BLASTX nr result

ID: Papaver23_contig00024661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024661
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]                          221   6e-56
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...   214   7e-54
ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog...   214   1e-53
ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog...   213   2e-53
ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog...   212   4e-53

>dbj|BAJ53149.1| JHL23J11.4 [Jatropha curcas]
          Length = 552

 Score =  221 bits (564), Expect = 6e-56
 Identities = 106/128 (82%), Positives = 116/128 (90%)
 Frame = -3

Query: 593 ILGWGGRDDSKVLIPATVILRFMFTPAEMRSDVNLKAELKSDVEEECVKLGPVELVKVCE 414
           ILGWGGRDD+KVLIPATV+LR+MFTPAEMR+D NL++EL+ DV+EECVKLGPV+ VKVCE
Sbjct: 425 ILGWGGRDDAKVLIPATVVLRYMFTPAEMRADENLRSELELDVKEECVKLGPVDSVKVCE 484

Query: 413 NHPQGVVLVRFKDTKDAHKCIELMNGRWFGGRQVHASIDDGSVNHAAVRDLEYDEARLAQ 234
           NHPQGVVLVRFKD KDA KCIELMNGRWFGGRQVHAS DDGSVNHA VRD   D ARL Q
Sbjct: 485 NHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQVHASEDDGSVNHAIVRDYAEDTARLEQ 544

Query: 233 YGAELEAD 210
           +GAELEAD
Sbjct: 545 FGAELEAD 552


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score =  214 bits (546), Expect = 7e-54
 Identities = 101/128 (78%), Positives = 113/128 (88%)
 Frame = -3

Query: 593 ILGWGGRDDSKVLIPATVILRFMFTPAEMRSDVNLKAELKSDVEEECVKLGPVELVKVCE 414
           ILGWGGRDD KV IPATV+LR+MFTPAEMR+D NL++EL+ D+ EECVKLGPV+ VKVCE
Sbjct: 391 ILGWGGRDDVKVSIPATVVLRYMFTPAEMRTDENLRSELEVDIREECVKLGPVDSVKVCE 450

Query: 413 NHPQGVVLVRFKDTKDAHKCIELMNGRWFGGRQVHASIDDGSVNHAAVRDLEYDEARLAQ 234
           NHPQGVVLV+FKD KDA  CIELMNGRWFGGRQVHAS DDGSVNHA VRDL+ D ARL Q
Sbjct: 451 NHPQGVVLVKFKDRKDAQNCIELMNGRWFGGRQVHASEDDGSVNHALVRDLDQDAARLEQ 510

Query: 233 YGAELEAD 210
           +GAELE +
Sbjct: 511 FGAELEGE 518


>ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 503

 Score =  214 bits (544), Expect = 1e-53
 Identities = 100/128 (78%), Positives = 112/128 (87%)
 Frame = -3

Query: 593 ILGWGGRDDSKVLIPATVILRFMFTPAEMRSDVNLKAELKSDVEEECVKLGPVELVKVCE 414
           +LGWGGRDD+KV IPATVILR+MF PAEMR+D NL+ EL+ DV+EEC KLGP++ VK+CE
Sbjct: 376 MLGWGGRDDAKVSIPATVILRYMFAPAEMRADENLRLELEEDVKEECTKLGPLDSVKICE 435

Query: 413 NHPQGVVLVRFKDTKDAHKCIELMNGRWFGGRQVHASIDDGSVNHAAVRDLEYDEARLAQ 234
           NHPQGVVLVRFKD KDA KCIELMNGRWFGGRQ+HAS DDGSVNHA VRDLE D  RL Q
Sbjct: 436 NHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASEDDGSVNHALVRDLEEDAIRLEQ 495

Query: 233 YGAELEAD 210
           +GAELE D
Sbjct: 496 FGAELEGD 503


>ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 500

 Score =  213 bits (543), Expect = 2e-53
 Identities = 101/128 (78%), Positives = 111/128 (86%)
 Frame = -3

Query: 593 ILGWGGRDDSKVLIPATVILRFMFTPAEMRSDVNLKAELKSDVEEECVKLGPVELVKVCE 414
           +LGWGGRDD+KV IPATVILR+MF PAEMR+D NL  EL+ DV+EEC KLGPV+ VK+CE
Sbjct: 373 MLGWGGRDDAKVSIPATVILRYMFAPAEMRADENLHLELEEDVKEECTKLGPVDSVKICE 432

Query: 413 NHPQGVVLVRFKDTKDAHKCIELMNGRWFGGRQVHASIDDGSVNHAAVRDLEYDEARLAQ 234
           NHPQGVVLVRFKD KDA KCIELMNGRWFGGRQ+HAS DDGSVNHA VRDLE D  RL Q
Sbjct: 433 NHPQGVVLVRFKDRKDAQKCIELMNGRWFGGRQIHASEDDGSVNHALVRDLEEDVIRLEQ 492

Query: 233 YGAELEAD 210
           +GAELE D
Sbjct: 493 FGAELEGD 500


>ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 498

 Score =  212 bits (539), Expect = 4e-53
 Identities = 100/128 (78%), Positives = 113/128 (88%)
 Frame = -3

Query: 593 ILGWGGRDDSKVLIPATVILRFMFTPAEMRSDVNLKAELKSDVEEECVKLGPVELVKVCE 414
           ILGWGGRDD+KV IPATVILRFMFTPAEMR+D NL +E+++DV+EE  K GPV+ VKVCE
Sbjct: 371 ILGWGGRDDAKVSIPATVILRFMFTPAEMRADENLASEIETDVKEESTKFGPVDSVKVCE 430

Query: 413 NHPQGVVLVRFKDTKDAHKCIELMNGRWFGGRQVHASIDDGSVNHAAVRDLEYDEARLAQ 234
           NHPQGVVL+RFKD KDA KCIELMNGRWFGG+Q+HAS DDG VNHA VRDLE D ARL Q
Sbjct: 431 NHPQGVVLIRFKDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQ 490

Query: 233 YGAELEAD 210
           +G+ELEAD
Sbjct: 491 FGSELEAD 498


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