BLASTX nr result

ID: Papaver23_contig00025129 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025129
         (1709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-a...   568   e-159
ref|XP_002308876.1| chromatin remodeling complex subunit [Populu...   544   e-152
ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|2026...   530   e-148
sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related m...   530   e-148
ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis ...   523   e-146

>ref|XP_002277489.1| PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent
            regulator of chromatin subfamily A member 3-like 1-like
            [Vitis vinifera]
          Length = 874

 Score =  568 bits (1465), Expect = e-159
 Identities = 295/446 (66%), Positives = 347/446 (77%), Gaps = 5/446 (1%)
 Frame = +2

Query: 2    FRVILDEAHVIKNEKSSQAVAVLSLKALRRWVVTGTPILNGAYDLYSLVAFLKFEPLSVK 181
            +RVILDEAH+IKN  + Q+ AV +L+A RRWVVTGTPI NG +DL+SL+AFL+FEP S+K
Sbjct: 427  WRVILDEAHMIKNVNAQQSQAVTNLRAKRRWVVTGTPIQNGTFDLFSLMAFLRFEPFSIK 486

Query: 182  SYWQTLVQQPLDKGQSIGLSRLQNIMASLSLRRHKDDGLVELPPKTVETCLVELSVEERD 361
            SYWQ+LVQ+PL +G+  GLSRLQ +MA++SLRR KD GL+ LPPK+VETC VELS EER+
Sbjct: 487  SYWQSLVQRPLGQGKEKGLSRLQVLMATISLRRTKDKGLIGLPPKSVETCFVELSAEERE 546

Query: 362  KYDQMLMDYQNVVRNYIHRGSVVLNYSRLLSIVLRLRQICNDVTLCPTE--ELLPSYNIE 535
             YDQM  + + V+R+YI  GSV+ NYS +L I+LRLRQIC DV LCP++   LL S NIE
Sbjct: 547  LYDQMEAEGKCVIRDYIDAGSVMRNYSTVLGIILRLRQICTDVALCPSDLRSLLLSNNIE 606

Query: 536  DVSSNPELLQKLVSILQDGDDFDCPICISPPTGTIITCCAHIFCKSCILKAIQKNS-CCP 712
            DVS+NPELL+K+V +LQDG+DFDCPICISPPT  +ITCCAHIFC+ CILK +++   CCP
Sbjct: 607  DVSNNPELLKKMVLVLQDGEDFDCPICISPPTNIVITCCAHIFCRVCILKTLKRTKPCCP 666

Query: 713  LCRHSLSESDLFSAPPXXXXXXXXXXXXXXXXXXXXXXXXALLKLLIASRNENPSRKSVV 892
            LCRH LS+SDLFSAPP                         LLK L ASR++NPS KSVV
Sbjct: 667  LCRHPLSQSDLFSAPP---ESTETDNSEIPSSECTSSKVLTLLKFLSASRDQNPSTKSVV 723

Query: 893  FSQFRKMLVLLERPLKNAGFKILRLDGSMTATRRGKVIKEFENQGSDSATVLLASLKASG 1072
            FSQFRKML+LLE+PLK AGFK LRLDGSM A RR +VI+EF   G +  TVLLASLKASG
Sbjct: 724  FSQFRKMLLLLEQPLKAAGFKTLRLDGSMNAKRRAQVIEEFGAPGPNGPTVLLASLKASG 783

Query: 1073 TGINLTAASRVYLFEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIVENSIEERILELQSG 1252
             GINLTAASRVYL EPWWNPAVEEQAMDRVHRIGQKEDVKIVRLI  NSIEERILELQ  
Sbjct: 784  AGINLTAASRVYLLEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIARNSIEERILELQER 843

Query: 1253 KKNLGSQ--GSRKNKDTRQMGGEDIR 1324
            KK L  +  G R  KD R++G ED+R
Sbjct: 844  KKKLAKEAFGRRGLKDRREVGVEDLR 869


>ref|XP_002308876.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222854852|gb|EEE92399.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 799

 Score =  544 bits (1401), Expect = e-152
 Identities = 284/445 (63%), Positives = 340/445 (76%), Gaps = 5/445 (1%)
 Frame = +2

Query: 5    RVILDEAHVIKNEKSSQAVAVLSLKALRRWVVTGTPILNGAYDLYSLVAFLKFEPLSVKS 184
            RVILDEAHVIKN  S Q+ AV  L A RRWVVTGTPI NG+ DL+SL+AFL+FEP S+KS
Sbjct: 353  RVILDEAHVIKNANSQQSRAVTKLNAKRRWVVTGTPIQNGSLDLFSLMAFLRFEPFSIKS 412

Query: 185  YWQTLVQQPLDKGQSIGLSRLQNIMASLSLRRHKDDGLVELPPKTVETCLVELSVEERDK 364
            YWQ+L+Q+PL +G   GLSRLQ +MA++SLRR KD G+V LP KTVET  +ELS EER+ 
Sbjct: 413  YWQSLLQRPLAQGNKKGLSRLQVLMATISLRRTKDKGVVGLPSKTVETHYIELSGEEREL 472

Query: 365  YDQMLMDYQNVVRNYIHRGSVVLNYSRLLSIVLRLRQICNDVTLCPTE--ELLPSYNIED 538
            YDQM  + + VV+N+I+  +++ N+S +L I+LRLRQICND+ LCP++   LLPS +IED
Sbjct: 473  YDQMEAEAKGVVQNFINTNNLMRNFSTVLCIILRLRQICNDLALCPSDLRSLLPSNSIED 532

Query: 539  VSSNPELLQKLVSILQDGDDFDCPICISPPTGTIITCCAHIFCKSCILKAIQK-NSCCPL 715
            VS+NPELL K+V++LQDG+DFDCPICI PPT T+IT CAHIFC+ CILK +Q+   CCPL
Sbjct: 533  VSNNPELLMKMVTVLQDGEDFDCPICICPPTETVITRCAHIFCRPCILKTLQRAKQCCPL 592

Query: 716  CRHSLSESDLFSAPPXXXXXXXXXXXXXXXXXXXXXXXXALLKLLIASRNENPSRKSVVF 895
            CR  LS SDLFSAPP                        AL+KLLIASR ENP+RKSVVF
Sbjct: 593  CRRPLSVSDLFSAPPESSGSDNANTSSRTTTSSKVS---ALIKLLIASRVENPARKSVVF 649

Query: 896  SQFRKMLVLLERPLKNAGFKILRLDGSMTATRRGKVIKEFENQGSDSATVLLASLKASGT 1075
            SQF+KMLVLLE PLK AGFKILRLDGSM A +R +VIK+F   G D  TVLLASLKASG 
Sbjct: 650  SQFQKMLVLLEEPLKEAGFKILRLDGSMNAKKRAQVIKQFGVPGPDGPTVLLASLKASGA 709

Query: 1076 GINLTAASRVYLFEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIVENSIEERILELQSGK 1255
            GINL  ASRVYL EPWWNPAVEEQAMDRVHRIGQ+EDV +VRLI ++SIEERILE+Q  K
Sbjct: 710  GINLAVASRVYLLEPWWNPAVEEQAMDRVHRIGQEEDVTVVRLIAQSSIEERILEMQERK 769

Query: 1256 KNLGSQ--GSRKNKDTRQMGGEDIR 1324
            K L  +  G R  K  R++G +D+R
Sbjct: 770  KKLAKEAFGRRGTKTQREVGIDDLR 794


>ref|NP_196132.2| DNA/RNA helicase [Arabidopsis thaliana] gi|20260624|gb|AAM13210.1|
            helicase-like transcription factor-like protein
            [Arabidopsis thaliana] gi|31711770|gb|AAP68241.1|
            At5g05130 [Arabidopsis thaliana]
            gi|332003449|gb|AED90832.1| DNA/RNA helicase [Arabidopsis
            thaliana]
          Length = 862

 Score =  530 bits (1366), Expect = e-148
 Identities = 272/444 (61%), Positives = 336/444 (75%), Gaps = 5/444 (1%)
 Frame = +2

Query: 5    RVILDEAHVIKNEKSSQAVAVLSLKALRRWVVTGTPILNGAYDLYSLVAFLKFEPLSVKS 184
            R+ILDEAH IKN  + Q+  V  LKA RRW VTGTPI NG++DLYSL+AFL+FEP S+KS
Sbjct: 414  RIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKS 473

Query: 185  YWQTLVQQPLDKGQSIGLSRLQNIMASLSLRRHKDDGLVELPPKTVETCLVELSVEERDK 364
            YWQ+L+Q+PL +G   GLSRLQ +MA++SLRR K+  L+ LPPKTVETC VELS EER  
Sbjct: 474  YWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQL 533

Query: 365  YDQMLMDYQNVVRNYIHRGSVVLNYSRLLSIVLRLRQICNDVTLCPTE--ELLPSYNIED 538
            YD M  + + VV+N I+ GS++ NYS +LSI+LRLRQ+C+D++LCP E      S ++ED
Sbjct: 534  YDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVED 593

Query: 539  VSSNPELLQKLVSILQDGDDFDCPICISPPTGTIITCCAHIFCKSCILKAIQKNS-CCPL 715
            V+  PELLQKLV+ LQDG+DFDCPICISPPT  IIT CAHIFC++CIL+ +Q++   CPL
Sbjct: 594  VTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPL 653

Query: 716  CRHSLSESDLFSAPPXXXXXXXXXXXXXXXXXXXXXXXXALLKLLIASRNENPSRKSVVF 895
            CR SL++SDL++APP                        ALL LL+ASR ENP+ KSVVF
Sbjct: 654  CRGSLTQSDLYNAPP-PPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVF 712

Query: 896  SQFRKMLVLLERPLKNAGFKILRLDGSMTATRRGKVIKEFENQGSDSATVLLASLKASGT 1075
            SQFRKML+LLE PLK AGF ILRLDG+MT  +R +VI EF N       VLLASLKASGT
Sbjct: 713  SQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGT 772

Query: 1076 GINLTAASRVYLFEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIVENSIEERILELQSGK 1255
            GINLTAASRVYLF+PWWNPAVEEQAMDR+HRIGQK++VK++R+I  NSIEER+LELQ  K
Sbjct: 773  GINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKK 832

Query: 1256 KNLGSQG--SRKNKDTRQMGGEDI 1321
            KNL ++    R+ KD R++  ED+
Sbjct: 833  KNLANEAFKRRQKKDEREVNVEDV 856


>sp|Q9FF61.1|SM3L1_ARATH RecName: Full=Putative SWI/SNF-related matrix-associated
            actin-dependent regulator of chromatin subfamily A member
            3-like 1; Short=SMARCA3-like protein 1
            gi|10178052|dbj|BAB11535.1| helicase-like transcription
            factor-like protein [Arabidopsis thaliana]
          Length = 881

 Score =  530 bits (1366), Expect = e-148
 Identities = 272/444 (61%), Positives = 336/444 (75%), Gaps = 5/444 (1%)
 Frame = +2

Query: 5    RVILDEAHVIKNEKSSQAVAVLSLKALRRWVVTGTPILNGAYDLYSLVAFLKFEPLSVKS 184
            R+ILDEAH IKN  + Q+  V  LKA RRW VTGTPI NG++DLYSL+AFL+FEP S+KS
Sbjct: 433  RIILDEAHTIKNANAQQSRVVCKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKS 492

Query: 185  YWQTLVQQPLDKGQSIGLSRLQNIMASLSLRRHKDDGLVELPPKTVETCLVELSVEERDK 364
            YWQ+L+Q+PL +G   GLSRLQ +MA++SLRR K+  L+ LPPKTVETC VELS EER  
Sbjct: 493  YWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQL 552

Query: 365  YDQMLMDYQNVVRNYIHRGSVVLNYSRLLSIVLRLRQICNDVTLCPTE--ELLPSYNIED 538
            YD M  + + VV+N I+ GS++ NYS +LSI+LRLRQ+C+D++LCP E      S ++ED
Sbjct: 553  YDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDMSLCPPELRSFTTSTSVED 612

Query: 539  VSSNPELLQKLVSILQDGDDFDCPICISPPTGTIITCCAHIFCKSCILKAIQKNS-CCPL 715
            V+  PELLQKLV+ LQDG+DFDCPICISPPT  IIT CAHIFC++CIL+ +Q++   CPL
Sbjct: 613  VTDKPELLQKLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPL 672

Query: 716  CRHSLSESDLFSAPPXXXXXXXXXXXXXXXXXXXXXXXXALLKLLIASRNENPSRKSVVF 895
            CR SL++SDL++APP                        ALL LL+ASR ENP+ KSVVF
Sbjct: 673  CRGSLTQSDLYNAPP-PPPDSSNTDGEDAKSSTKSSKVSALLSLLMASRQENPNTKSVVF 731

Query: 896  SQFRKMLVLLERPLKNAGFKILRLDGSMTATRRGKVIKEFENQGSDSATVLLASLKASGT 1075
            SQFRKML+LLE PLK AGF ILRLDG+MT  +R +VI EF N       VLLASLKASGT
Sbjct: 732  SQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGNPELTGPVVLLASLKASGT 791

Query: 1076 GINLTAASRVYLFEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIVENSIEERILELQSGK 1255
            GINLTAASRVYLF+PWWNPAVEEQAMDR+HRIGQK++VK++R+I  NSIEER+LELQ  K
Sbjct: 792  GINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLELQQKK 851

Query: 1256 KNLGSQG--SRKNKDTRQMGGEDI 1321
            KNL ++    R+ KD R++  ED+
Sbjct: 852  KNLANEAFKRRQKKDEREVNVEDV 875


>ref|XP_002871139.1| SNF2 domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297316976|gb|EFH47398.1| SNF2 domain-containing
            protein [Arabidopsis lyrata subsp. lyrata]
          Length = 861

 Score =  523 bits (1348), Expect = e-146
 Identities = 268/444 (60%), Positives = 334/444 (75%), Gaps = 5/444 (1%)
 Frame = +2

Query: 5    RVILDEAHVIKNEKSSQAVAVLSLKALRRWVVTGTPILNGAYDLYSLVAFLKFEPLSVKS 184
            R+ILDEAH IKN  + Q+  V  LKA RRW VTGTPI NG++DLYSL+AFL+FEP S+KS
Sbjct: 413  RIILDEAHTIKNANAQQSRVVSKLKASRRWAVTGTPIQNGSFDLYSLMAFLRFEPFSIKS 472

Query: 185  YWQTLVQQPLDKGQSIGLSRLQNIMASLSLRRHKDDGLVELPPKTVETCLVELSVEERDK 364
            YWQ+L+Q+PL +G   GLSRLQ +MA++SLRR K+  L+ LPPKTVETC VELS EER  
Sbjct: 473  YWQSLIQRPLGQGNKKGLSRLQVLMATISLRRTKEKSLIGLPPKTVETCYVELSPEERQL 532

Query: 365  YDQMLMDYQNVVRNYIHRGSVVLNYSRLLSIVLRLRQICNDVTLCPTE--ELLPSYNIED 538
            YD M  + + VV+N I+ GS++ NYS +LSI+LRLRQ+C+D++LCP E      S ++ED
Sbjct: 533  YDHMEGEAKGVVQNLINNGSLMRNYSTVLSIILRLRQLCDDISLCPPELRSFTTSTSVED 592

Query: 539  VSSNPELLQKLVSILQDGDDFDCPICISPPTGTIITCCAHIFCKSCILKAIQKNS-CCPL 715
            V   PELLQKL+++LQDG+DFDCPICISPPT  IIT CAHIFC++CIL+ +Q++   CPL
Sbjct: 593  VIDKPELLQKLIAVLQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPL 652

Query: 716  CRHSLSESDLFSAPPXXXXXXXXXXXXXXXXXXXXXXXXALLKLLIASRNENPSRKSVVF 895
            CR SL++SDL++APP                        ALL LLIASR E+P+ KSVVF
Sbjct: 653  CRGSLTQSDLYNAPP-PPPDDSNTDGEDTKSSTKSSKVSALLSLLIASRQESPNTKSVVF 711

Query: 896  SQFRKMLVLLERPLKNAGFKILRLDGSMTATRRGKVIKEFENQGSDSATVLLASLKASGT 1075
            SQFRKML+LLE PLK AGF ILRLDG+MT  +R +VI EF N       VLLASLKASG 
Sbjct: 712  SQFRKMLLLLETPLKAAGFTILRLDGAMTLKKRTQVIGEFGNPELTGPVVLLASLKASGA 771

Query: 1076 GINLTAASRVYLFEPWWNPAVEEQAMDRVHRIGQKEDVKIVRLIVENSIEERILELQSGK 1255
            GINLTAASRVYL +PWWNPAVEEQAMDR+HRIGQK++VK++R+I  +SIEER+LELQ  K
Sbjct: 772  GINLTAASRVYLLDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARDSIEERVLELQQKK 831

Query: 1256 KNLGSQG--SRKNKDTRQMGGEDI 1321
            KNL ++    R+ KD R++  ED+
Sbjct: 832  KNLANEAFKRRQKKDEREVNVEDV 855


Top