BLASTX nr result

ID: Papaver23_contig00025277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025277
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]    83   3e-14
emb|CBI23583.3| unnamed protein product [Vitis vinifera]               82   5e-14
ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450...    82   5e-14
ref|XP_002885555.1| hypothetical protein ARALYDRAFT_479829 [Arab...    71   2e-10
gb|AAM67024.1| unknown [Arabidopsis thaliana]                          70   4e-10

>emb|CAN71216.1| hypothetical protein VITISV_033484 [Vitis vinifera]
          Length = 104

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 53/113 (46%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
 Frame = -3

Query: 460 SNGIN*QRRKPTKKANSRLQRRAPTSIQVNPASSFAQGWKVVIPLLSPLDMSPTSPPNGD 281
           S G+N  RR P     SRLQRRAP+S+Q++PA+     WKV IPLLSPL  SP+SP   D
Sbjct: 10  SAGVN--RRPP-----SRLQRRAPSSLQISPAAD----WKVAIPLLSPLATSPSSPKLID 58

Query: 280 RTAEVSSSS---ISTEKDNLIKSNWKHPSAPFHYDPTNNINKPAKQFVPSFVP 131
           RTAEV        + E +  +   W+HP+APF Y+P +        FV SFVP
Sbjct: 59  RTAEVKPKEEPRQTKEGEKPVFKKWQHPAAPFCYEPAS--------FVRSFVP 103


>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 53/113 (46%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = -3

Query: 460  SNGIN*QRRKPTKKANSRLQRRAPTSIQVNPASSFAQGWKVVIPLLSPLDMSPTSPPNGD 281
            S G+N  RR P     SRLQRRAP+S+Q++PA+     WKV IPLLSPL  SP+SP   D
Sbjct: 1193 SAGVN--RRPP-----SRLQRRAPSSLQISPAAD----WKVAIPLLSPLATSPSSPKLID 1241

Query: 280  RTAEVSSSS---ISTEKDNLIKSNWKHPSAPFHYDPTNNINKPAKQFVPSFVP 131
            RTAEV          E +  +   W+HP+APF Y+P +        FV SFVP
Sbjct: 1242 RTAEVKPKEEPRQMKEGEKPVFKKWQHPAAPFCYEPAS--------FVRSFVP 1286


>ref|XP_002284531.1| PREDICTED: uncharacterized protein At4g14450, chloroplastic-like
           [Vitis vinifera]
          Length = 104

 Score = 82.4 bits (202), Expect = 5e-14
 Identities = 53/113 (46%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
 Frame = -3

Query: 460 SNGIN*QRRKPTKKANSRLQRRAPTSIQVNPASSFAQGWKVVIPLLSPLDMSPTSPPNGD 281
           S G+N  RR P     SRLQRRAP+S+Q++PA+     WKV IPLLSPL  SP+SP   D
Sbjct: 10  SAGVN--RRPP-----SRLQRRAPSSLQISPAAD----WKVAIPLLSPLATSPSSPKLID 58

Query: 280 RTAEVSSSS---ISTEKDNLIKSNWKHPSAPFHYDPTNNINKPAKQFVPSFVP 131
           RTAEV          E +  +   W+HP+APF Y+P +        FV SFVP
Sbjct: 59  RTAEVKPKEEPRQMKEGEKPVFKKWQHPAAPFCYEPAS--------FVRSFVP 103


>ref|XP_002885555.1| hypothetical protein ARALYDRAFT_479829 [Arabidopsis lyrata subsp.
           lyrata] gi|297331395|gb|EFH61814.1| hypothetical protein
           ARALYDRAFT_479829 [Arabidopsis lyrata subsp. lyrata]
          Length = 102

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 42/103 (40%), Positives = 60/103 (58%)
 Frame = -3

Query: 439 RRKPTKKANSRLQRRAPTSIQVNPASSFAQGWKVVIPLLSPLDMSPTSPPNGDRTAEVSS 260
           RR+P     SRLQ+R P ++++ PA+  A  WK  IPLLSPL +SP S P      E  +
Sbjct: 14  RRQP-----SRLQKRPP-ALKLVPATPAANNWKTAIPLLSPLALSPESSPVEQPPVENQT 67

Query: 259 SSISTEKDNLIKSNWKHPSAPFHYDPTNNINKPAKQFVPSFVP 131
           ++ + EK  + K  W+HP+APF+Y+        +  FVP FVP
Sbjct: 68  TAKAVEKTPVFK-KWQHPAAPFYYE--------SSTFVPPFVP 101


>gb|AAM67024.1| unknown [Arabidopsis thaliana]
          Length = 107

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 42/104 (40%), Positives = 61/104 (58%), Gaps = 1/104 (0%)
 Frame = -3

Query: 439 RRKPTKKANSRLQRRAPTSIQVNPASSFAQGWKVVIPLLSPLDMSPTSPPNGDRTAEVS- 263
           RR+P     SRLQ+R P ++++ PA+  A  W   IPLLSPL +SP S P      E + 
Sbjct: 18  RRQP-----SRLQKRPP-ALKIVPATPAANNWNTAIPLLSPLALSPESSPVDQPPVEKNQ 71

Query: 262 SSSISTEKDNLIKSNWKHPSAPFHYDPTNNINKPAKQFVPSFVP 131
           S++++ EK  + K  W+HP+APF+Y+        +  FVP FVP
Sbjct: 72  STAVAVEKTPVFKK-WQHPAAPFYYE--------SSTFVPPFVP 106


Top