BLASTX nr result

ID: Papaver23_contig00024703 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024703
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328438.1| predicted protein [Populus trichocarpa] gi|2...    88   1e-27
emb|CAN77027.1| hypothetical protein VITISV_015338 [Vitis vinifera]    77   1e-23
ref|XP_002280871.2| PREDICTED: uncharacterized protein LOC100259...    77   1e-23
ref|XP_003591102.1| Nucleolar GTPase [Medicago truncatula] gi|35...    82   1e-22
ref|XP_003591103.1| Nucleolar GTPase [Medicago truncatula] gi|35...    82   1e-22

>ref|XP_002328438.1| predicted protein [Populus trichocarpa] gi|222838153|gb|EEE76518.1|
            predicted protein [Populus trichocarpa]
          Length = 1005

 Score = 88.2 bits (217), Expect(2) = 1e-27
 Identities = 45/97 (46%), Positives = 58/97 (59%)
 Frame = +1

Query: 16   QILSACSEELKHGAFIWKQSLEKKVHQQILLLSKSKGQQYILSLXXXXXXXXXXXXSTKL 195
            +ILS C+ ELKHGA IW QSL+K VH QIL  SK +G+ YI++L            S +L
Sbjct: 820  EILSVCARELKHGAIIWTQSLQKDVHDQIL--SKPQGKNYIVALGEIYRVIEVIGSSARL 877

Query: 196  YWPWIVSTLANPAKIIALLEECGAAWLDSKLEEALLS 306
            Y PW++ +  +P  +  LL EC   W  S LEEAL S
Sbjct: 878  YKPWVLVSSTDPMGLFTLLSECSTLWSGSGLEEALQS 914



 Score = 60.1 bits (144), Expect(2) = 1e-27
 Identities = 30/57 (52%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
 Frame = +3

Query: 324  VDNLDVSALQKQVL*EL--ICSISLVLLKAISGMKEVVWNGEHFFLPLANLWGSLVS 488
            + NLD   L   V      IC +S++   A+ GMK VVWNGEH+FLPLANLW +LVS
Sbjct: 937  IHNLDTLTLYNHVFCGQGPICRLSVLAAGAVPGMKMVVWNGEHYFLPLANLWANLVS 993


>emb|CAN77027.1| hypothetical protein VITISV_015338 [Vitis vinifera]
          Length = 1077

 Score = 77.4 bits (189), Expect(2) = 1e-23
 Identities = 41/95 (43%), Positives = 58/95 (61%)
 Frame = +1

Query: 16   QILSACSEELKHGAFIWKQSLEKKVHQQILLLSKSKGQQYILSLXXXXXXXXXXXXSTKL 195
            +++S C++ELK GAFIWKQSL+K VH QIL   + +GQ++IL+L            S +L
Sbjct: 893  RMISVCAQELKQGAFIWKQSLQKNVHNQILY--EPRGQKFILALGEIYRVVKVLGASARL 950

Query: 196  YWPWIVSTLANPAKIIALLEECGAAWLDSKLEEAL 300
            +  W++ + A    I  LLEEC   W  S LE+AL
Sbjct: 951  FKLWVLLSSAK-VDIFVLLEECSTIWSSSGLEDAL 984



 Score = 57.8 bits (138), Expect(2) = 1e-23
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +3

Query: 324  VDNLDVSALQKQVL*EL--ICSISLVLLKAISGMKEVVWNGEHFFLPLANLWGSLVSS 491
            V +LDV  LQ  +  +   IC +SL+  + + GMK V WNG H+FL LANLW +L+SS
Sbjct: 1009 VHDLDVLPLQNHIFAQQKPICQLSLLTPEMVPGMKMVAWNGNHYFLTLANLWANLISS 1066


>ref|XP_002280871.2| PREDICTED: uncharacterized protein LOC100259597 [Vitis vinifera]
            gi|296088316|emb|CBI36761.3| unnamed protein product
            [Vitis vinifera]
          Length = 1074

 Score = 77.4 bits (189), Expect(2) = 1e-23
 Identities = 41/95 (43%), Positives = 58/95 (61%)
 Frame = +1

Query: 16   QILSACSEELKHGAFIWKQSLEKKVHQQILLLSKSKGQQYILSLXXXXXXXXXXXXSTKL 195
            +++S C++ELK GAFIWKQSL+K VH QIL   + +GQ++IL+L            S +L
Sbjct: 890  RMISVCAQELKQGAFIWKQSLQKNVHNQILF--EPQGQKFILALGEIYRVVKVLGASARL 947

Query: 196  YWPWIVSTLANPAKIIALLEECGAAWLDSKLEEAL 300
            +  W++ + A    I  LLEEC   W  S LE+AL
Sbjct: 948  FKLWVLLSSAK-VDIFVLLEECSTIWSSSGLEDAL 981



 Score = 57.8 bits (138), Expect(2) = 1e-23
 Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
 Frame = +3

Query: 324  VDNLDVSALQKQVL*EL--ICSISLVLLKAISGMKEVVWNGEHFFLPLANLWGSLVSS 491
            V +LDV  LQ  +  +   IC +SL+  + + GMK V WNG H+FL LANLW +L+SS
Sbjct: 1006 VHDLDVLPLQNHIFAQQKPICQLSLLTPEMVPGMKMVAWNGNHYFLTLANLWANLISS 1063


>ref|XP_003591102.1| Nucleolar GTPase [Medicago truncatula] gi|355480150|gb|AES61353.1|
            Nucleolar GTPase [Medicago truncatula]
          Length = 899

 Score = 82.4 bits (202), Expect(2) = 1e-22
 Identities = 44/97 (45%), Positives = 58/97 (59%)
 Frame = +1

Query: 16   QILSACSEELKHGAFIWKQSLEKKVHQQILLLSKSKGQQYILSLXXXXXXXXXXXXSTKL 195
            +I   CS+ELKHGA+IWK++++K VH Q  LLS  KG QYI +L            S KL
Sbjct: 721  KIAFVCSQELKHGAYIWKEAVQKNVHDQ--LLSIPKGVQYIHALGEIYRVAEIVGASAKL 778

Query: 196  YWPWIVSTLANPAKIIALLEECGAAWLDSKLEEALLS 306
            + PW++S   +   +  LL EC + WL S LEEAL S
Sbjct: 779  HKPWMLSGSIDCTSLFTLLNECNSLWLASGLEEALSS 815



 Score = 48.9 bits (115), Expect(2) = 1e-22
 Identities = 19/41 (46%), Positives = 28/41 (68%)
 Frame = +3

Query: 369 ELICSISLVLLKAISGMKEVVWNGEHFFLPLANLWGSLVSS 491
           E +C +S +    I G+    WNG+H+F+ LANLWG+L+SS
Sbjct: 855 ETVCQLSALPAGCIPGLNLATWNGKHYFVNLANLWGNLISS 895


>ref|XP_003591103.1| Nucleolar GTPase [Medicago truncatula] gi|355480151|gb|AES61354.1|
           Nucleolar GTPase [Medicago truncatula]
          Length = 893

 Score = 82.4 bits (202), Expect(2) = 1e-22
 Identities = 44/97 (45%), Positives = 58/97 (59%)
 Frame = +1

Query: 16  QILSACSEELKHGAFIWKQSLEKKVHQQILLLSKSKGQQYILSLXXXXXXXXXXXXSTKL 195
           +I   CS+ELKHGA+IWK++++K VH Q  LLS  KG QYI +L            S KL
Sbjct: 715 KIAFVCSQELKHGAYIWKEAVQKNVHDQ--LLSIPKGVQYIHALGEIYRVAEIVGASAKL 772

Query: 196 YWPWIVSTLANPAKIIALLEECGAAWLDSKLEEALLS 306
           + PW++S   +   +  LL EC + WL S LEEAL S
Sbjct: 773 HKPWMLSGSIDCTSLFTLLNECNSLWLASGLEEALSS 809



 Score = 48.9 bits (115), Expect(2) = 1e-22
 Identities = 19/41 (46%), Positives = 28/41 (68%)
 Frame = +3

Query: 369 ELICSISLVLLKAISGMKEVVWNGEHFFLPLANLWGSLVSS 491
           E +C +S +    I G+    WNG+H+F+ LANLWG+L+SS
Sbjct: 849 ETVCQLSALPAGCIPGLNLATWNGKHYFVNLANLWGNLISS 889


Top