BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024679
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ...    60   4e-10
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...    58   5e-10
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi...    53   9e-08
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...    50   4e-07
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]            50   2e-06

>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
          Length = 2301

 Score = 60.5 bits (145), Expect(2) = 4e-10
 Identities = 44/131 (33%), Positives = 66/131 (50%), Gaps = 3/131 (2%)
 Frame = +2

Query: 116 SFVLKNVLLVPHIKQNLLSFARFLIMIIAG-PFNVIHGIIQVSSQ*EKILQEALCTRIYH 292
           + +L +VL+ P I + LLS ++F      G  F+  +  I   +  + +LQ      +Y 
Sbjct: 384 NLILNDVLVCPQIAKPLLSVSKFTTDYPCGFDFDADNVCIYDKATKKVLLQGRNTKGLYS 443

Query: 293 IHSSQLVKVAFQTAYAS--ILASPTLWHQRLDHTTPGIFQRLASSSTLNLYSKTFDSLCT 466
           I        AF   +++  + AS  +WHQRL H  P I QRLAS  ++   +K   SLC 
Sbjct: 444 IKEP-----AFHAFFSTRQVAASDEVWHQRLGHPNPHILQRLASIKSV-FINKRSKSLCV 497

Query: 467 SCQLGKSKSLP 499
           SCQ+ KS  LP
Sbjct: 498 SCQMAKSSRLP 508



 Score = 28.5 bits (62), Expect(2) = 4e-10
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 1   LRDFQEYSGTDQVMVSDSKLLPISLTSSGTYSN 99
           L++ Q Y G+D VMV + + LPI+ T + + ++
Sbjct: 348 LQNAQPYMGSDSVMVGNGEYLPITHTGAASIAS 380


>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score = 58.2 bits (139), Expect(2) = 5e-10
 Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
 Frame = +2

Query: 125 LKNVLLVPHIKQNLLSFARFLIMIIAGPFNVIHGIIQVSSQ*EK--ILQEALCTRIYHIH 298
           L +VL+ P I ++LLS ++ L              ++++ +  K  ++  + C  +Y + 
Sbjct: 388 LTDVLVCPSITKSLLSVSK-LTQDYPCTVEFDSDGVRINDKATKKLLIMGSTCDGLYCLK 446

Query: 299 SSQLVKVAFQTAYASILASPTLWHQRLDHTTPGIFQRLASSSTLNLYSKTFDSLCTSCQL 478
                K  F T   S  AS  +WH+RL H  P + Q+L  ++++++ +KT  SLC +CQL
Sbjct: 447 DDSQFKAFFSTRQQS--ASDEVWHRRLGHPHPQVLQQLVKTNSISI-NKTSKSLCEACQL 503

Query: 479 GKSKSLP 499
           GKS  LP
Sbjct: 504 GKSTRLP 510



 Score = 30.4 bits (67), Expect(2) = 5e-10
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +1

Query: 1   LRDFQEYSGTDQVMVSDSKLLPISLTSS 84
           L+  Q Y G+D VMV+D   LPI+ T S
Sbjct: 349 LQQSQPYHGSDAVMVADGNFLPITHTGS 376


>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1149

 Score = 53.1 bits (126), Expect(2) = 9e-08
 Identities = 37/129 (28%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
 Frame = +2

Query: 125 LKNVLLVPHIKQNLLSFARFLIMIIAGPFNVIHGIIQVSSQ*EKILQEALCTR--IYHIH 298
           LK+VL+ P+I ++LLS ++              G++       K+L +   T   +Y + 
Sbjct: 370 LKDVLVCPNIAKSLLSVSKLTKDYPCSFTFDADGVLVKDKATCKVLTKGSSTSEGLYKLE 429

Query: 299 SSQLVKVAFQTAYAS--ILASPTLWHQRLDHTTPGIFQRLASSSTLNLYSKTFDSLCTSC 472
           + +     FQ  Y++  + A+  +WH RL H  P + Q LA+   + + +K+   +C SC
Sbjct: 430 NPK-----FQMFYSTRQVKATDEVWHMRLGHPNPQVLQLLANKKAIQI-NKSTSKMCESC 483

Query: 473 QLGKSKSLP 499
           +LGKS  LP
Sbjct: 484 RLGKSSRLP 492



 Score = 27.7 bits (60), Expect(2) = 9e-08
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 1   LRDFQEYSGTDQVMVSDSKLLPIS 72
           L+  Q Y G D VM SD   LPI+
Sbjct: 331 LQQMQPYLGNDTVMASDGNFLPIT 354


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
           Arabidopsis thaliana BAC gb|AF080119 and is a member of
           the reverse transcriptase family PF|00078 [Arabidopsis
           thaliana]
          Length = 1415

 Score = 49.7 bits (117), Expect(2) = 4e-07
 Identities = 30/125 (24%), Positives = 56/125 (44%)
 Frame = +2

Query: 125 LKNVLLVPHIKQNLLSFARFLIMIIAGPFNVIHGIIQVSSQ*EKILQEALCTRIYHIHSS 304
           L  VL+VP+I+++LLS ++       G +   + +  +  Q +K++         ++  +
Sbjct: 378 LNEVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYVLEN 437

Query: 305 QLVKVAFQTAYASILASPTLWHQRLDHTTPGIFQRLASSSTLNLYSKTFDSLCTSCQLGK 484
           Q     +     +  A+  +WH RL H      Q L +S  + +       +C  CQ+GK
Sbjct: 438 QEFVALYSNRQCA--ATEEVWHHRLGHANSKALQHLQNSKAIQINKSRTSPVCEPCQMGK 495

Query: 485 SKSLP 499
           S  LP
Sbjct: 496 SSRLP 500



 Score = 28.9 bits (63), Expect(2) = 4e-07
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = +1

Query: 1   LRDFQEYSGTDQVMVSDSKLLPISLTSSGT 90
           L+   EY G D V+V D   LPI+ T S T
Sbjct: 339 LQSATEYEGDDAVLVGDGTYLPITHTGSTT 368


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score = 49.7 bits (117), Expect(2) = 2e-06
 Identities = 30/124 (24%), Positives = 57/124 (45%)
 Frame = +2

Query: 125 LKNVLLVPHIKQNLLSFARFLIMIIAGPFNVIHGIIQVSSQ*EKILQEALCTRIYHIHSS 304
           L  VL+ P I+++LLS ++       G +   + +  +    +K++ +   +   ++  +
Sbjct: 381 LNEVLVCPDIQKSLLSVSKLCDDYPCGVYFDANKVCIIDINTQKVVSKGPRSNGLYVLEN 440

Query: 305 QLVKVAFQTAYASILASPTLWHQRLDHTTPGIFQRLASSSTLNLYSKTFDSLCTSCQLGK 484
           Q     +     +  AS  +WH RL H+   I Q+L SS  ++        +C  CQ+GK
Sbjct: 441 QEFVAFYSNRQCA--ASEEIWHHRLGHSNSRILQQLKSSKEISFNKSRMSPVCEPCQMGK 498

Query: 485 SKSL 496
           S  L
Sbjct: 499 SSKL 502



 Score = 26.9 bits (58), Expect(2) = 2e-06
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 19  YSGTDQVMVSDSKLLPISLTSSGTYSN 99
           Y+G+D V+V D   LPI+   S T S+
Sbjct: 348 YNGSDTVLVGDGAYLPITHVGSTTISS 374