BLASTX nr result

ID: Papaver23_contig00025011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00025011
         (565 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-...    66   3e-09
ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-...    66   3e-09
dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea...    65   6e-09
emb|CBI15109.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002514651.1| replication factor A 1, rfa1, putative [Rici...    63   4e-08

>ref|XP_004169647.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 560

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 48/112 (42%), Positives = 63/112 (56%)
 Frame = +1

Query: 160 FTAKGGNMELKAMLQSCKSSDVNSGEFQNLGLILVQDHIHQIIPKAH*KDTRKVIDCFEM 339
           FTA  G M+LKA+L S  +SDV SG  QNLGLI + D+    IP    K  + +I     
Sbjct: 1   FTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDYSLNDIPN---KSEKYLI----- 52

Query: 340 *DCNESSRCRDLY*SQSKMQRLVLKPNRDAGIILKPKQEMVT*SAAQIVHEQ 495
                 ++C  +  +  K  +  +K   +AG ILKPKQE+V  SAAQIVHEQ
Sbjct: 53  -----VTKCEVVSPALEKEVKTEVK-TEEAGTILKPKQELVAKSAAQIVHEQ 98


>ref|XP_004138198.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Cucumis sativus]
          Length = 603

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 48/112 (42%), Positives = 63/112 (56%)
 Frame = +1

Query: 160 FTAKGGNMELKAMLQSCKSSDVNSGEFQNLGLILVQDHIHQIIPKAH*KDTRKVIDCFEM 339
           FTA  G M+LKA+L S  +SDV SG  QNLGLI + D+    IP    K  + +I     
Sbjct: 44  FTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDYSLNDIPN---KSEKYLI----- 95

Query: 340 *DCNESSRCRDLY*SQSKMQRLVLKPNRDAGIILKPKQEMVT*SAAQIVHEQ 495
                 ++C  +  +  K  +  +K   +AG ILKPKQE+V  SAAQIVHEQ
Sbjct: 96  -----VTKCEVVSPALEKEVKTEVK-TEEAGTILKPKQELVAKSAAQIVHEQ 141


>dbj|BAF64713.1| 70 kDa subunit of replication protein A [Ipomoea nil]
          Length = 604

 Score = 65.5 bits (158), Expect = 6e-09
 Identities = 46/112 (41%), Positives = 62/112 (55%)
 Frame = +1

Query: 160 FTAKGGNMELKAMLQSCKSSDVNSGEFQNLGLILVQDHIHQIIPKAH*KDTRKVIDCFEM 339
           FTA  G M+LKA+LQS  SS+V SG  QNLGL+ + D+    IP    K+ + +I     
Sbjct: 44  FTANDGKMKLKAILQSSLSSEVISGSIQNLGLVRILDYTLNDIPM---KNEKYLI----- 95

Query: 340 *DCNESSRCRDLY*SQSKMQRLVLKPNRDAGIILKPKQEMVT*SAAQIVHEQ 495
                 ++C D   S  + +        + GI+L+PKQE V  SAAQIVHEQ
Sbjct: 96  -----VTKC-DAVSSPLEAEYKTGVKTEENGIVLRPKQEFVAKSAAQIVHEQ 141


>emb|CBI15109.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 47/113 (41%), Positives = 64/113 (56%)
 Frame = +1

Query: 157 RFTAKGGNMELKAMLQSCKSSDVNSGEFQNLGLILVQDHIHQIIPKAH*KDTRKVIDCFE 336
           +FTA  G M+LKAM  S  SS++NSG  QNLGLI V D+    IP    K  + +I    
Sbjct: 43  KFTANDGKMKLKAMFPSSFSSEINSGNIQNLGLIQVIDYTLNDIPS---KQEKYLI---- 95

Query: 337 M*DCNESSRCRDLY*SQSKMQRLVLKPNRDAGIILKPKQEMVT*SAAQIVHEQ 495
           +  C   S   ++   +++++R         GI LKPKQE+V  SAAQIV+EQ
Sbjct: 96  VTKCEAVSPALEVE-FKTEVKR--------TGIFLKPKQEIVAKSAAQIVNEQ 139


>ref|XP_002514651.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546255|gb|EEF47757.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 622

 Score = 62.8 bits (151), Expect = 4e-08
 Identities = 44/117 (37%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
 Frame = +1

Query: 160 FTAKGGNMELKAMLQSCKSSDVNSGEFQNLGLILVQDHIHQIIPKAH*K-----DTRKVI 324
           F A  G  ++KA+  S  S+++ SG  QNLGLI + D+    IP              V 
Sbjct: 44  FDANDGKRKIKAIFNSRLSTEIISGNIQNLGLIRILDYTVNEIPSKSENYLIITKCEVVS 103

Query: 325 DCFEM*DCNESSRCRDLY*SQSKMQRLVLKPNRDAGIILKPKQEMVT*SAAQIVHEQ 495
              EM   +E+         + K +  V+K     GI+LKPKQEMV  SAAQIVHEQ
Sbjct: 104 PALEMEIKDEAKTEEAAITLKPKQETQVIKQEVSGGILLKPKQEMVAKSAAQIVHEQ 160


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