BLASTX nr result

ID: Papaver23_contig00025043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025043
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    83   7e-14
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    83   1e-13
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    82   1e-13
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    82   2e-13

>ref|XP_002331536.1| predicted protein [Populus trichocarpa] gi|222873760|gb|EEF10891.1|
           predicted protein [Populus trichocarpa]
          Length = 435

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 85/306 (27%), Positives = 134/306 (43%), Gaps = 17/306 (5%)
 Frame = -3

Query: 875 PFKFYSVIGSCNGLVCLAETSDFSILNPAFVCNPITKECVRFXXXXXXXXXXXXXXXLSG 696
           PF    V+ SCNGL+ L+   D    NP  VCNPIT+E +                  SG
Sbjct: 119 PFSGIEVVNSCNGLLYLSSYLD---KNPVLVCNPITREYINIPATHTDHQQERLQAVASG 175

Query: 695 FGYCRLKNEYKVVRI----RYYGDEMIAAQGGYVPGHVQIYTLGSGGGWRDKGE----TH 540
            G+    N+YK++RI      +G + + + G       +IYTLG  G WR   +      
Sbjct: 176 LGFSLKSNQYKLLRIFDVGYGHGFDNLRSHG----RQAEIYTLGK-GSWRVIDQFPPRIP 230

Query: 539 HSFVRGSRSVYLNGVCFWL------DSTGMIVAFDFSSEEFQLIG-PPPSRDEFNIVYSN 381
           HSF+ G+   YL G   W       D    I++F+F  E+F+ +  PP S      +   
Sbjct: 231 HSFLFGT---YLKGTISWACANDINDKFDFIISFNFDKEQFEFVSLPPYSAANHKGISDL 287

Query: 380 KLCTLGGCLCIFQQPSSIAGIPGIWVLRKSEGKEQNDIWVKECPLPSIVSWELYRKNTST 201
           ++  LGGC+ +     S A    IW+L+   GK++  IW K+        + ++  +   
Sbjct: 288 RMQGLGGCISVCD--FSCAEYFDIWLLKDFGGKKK--IWSKD--------YRIHMLHGKV 335

Query: 200 VMPFALTKRGEILFKFYSGKTIASYDLKSATPRNNWMLDKVWNRFEAIPHVNTFVSLKAL 21
             P  +    EIL        ++   L+    R+   +  + + F A  H+ +FVSLK +
Sbjct: 336 HQPIRILNNEEILMIQGLNAMVSYNHLRMKLRRHK--ICGIQSHFGASIHIPSFVSLKDI 393

Query: 20  --GEEV 9
             G+EV
Sbjct: 394 VGGDEV 399


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 83.2 bits (204), Expect = 7e-14
 Identities = 79/272 (29%), Positives = 116/272 (42%), Gaps = 25/272 (9%)
 Frame = -3

Query: 863 YSVIGSCNGLVCLAETSDFSILNPAFVCNPITKECVRFXXXXXXXXXXXXXXXLSGFGYC 684
           + V+GSCNGL+CLA   D    +  +V NP T++  +                  GFGY 
Sbjct: 122 FEVVGSCNGLLCLA---DSLFKDAVYVHNPFTRDFKQLPKSLQYPDQEVVF----GFGYH 174

Query: 683 RLKNEYKVVRIRYYGDEMIAAQGGY--------VPGHVQIYTLGSGGGWRDKGETHHSFV 528
            +   YKVV++ YY +      GG+            VQ+ TLGS   WR  G+  +   
Sbjct: 175 PMTEVYKVVKVVYYRN----GYGGFSRFRRITCSQSEVQVLTLGS-PTWRSLGKVSYQLD 229

Query: 527 RGSRSVYLNGVCFWLDS-----TGMIVAFDFSSEEFQLIGPPPSRDEFNIVYSNKLCTLG 363
           R      +NG   W+       T  IV+FD + E+F+ I  P         Y   L  LG
Sbjct: 230 RWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDCGGLSRCNY--HLLVLG 287

Query: 362 GCLCIFQQPSSIAGIPGIWVLRKSEGKEQNDIWVKE----CPLPSIVSWELYRKNT---- 207
           GCL      S+  G   +WV+++ + KE    W+KE      LP  +  ++ R +     
Sbjct: 288 GCLSAAVHRSN--GKLEVWVMKEYDVKES---WIKEFNIGAHLPKGLKQDVNRPHRIWRN 342

Query: 206 ----STVMPFALTKRGEILFKFYSGKTIASYD 123
                 V    L K GEIL + Y G+ + SY+
Sbjct: 343 APKGRGVRLLCLLKNGEILLE-YKGRVLVSYN 373


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 83/301 (27%), Positives = 125/301 (41%), Gaps = 27/301 (8%)
 Frame = -3

Query: 863 YSVIGSCNGLVCLAETSDFSILNPAFVCNPITKECVRFXXXXXXXXXXXXXXXLSGFGYC 684
           + VIGSCNGL+ L ++         ++ NP T +   +                +GFG+ 
Sbjct: 117 FLVIGSCNGLLYLLDSLQ---QRANYIYNPFTSD---YLELPEPGQVLNQHRVATGFGFH 170

Query: 683 RLKNEYKVVRIRYY------GDEMIAAQGGYVPGHVQIYTLGSGG-GWRDKGETHHSFVR 525
               EYKVVR+ YY      G      +       VQ+ T+G+G   WR KGET +  + 
Sbjct: 171 STTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTWRSKGETSYQLLG 230

Query: 524 GSRSVYLNGVCFWL------DSTGMIVAFDFSSEEFQLIGPPPSRDEFNIVYSNKLCTLG 363
               V +NG   WL       S   +++FD + E+F+ + P P    F   + + L TL 
Sbjct: 231 NPSHVVVNGRLHWLSCRYRNQSLRRLISFDLADEQFREV-PCPVGASFG-RHCSHLATLR 288

Query: 362 GCLCIFQQPSSIAGIPG--IWVLRKSEGKEQNDIWVKEC-----------PLPS-IVSWE 225
           GCL        + G     IWV+++   KE    WVKE            P P+  ++ +
Sbjct: 289 GCL-----SGVVQGFRRLYIWVMKEYGVKES---WVKEFTIGVKLPRELEPYPNQSINLQ 340

Query: 224 LYRKNTSTVMPFALTKRGEILFKFYSGKTIASYDLKSATPRNNWMLDKVWNRFEAIPHVN 45
            +    S      L   GEIL +F  G T+  YD KS   +   +   +     AI HV 
Sbjct: 341 EFHLPLSQTKVLCLLNNGEILLEFRCG-TLVCYDTKSGAFKELIIFQDLPEWSNAIVHVG 399

Query: 44  T 42
           +
Sbjct: 400 S 400


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 83/271 (30%), Positives = 115/271 (42%), Gaps = 22/271 (8%)
 Frame = -3

Query: 863 YSVIGSCNGLVCLAETSDFSILNPAFVCNPITKECVRFXXXXXXXXXXXXXXXLSGFGYC 684
           + V+GSCNGL+CL   SD    +  ++ NP T                       GFG+ 
Sbjct: 121 FEVVGSCNGLLCL---SDSLFNDSLYIYNPFTGRYKELPKSLQYPDQEVVF----GFGFN 173

Query: 683 RLKNEYKVVRIRYY----GDEMIAAQGGYVPGHVQIYTLGSGGGWRDKGETHHSFVRGSR 516
              NEYKV+RI YY    G    + +  Y    VQI TLG   GWR  G+  +  VR + 
Sbjct: 174 PKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGC-PGWRSLGKVSYRLVRRAS 232

Query: 515 SVYLNGVCFWLD------STGMIVAFDFSSEEFQLIGPPPSRDEFNIVYSNKLCTLGGCL 354
              +NG   W+           +V+FD + E+F+ + P P     N      L  L GCL
Sbjct: 233 ETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREV-PKPDCGGLNRC-DYHLAVLRGCL 290

Query: 353 CIFQQPSSIAGIPGIWVLRKSEGKEQNDIWVKE----CPLPSIVSWELYR-----KNTS- 204
            +    +   G   IWV+++   KE    WVKE      +P  +   L R     KN S 
Sbjct: 291 SVAVYCN--YGRLEIWVMKEYNVKES---WVKEYNIGAYMPKGLKQNLVRPLKIWKNASN 345

Query: 203 --TVMPFALTKRGEILFKFYSGKTIASYDLK 117
              V    + K GEIL + Y  + + SYD K
Sbjct: 346 GRAVRALCVLKNGEILLE-YKNRALVSYDPK 375


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 90/310 (29%), Positives = 131/310 (42%), Gaps = 30/310 (9%)
 Frame = -3

Query: 881 PAPFKF----YSVIGSCNGLVCLAETSDFSILNPAFVCNPITKECVRFXXXXXXXXXXXX 714
           PAPF      + V+GSCNGL+CL   SD    +  ++ NP T  C +             
Sbjct: 112 PAPFSSMMPEFEVVGSCNGLLCL---SDSLYNDSLYIYNPFT-GCYK---ELPKSLQYPD 164

Query: 713 XXXLSGFGYCRLKNEYKVVRIRYYGDEMIAAQGGYVP--------GHVQIYTLGSGGGWR 558
              +SGFG+     EYKV+RI YY +      GGY            VQI TLG    WR
Sbjct: 165 QEVVSGFGFNPKTKEYKVIRIVYYRN----GHGGYPRSRRIIYPLSEVQILTLGC-PEWR 219

Query: 557 DKGETHHSFVRGSRSVYLNGVCFWLD------STGMIVAFDFSSEEFQLIGPPPSRDEFN 396
             G+  +  VR +    +NG   W+           +V+FD + E+F+ +  P       
Sbjct: 220 SLGKVSYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPDCGGLNR 279

Query: 395 IVYSNKLCTLGGCLCIFQQPSSIAGIPGIWVLRKSEGKEQNDIWVKECPLPSIVSWELYR 216
             Y   L  L GCL      +   G   IWV+++   KE    WVKE  + + +   L +
Sbjct: 280 CNY--HLVVLRGCLSAAVYCN--YGRLEIWVMKEYNVKES---WVKEYNIGAYMPKGLKQ 332

Query: 215 ---------KNTS---TVMPFALTKRGEILFKFYSGKTIASYDLKSATPRNNWMLDKVWN 72
                    KN+S    V    + K GEIL + Y  + + SYD K+   + +  L    N
Sbjct: 333 NQDRQLKIWKNSSNGRVVGALCVLKNGEILLE-YKNRVLVSYDPKNGKFK-DIELQGAPN 390

Query: 71  RFEAIPHVNT 42
            F+ + HV +
Sbjct: 391 WFQTVVHVGS 400


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