BLASTX nr result

ID: Papaver23_contig00025097 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025097
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ri...   135   3e-30
ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-...   135   4e-30
ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-...   134   1e-29
ref|XP_004141606.1| PREDICTED: tryptophan synthase beta chain 2-...   134   1e-29
emb|CBI16881.3| unnamed protein product [Vitis vinifera]              132   5e-29

>ref|XP_002531484.1| tryptophan synthase beta chain, putative [Ricinus communis]
           gi|223528911|gb|EEF30908.1| tryptophan synthase beta
           chain, putative [Ricinus communis]
          Length = 212

 Score =  135 bits (341), Expect = 3e-30
 Identities = 68/127 (53%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
 Frame = -1

Query: 373 GEQQWMGRFSPNKKLNHLKC---FKASVTTSSMNNSRSVEIPRQWYNLVADXXXXXXXXX 203
           G+++W+G F+ N K +  K     +A    S   + ++++IPRQWYNLV+D         
Sbjct: 24  GKEKWLGGFALNTKSSPSKFSNGLRARAKASLNADQKAIQIPRQWYNLVSDLPVKPPPAL 83

Query: 202 XXXXXXPVQPQDLSPLFPDELIRQEASTERFIQIPDEVVDIYSLWRPTPLIRAKRLEKLL 23
                 PV+P+DL+PLFPDELI+QEAS E+FI IP+EV+DIY LWRPTPLIRAKRLEKLL
Sbjct: 84  NPKTHEPVKPEDLAPLFPDELIKQEASNEKFIDIPEEVLDIYELWRPTPLIRAKRLEKLL 143

Query: 22  GTPARIY 2
            TPA+IY
Sbjct: 144 DTPAKIY 150


>ref|XP_004141605.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  135 bits (340), Expect = 4e-30
 Identities = 73/123 (59%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
 Frame = -1

Query: 367 QQWMGRFSPNKKLNHLKCFKASVTTSSMN-NSRSVEIPRQWYNLVADXXXXXXXXXXXXX 191
           +Q  G  S  +   HL+      T ++ N N +SVE+PRQWYNLVAD             
Sbjct: 7   EQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKSVEVPRQWYNLVADLPVKPPPPLHPKT 66

Query: 190 XXPVQPQDLSPLFPDELIRQEASTERFIQIPDEVVDIYSLWRPTPLIRAKRLEKLLGTPA 11
             P++P+DLS LFPDELI+QEASTER+I IPDEVVDIY LWRPTPLIRAKRLEKLL TPA
Sbjct: 67  YEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPA 126

Query: 10  RIY 2
           RIY
Sbjct: 127 RIY 129


>ref|XP_004156228.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 482

 Score =  134 bits (337), Expect = 1e-29
 Identities = 72/123 (58%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
 Frame = -1

Query: 367 QQWMGRFSPNKKLNHLKCFKASVTTSSMN-NSRSVEIPRQWYNLVADXXXXXXXXXXXXX 191
           +Q  G  S  +   HL+      T ++ N N ++VE+PRQWYNLVAD             
Sbjct: 7   EQLPGCLSLKRVPAHLRFSNGYRTKAASNPNLKAVEVPRQWYNLVADLPVKPPPPLHPKT 66

Query: 190 XXPVQPQDLSPLFPDELIRQEASTERFIQIPDEVVDIYSLWRPTPLIRAKRLEKLLGTPA 11
             P++P+DLS LFPDELI+QEASTER+I IPDEVVDIY LWRPTPLIRAKRLEKLL TPA
Sbjct: 67  YEPIKPEDLSHLFPDELIKQEASTERYINIPDEVVDIYGLWRPTPLIRAKRLEKLLDTPA 126

Query: 10  RIY 2
           RIY
Sbjct: 127 RIY 129


>ref|XP_004141606.1| PREDICTED: tryptophan synthase beta chain 2-like [Cucumis sativus]
          Length = 600

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
 Frame = -1

Query: 367 QQWMGRFSPNKKLNHLKCFKASVTTSSMN-NSRSVEIPRQWYNLVADXXXXXXXXXXXXX 191
           +Q  GRFS  +   HL+      T ++ N N +SVE+PRQWYNLVAD             
Sbjct: 125 KQLPGRFSLKRTPRHLRFSNGYRTKAASNPNLKSVEVPRQWYNLVADLPVKPPPPLHSKT 184

Query: 190 XXPVQPQDLSPLFPDELIRQEASTERFIQIPDEVVDIYSLWRPTPLIRAKRLEKLLGTPA 11
             P++P+DLS L+ DELI+QE ST+R+I IPDEVVDIY LWRPTPLIRAKRLEKLL TPA
Sbjct: 185 LEPLKPEDLSHLYADELIKQETSTDRYINIPDEVVDIYELWRPTPLIRAKRLEKLLDTPA 244

Query: 10  RIY 2
           RIY
Sbjct: 245 RIY 247


>emb|CBI16881.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  132 bits (331), Expect = 5e-29
 Identities = 74/149 (49%), Positives = 95/149 (63%)
 Frame = -1

Query: 448 LMAASLVPAAASTNTSQLQLKQKSSGEQQWMGRFSPNKKLNHLKCFKASVTTSSMNNSRS 269
           L++ASL+    S ++    +K    G+   + R SP       +C   +   SS    ++
Sbjct: 5   LLSASLL----SISSPSFSIKVGEQGKPMLL-RASP-------RCRVRARAASSKAGPQA 52

Query: 268 VEIPRQWYNLVADXXXXXXXXXXXXXXXPVQPQDLSPLFPDELIRQEASTERFIQIPDEV 89
           VEIP QWYNL+AD               P++P+DLSPLFPDELI+QEAST+RFI IP+EV
Sbjct: 53  VEIPHQWYNLIADLPVKPPPALHPQTQEPIKPEDLSPLFPDELIKQEASTDRFIAIPEEV 112

Query: 88  VDIYSLWRPTPLIRAKRLEKLLGTPARIY 2
           +D+Y LWRPTPLIRAKRLEKLL TPARIY
Sbjct: 113 IDVYRLWRPTPLIRAKRLEKLLDTPARIY 141


Top