BLASTX nr result

ID: Papaver23_contig00025074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025074
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33509.3| unnamed protein product [Vitis vinifera]              320   2e-85
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ...   318   6e-85
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri...   317   2e-84
ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|2...   317   2e-84
ref|XP_003616296.1| DNA repair protein complementing XP-C cells-...   301   1e-79

>emb|CBI33509.3| unnamed protein product [Vitis vinifera]
          Length = 866

 Score =  320 bits (820), Expect = 2e-85
 Identities = 159/259 (61%), Positives = 189/259 (72%), Gaps = 1/259 (0%)
 Frame = +2

Query: 2    KVGAPLYWAEVFCSGENMTGRWVHVDAVNAIVDGEQKVEAAAAACRRSLRYVVAFAGNGA 181
            K+GAPLYWAEVFC+GEN+TG+WVH+DA+NAI+DGE+KVEAAAAAC+ SLRYVVAF+GNGA
Sbjct: 394  KIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGEEKVEAAAAACKTSLRYVVAFSGNGA 453

Query: 182  KDVTRRYCMKWYQIASKRINSCWWDAVLAPLKDLESVATAGLVHLEASSNNTASSLYKVK 361
            KDVTRRYCMKWY+IAS+RINS WWDAVLAPLK+LE+ A    V                 
Sbjct: 454  KDVTRRYCMKWYRIASQRINSAWWDAVLAPLKELEAGAVGDHVTC--------------- 498

Query: 362  TLEKCSSTEGDVKSSSVQEHPGNCSAIEKHGMKESNHNLMNMGVQSSSQ-CGIATRNSLE 538
                                PG      K G++    N+  +  +SS +   +ATR+SLE
Sbjct: 499  --------------------PG------KLGVEVLKENVKKVRAESSDRNAFVATRDSLE 532

Query: 539  DMELQTRALTEPLPTNQQAYRNHHLYALERWLTKNQILHPKGPILGYCSGHPVYPRNCVQ 718
            DMEL+TRALTEPLPTNQQAY+NH LYA+ERWLTK QILHPKGP+LG+CSGHPVYPR CVQ
Sbjct: 533  DMELETRALTEPLPTNQQAYKNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQ 592

Query: 719  TLHSQHRWLRDALQVKASE 775
            TL ++ RWLR+ LQVKA E
Sbjct: 593  TLKTKQRWLREGLQVKADE 611


>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
            vinifera]
          Length = 1103

 Score =  318 bits (816), Expect = 6e-85
 Identities = 156/258 (60%), Positives = 187/258 (72%)
 Frame = +2

Query: 2    KVGAPLYWAEVFCSGENMTGRWVHVDAVNAIVDGEQKVEAAAAACRRSLRYVVAFAGNGA 181
            K+GAPLYWAEVFC+GEN+TG+WVH+DA+NAI+DGE+KVEAAAAAC+ SLRYVVAF+GNGA
Sbjct: 640  KIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGEEKVEAAAAACKTSLRYVVAFSGNGA 699

Query: 182  KDVTRRYCMKWYQIASKRINSCWWDAVLAPLKDLESVATAGLVHLEASSNNTASSLYKVK 361
            KDVTRRYCMKWY+IAS+RINS WWDAVLAPLK+LE+ A  G+  L+ +            
Sbjct: 700  KDVTRRYCMKWYRIASQRINSAWWDAVLAPLKELEAGAVGGVEVLKEN------------ 747

Query: 362  TLEKCSSTEGDVKSSSVQEHPGNCSAIEKHGMKESNHNLMNMGVQSSSQCGIATRNSLED 541
                                      ++K   + S+ N             +ATR+SLED
Sbjct: 748  --------------------------VKKVRAESSDRNAF-----------VATRDSLED 770

Query: 542  MELQTRALTEPLPTNQQAYRNHHLYALERWLTKNQILHPKGPILGYCSGHPVYPRNCVQT 721
            MEL+TRALTEPLPTNQQAY+NH LYA+ERWLTK QILHPKGP+LG+CSGHPVYPR CVQT
Sbjct: 771  MELETRALTEPLPTNQQAYKNHQLYAMERWLTKYQILHPKGPVLGFCSGHPVYPRTCVQT 830

Query: 722  LHSQHRWLRDALQVKASE 775
            L ++ RWLR+ LQVKA E
Sbjct: 831  LKTKQRWLREGLQVKADE 848


>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
           gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
           rad4, putative [Ricinus communis]
          Length = 683

 Score =  317 bits (812), Expect = 2e-84
 Identities = 157/258 (60%), Positives = 184/258 (71%)
 Frame = +2

Query: 2   KVGAPLYWAEVFCSGENMTGRWVHVDAVNAIVDGEQKVEAAAAACRRSLRYVVAFAGNGA 181
           K+G+PLYWAEV+CSGEN+TG+WVH+DAVNAIVDGEQKVEA+AAAC+ SLRYVVAFAG+GA
Sbjct: 331 KIGSPLYWAEVYCSGENLTGKWVHIDAVNAIVDGEQKVEASAAACKTSLRYVVAFAGHGA 390

Query: 182 KDVTRRYCMKWYQIASKRINSCWWDAVLAPLKDLESVATAGLVHLEASSNNTASSLYKVK 361
           KDVTRRYCMKWY+IAS+RINS WWDAVLAPL++LES AT G                   
Sbjct: 391 KDVTRRYCMKWYKIASQRINSIWWDAVLAPLRELESGATGG------------------- 431

Query: 362 TLEKCSSTEGDVKSSSVQEHPGNCSAIEKHGMKESNHNLMNMGVQSSSQCGIATRNSLED 541
                             E P   + IE  G                    ++TR SLED
Sbjct: 432 -----------------PEVPERKTDIESSGRNSF----------------VSTRTSLED 458

Query: 542 MELQTRALTEPLPTNQQAYRNHHLYALERWLTKNQILHPKGPILGYCSGHPVYPRNCVQT 721
           MEL+TRALTEPLPTNQQAY+NH LYA+ERWLTK QILHP+GP+LG+CSGHPVYPR CVQT
Sbjct: 459 MELETRALTEPLPTNQQAYKNHQLYAIERWLTKYQILHPRGPVLGFCSGHPVYPRACVQT 518

Query: 722 LHSQHRWLRDALQVKASE 775
           L ++HRWLR+ LQ+KA+E
Sbjct: 519 LKTEHRWLREGLQIKANE 536


>ref|XP_002305874.1| predicted protein [Populus trichocarpa] gi|222848838|gb|EEE86385.1|
            predicted protein [Populus trichocarpa]
          Length = 868

 Score =  317 bits (812), Expect = 2e-84
 Identities = 159/258 (61%), Positives = 188/258 (72%)
 Frame = +2

Query: 2    KVGAPLYWAEVFCSGENMTGRWVHVDAVNAIVDGEQKVEAAAAACRRSLRYVVAFAGNGA 181
            K+G+PLYWAEV+CSGEN+TG+WVHVDAV+ IVDGEQKVEAAA AC+ SLRYVVAFAG GA
Sbjct: 405  KIGSPLYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGA 464

Query: 182  KDVTRRYCMKWYQIASKRINSCWWDAVLAPLKDLESVATAGLVHLEASSNNTASSLYKVK 361
            KDVTRRYCMKWY+IAS+R+NS WWDAVLAPL++LES AT G+ HLE    + ++      
Sbjct: 465  KDVTRRYCMKWYKIASQRVNSLWWDAVLAPLRELESGATGGMAHLEKPHADASN------ 518

Query: 362  TLEKCSSTEGDVKSSSVQEHPGNCSAIEKHGMKESNHNLMNMGVQSSSQCGIATRNSLED 541
                              EH                 N++  G+ S +    ATRN++ED
Sbjct: 519  ------------------EH----------------ENVIASGLNSFA----ATRNTIED 540

Query: 542  MELQTRALTEPLPTNQQAYRNHHLYALERWLTKNQILHPKGPILGYCSGHPVYPRNCVQT 721
            MELQTRALTEPLPTNQQAY+NH LYA+E+WLTK QILHPKGPILG+CSGHPVYPR CVQT
Sbjct: 541  MELQTRALTEPLPTNQQAYKNHLLYAIEKWLTKCQILHPKGPILGFCSGHPVYPRACVQT 600

Query: 722  LHSQHRWLRDALQVKASE 775
            L ++ RWLR+ LQVK  E
Sbjct: 601  LRTKERWLREGLQVKVKE 618


>ref|XP_003616296.1| DNA repair protein complementing XP-C cells-like protein [Medicago
            truncatula] gi|355517631|gb|AES99254.1| DNA repair
            protein complementing XP-C cells-like protein [Medicago
            truncatula]
          Length = 1052

 Score =  301 bits (771), Expect = 1e-79
 Identities = 147/258 (56%), Positives = 182/258 (70%)
 Frame = +2

Query: 2    KVGAPLYWAEVFCSGENMTGRWVHVDAVNAIVDGEQKVEAAAAACRRSLRYVVAFAGNGA 181
            KVG+PLYWAEV+CS EN+TG+WVH+DAVN I+DGE KVEA  AAC+ SLRYVVAFAG+GA
Sbjct: 587  KVGSPLYWAEVYCSEENLTGKWVHMDAVNLIIDGEDKVEAMVAACKTSLRYVVAFAGHGA 646

Query: 182  KDVTRRYCMKWYQIASKRINSCWWDAVLAPLKDLESVATAGLVHLEASSNNTASSLYKVK 361
            KDVTRRYCMKWY+IAS+R+NS WW++VLAPL++LES AT G+VH   +            
Sbjct: 647  KDVTRRYCMKWYKIASQRVNSTWWESVLAPLRNLESGATGGVVHSRTN------------ 694

Query: 362  TLEKCSSTEGDVKSSSVQEHPGNCSAIEKHGMKESNHNLMNMGVQSSSQCGIATRNSLED 541
               + S+TE ++  S V                                    TR+S+ED
Sbjct: 695  ---QISATEANMNDSFV-----------------------------------PTRSSIED 716

Query: 542  MELQTRALTEPLPTNQQAYRNHHLYALERWLTKNQILHPKGPILGYCSGHPVYPRNCVQT 721
            +EL+TRALTEPLPTNQQAY+NH LY +E+WLTK QILHPKGP+LG+CSGHPVYPR CVQT
Sbjct: 717  VELETRALTEPLPTNQQAYKNHSLYVIEKWLTKYQILHPKGPVLGFCSGHPVYPRTCVQT 776

Query: 722  LHSQHRWLRDALQVKASE 775
            + ++ RWLR+ LQVK +E
Sbjct: 777  VMTKERWLREGLQVKPNE 794


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