BLASTX nr result

ID: Papaver23_contig00025256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025256
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li...   267   2e-69
emb|CBI24290.3| unnamed protein product [Vitis vinifera]              266   3e-69
ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-li...   265   1e-68
ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [S...   261   1e-67
ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-li...   260   2e-67

>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 981

 Score =  267 bits (683), Expect = 2e-69
 Identities = 137/200 (68%), Positives = 151/200 (75%)
 Frame = -2

Query: 601 FMNFGERKDPPHKGEKEVPEGAPDCLVGKTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 422
           FMNFGERKDPPHKGEKEVPEGAPDCL G TFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 194 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 253

Query: 421 SKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLFDLISKSKPMKAPPQELKNTLGKGAT 242
           SKKTNYLL DEDIGGRKS KAKELGT FLTEDGLFD+I  S     P Q+ K ++ K   
Sbjct: 254 SKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASGKKAPPRQDPKKSVVKSEE 313

Query: 241 SQPKGSPLKVVKGNEVSPSVEKKTPPKGSAQGVSPAKRKTQAAGGSSLTWPEKYKPKTPN 62
           S  K +  KV           +    K  A G SPAK+K+  A  S+LTW EKY+PK PN
Sbjct: 314 SPTKKNFQKV-----------QAKSHKDLAAGASPAKQKSGTAEFSNLTWTEKYRPKVPN 362

Query: 61  DILGNQTLVKQLHEWLSHWN 2
           DI+GNQ+LVKQLH+WL+HWN
Sbjct: 363 DIIGNQSLVKQLHDWLAHWN 382


>emb|CBI24290.3| unnamed protein product [Vitis vinifera]
          Length = 941

 Score =  266 bits (681), Expect = 3e-69
 Identities = 141/202 (69%), Positives = 154/202 (76%), Gaps = 2/202 (0%)
 Frame = -2

Query: 601 FMNFGERKDPPHKGEKEVPEGAPDCLVGKTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 422
           FMNFGERKDPPHKGEKEVPEGA DCL G TFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 158 FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217

Query: 421 SKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLFDLISKSKPMKAPPQ-ELKNTLGKGA 245
           SKKTN+LL DEDIGG KS KAKELGTAFLTEDGLFD+I  S   KAP + E K +L K  
Sbjct: 218 SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGEPKKSLDKVV 277

Query: 244 TSQPKGSPLKVVKG-NEVSPSVEKKTPPKGSAQGVSPAKRKTQAAGGSSLTWPEKYKPKT 68
            + PK SP KV K  ++V  S  K+T         +  K   Q  G +SLTW EKYKPK 
Sbjct: 278 LATPKKSPQKVEKKVDQVVNSSGKRT-----VLAATTPKHIYQTIGHASLTWTEKYKPKV 332

Query: 67  PNDILGNQTLVKQLHEWLSHWN 2
           PNDI+GNQ+LVKQLHEWL+HWN
Sbjct: 333 PNDIIGNQSLVKQLHEWLAHWN 354


>ref|XP_002265891.2| PREDICTED: replication factor C subunit 1-like [Vitis vinifera]
          Length = 933

 Score =  265 bits (676), Expect = 1e-68
 Identities = 140/201 (69%), Positives = 151/201 (75%), Gaps = 1/201 (0%)
 Frame = -2

Query: 601 FMNFGERKDPPHKGEKEVPEGAPDCLVGKTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 422
           FMNFGERKDPPHKGEKEVPEGA DCL G TFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 158 FMNFGERKDPPHKGEKEVPEGASDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 217

Query: 421 SKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLFDLISKSKPMKAPPQ-ELKNTLGKGA 245
           SKKTN+LL DEDIGG KS KAKELGTAFLTEDGLFD+I  S   KAP + E K +L K  
Sbjct: 218 SKKTNFLLCDEDIGGNKSAKAKELGTAFLTEDGLFDMICASNHAKAPARGEPKKSLDKVV 277

Query: 244 TSQPKGSPLKVVKGNEVSPSVEKKTPPKGSAQGVSPAKRKTQAAGGSSLTWPEKYKPKTP 65
            + PK SP K          VEKK   K +    +  K   Q  G +SLTW EKYKPK P
Sbjct: 278 LATPKKSPQK----------VEKK--GKRTVLAATTPKHIYQTIGHASLTWTEKYKPKVP 325

Query: 64  NDILGNQTLVKQLHEWLSHWN 2
           NDI+GNQ+LVKQLHEWL+HWN
Sbjct: 326 NDIIGNQSLVKQLHEWLAHWN 346


>ref|XP_002462723.1| hypothetical protein SORBIDRAFT_02g030910 [Sorghum bicolor]
           gi|241926100|gb|EER99244.1| hypothetical protein
           SORBIDRAFT_02g030910 [Sorghum bicolor]
          Length = 1025

 Score =  261 bits (667), Expect = 1e-67
 Identities = 134/202 (66%), Positives = 152/202 (75%), Gaps = 2/202 (0%)
 Frame = -2

Query: 601 FMNFGERKDPPHKGEKEVPEGAPDCLVGKTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 422
           FMNFGERKDPPHKGEKEVPEGAPDCL G TFVISGTLDSLEREEA DLIKR+GGRVTGS+
Sbjct: 241 FMNFGERKDPPHKGEKEVPEGAPDCLSGLTFVISGTLDSLEREEAADLIKRYGGRVTGSI 300

Query: 421 SKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLFDLISKSKPMKAP--PQELKNTLGKG 248
           SKKT+YLLADED+GG KS KAK+LG  FLTEDGLFDLI KSKP KAP   Q+  N+  K 
Sbjct: 301 SKKTSYLLADEDLGGVKSNKAKDLGVPFLTEDGLFDLIRKSKPAKAPVDKQQSNNSFEKL 360

Query: 247 ATSQPKGSPLKVVKGNEVSPSVEKKTPPKGSAQGVSPAKRKTQAAGGSSLTWPEKYKPKT 68
             SQ K SP KV K  E S +V K      +A   S  K+K +     S+ W EKY+PK 
Sbjct: 361 QKSQTKSSPAKVEKRAEAS-AVGKSIASNSNAASASADKQKPKNVDRGSMQWTEKYRPKV 419

Query: 67  PNDILGNQTLVKQLHEWLSHWN 2
           PNDI+GNQ++VKQLH+WL  W+
Sbjct: 420 PNDIVGNQSMVKQLHDWLKSWD 441


>ref|XP_003527511.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 947

 Score =  260 bits (665), Expect = 2e-67
 Identities = 139/202 (68%), Positives = 148/202 (73%), Gaps = 2/202 (0%)
 Frame = -2

Query: 601 FMNFGERKDPPHKGEKEVPEGAPDCLVGKTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 422
           FMNFGERKDPPHKGEKEVPEGAPDCL G TFVISGTLDSLEREEAEDLIKRHGGRVTGSV
Sbjct: 170 FMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSV 229

Query: 421 SKKTNYLLADEDIGGRKSEKAKELGTAFLTEDGLFDLISKSKPMKAPPQELKNTLGK--G 248
           SKKTNYLL DEDIGGRKSEKAKELGT+FLTEDGLFD+I  SKP KA  QE K  + K   
Sbjct: 230 SKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKASSQEDKKLVNKAVA 289

Query: 247 ATSQPKGSPLKVVKGNEVSPSVEKKTPPKGSAQGVSPAKRKTQAAGGSSLTWPEKYKPKT 68
             SQ K SP   VKG  +S     ++P K        AK KT     SS  W EKY+PK 
Sbjct: 290 VASQSKVSPKSQVKGKPLS----SRSPSK-------QAKPKTATTVQSSSMWTEKYRPKD 338

Query: 67  PNDILGNQTLVKQLHEWLSHWN 2
           P DI+GNQ+LV QL  WL  WN
Sbjct: 339 PKDIIGNQSLVLQLRNWLKAWN 360


Top