDAGLTLIEFYSTKYKSSAPLQGWLQRIKSDQITLDARVVT 67

Query: 209 NPDTILREGLELVYHRIPWKEPDAPYLLDVLYEDNHLVALNKPSGIQVLPGGLFQQRTVL 388
           +P+TILR G +LVYHRIPWKEPDAP+ ++VLYED+ ++ALNKPSG+QVLPGGLFQQRTVL
Sbjct: 68  DPNTILRVGSKLVYHRIPWKEPDAPHTIEVLYEDDDIIALNKPSGLQVLPGGLFQQRTVL 127

Query: 389 TQLQWRGGK----SGDQEPHPVPVHRLGRGTSGILLCAKSKLAKTRLSAYFADGTAVVHE 556
           TQLQW           Q+PHPVPVHRLGRGTSGILLCAK+KLA+ RL++YFADGT+ +  
Sbjct: 128 TQLQWETNNKSTIEAHQKPHPVPVHRLGRGTSGILLCAKTKLARARLASYFADGTSRIEG 187

Query: 557 KNTNTERSGRKISKLYRALATGIIDKDEVVISQPIGAMRYAGVAKGLYMASSSGKPAL 730
           K    +  G KI+K+YRAL +GII+ D+V I+QPIG ++Y GVAKGLY+AS SGKPAL
Sbjct: 188 KGHTNQELG-KIAKIYRALVSGIINNDQVTINQPIGMVKYPGVAKGLYVASQSGKPAL 244