BLASTX nr result

ID: Papaver23_contig00024434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024434
         (1617 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD ...   441   e-121
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   423   e-116
ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|2...   405   e-110
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   397   e-108
ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-...   370   e-100

>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  441 bits (1134), Expect = e-121
 Identities = 250/496 (50%), Positives = 321/496 (64%), Gaps = 10/496 (2%)
 Frame = +2

Query: 158  GMNFRLDLKWVSPIQSSIFTNSSTNRQQYPPSVRGKEVSCESARVSLISVSPDESESTLI 337
            GM FRL+LKW  PI     TNS +  +    SV+GKE S +S R S  SV+ ++ ES L 
Sbjct: 2    GMGFRLNLKWDFPISCPTLTNSPS--RLCTSSVQGKEASFDSTRFSFPSVTSEDCES-LY 58

Query: 338  RDSFRVSACSSAAVQIVENSSIERDEMKLKTRKAPGIIMYDPFHSITTSVQDERSILNSS 517
            +D F+  ACSS A+Q  EN     + MK+K  K     ++   ++    + ++ S   + 
Sbjct: 59   KDPFKPFACSSGALQTFENDYSAMEAMKMKIGKCSHGDLFKIVNASQAPIGEDISASVAG 118

Query: 518  FHTNKTSYFGLLVNSLEKVEEIFVDEELIRLEKDIMVQLGRLGALKLFHACLSRNLKXXX 697
               +K S F LL+ +L+ +EE+F D  ++RLE+DIMVQLGRLGALKLF  CLSR LK   
Sbjct: 119  LQASKASQFSLLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTST 178

Query: 698  XXXXXXXXLNMSVPLPVIPEDSPVNGAANDEVGVGDVITVRSGRKEERISKRKRALENAA 877
                       S P   I E    NG  +D +   D + VRSG+KEER SKR+RALE A 
Sbjct: 179  SFDL------FSAPTEHIRE-CQTNGTVDDHL---DKVVVRSGKKEERKSKRERALEKAD 228

Query: 878  KLSYLSPTMKRISKA----------NFSNKRSKRVIVAKNESEMSRGVKEVVNLERIRTM 1027
             +       K I K              N R KR++ AKNE+EMS+GVK V NLERIR  
Sbjct: 229  NIYAFPLPSKTIRKGPGRPSVSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRAT 288

Query: 1028 LEEETGRVASFSSWAEAARIDEKLLKERLHFGWYCRDKLLKSTRSLVMFLARNYRGVGIS 1207
            LEEE G VAS S+WAEAA +D+K+L+++L FGWYCRD+LL+ST SLV+++ARNYRG+G++
Sbjct: 289  LEEEIGHVASLSNWAEAAGVDKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVA 348

Query: 1208 LEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQYWIRKSMSAYVAQNSRGIQLPATLARAI 1387
             ED+LQAG  GVL GAER+DHT+GYRFSTYVQYWIRKSMS  VA+++RG+++P TL RAI
Sbjct: 349  FEDILQAGNLGVLQGAERFDHTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAI 408

Query: 1388 YQIQQARKTLNSLYGRYPDDNEIATFTGLSLTKIRLASKCPRVVGSIDQKLGDDINIKFM 1567
             QIQ+ARK L   +GRYPDDNEIA FTGLSL KIR A  C RVVGS DQ   D      +
Sbjct: 409  GQIQKARKALYKSHGRYPDDNEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATIL 468

Query: 1568 EITPDRSVETPDEVVM 1615
            E TPD S+++P+E  M
Sbjct: 469  EFTPDTSIKSPEEGFM 484


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  423 bits (1087), Expect = e-116
 Identities = 236/466 (50%), Positives = 305/466 (65%), Gaps = 10/466 (2%)
 Frame = +2

Query: 248  PSVRGKEVSCESARVSLISVSPDESESTLIRDSFRVSACSSAAVQIVENSSIERDEMKLK 427
            P ++GKE S +S R S  SV+ ++ ES L +D F+  ACSS A+Q  EN     + MK+K
Sbjct: 80   PYIQGKEASFDSTRFSFPSVTSEDCES-LYKDPFKPFACSSGALQTFENDYSAMEAMKMK 138

Query: 428  TRKAPGIIMYDPFHSITTSVQDERSILNSSFHTNKTSYFGLLVNSLEKVEEIFVDEELIR 607
              K     ++   ++    + ++ S   +    +K S F LL+ +L+ +EE+F D  ++R
Sbjct: 139  IGKCSHGDLFKIVNASQAPIGEDISASVAGLQASKASQFSLLLENLDILEEMFADSNMVR 198

Query: 608  LEKDIMVQLGRLGALKLFHACLSRNLKXXXXXXXXXXXLNMSVPLPVIPEDSPVNGAAND 787
            LE+DIMVQLGRLGALKLF  CLSR LK              S P   I E    NG  +D
Sbjct: 199  LERDIMVQLGRLGALKLFQICLSRTLKTSTSFDL------FSAPTEHIRE-CQTNGTVDD 251

Query: 788  EVGVGDVITVRSGRKEERISKRKRALENAAKLSYLSPTMKRISKA----------NFSNK 937
             +   D + VRSG+KEER SKR+RALE A  +       K I K              N 
Sbjct: 252  HL---DKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPSVSTVKRTLNS 308

Query: 938  RSKRVIVAKNESEMSRGVKEVVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLH 1117
            R KR++ AKNE+EMS+GVK V NLERIR  LEEE G VAS S+WAEAA +D+K+L+++L 
Sbjct: 309  RRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGVDKKVLQQQLQ 368

Query: 1118 FGWYCRDKLLKSTRSLVMFLARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTY 1297
            FGWYCRD+LL+ST SLV+++ARNYRG+G++ ED+LQAG  GVL GAER+DHT+GYRFSTY
Sbjct: 369  FGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFDHTKGYRFSTY 428

Query: 1298 VQYWIRKSMSAYVAQNSRGIQLPATLARAIYQIQQARKTLNSLYGRYPDDNEIATFTGLS 1477
            VQYWIRKSMS  VA+++RG+++P TL RAI QIQ+ARK L   +GRYPDDNEIA FTGLS
Sbjct: 429  VQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDDNEIAKFTGLS 488

Query: 1478 LTKIRLASKCPRVVGSIDQKLGDDINIKFMEITPDRSVETPDEVVM 1615
            L KIR A  C RVVGS DQ   D      +E TPD S+++P+E  M
Sbjct: 489  LAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFM 534


>ref|XP_002308586.1| predicted protein [Populus trichocarpa] gi|222854562|gb|EEE92109.1|
            predicted protein [Populus trichocarpa]
          Length = 559

 Score =  405 bits (1040), Expect = e-110
 Identities = 228/495 (46%), Positives = 326/495 (65%), Gaps = 9/495 (1%)
 Frame = +2

Query: 158  GMNFRLDLKWVSPIQSSIFTNSSTNRQQYPPSVRGKEVSCESARVSLISVSPDESESTLI 337
            G+ FRL  KW SP+QS   TNS++    +  S RG E S   AR+S +SV  +E +  L 
Sbjct: 2    GVGFRLTPKWGSPMQSHSATNSTSMFSSF--SARGMEASVNQARLSFLSVVSEEGD-ILN 58

Query: 338  RDSFRVSACSSAAVQIVENSSIERDEMKLKTRKAPGIIMYDPFHSITTSVQDERSILNSS 517
            + SF+  ACSSAA Q VEN  ++ + +K+   K   + + +   +   SV++E S  ++ 
Sbjct: 59   KHSFKSFACSSAA-QNVENDCLQMERLKMNVDKTSHVSINNMMGNDKVSVEEEISTSHTR 117

Query: 518  FHTNKTSYFGLLVNSLEKVEEIFVDEELIRLEKDIMVQLGRLGALKLFHACLSRNLKXXX 697
                 TS    L+++L+ +E++  D + ++LE+DI++QLGRLGAL+ F+ACLSR L+   
Sbjct: 118  LRERMTSRISFLLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSN 177

Query: 698  XXXXXXXXLNMSVPLPVIPEDSPVNGAANDEVGVGDVITVRSGRKEERISKRKRAL-ENA 874
                    L++S        +S  +G   D  G      VR+G+KEER  +R+RA  +N 
Sbjct: 178  V-------LDLSAVPTENTGESKTDGMLGDLTGK---TVVRTGKKEERKFRRERAASDNG 227

Query: 875  AKLSYLSPTMKRIS----KANF----SNKRSKRVIVAKNESEMSRGVKEVVNLERIRTML 1030
             K + LS   K +     K  F    S+  S+R ++A+NE++M+RGVK   +LERIRT L
Sbjct: 228  KKTTSLSLPSKTVQNNLPKPTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTL 287

Query: 1031 EEETGRVASFSSWAEAARIDEKLLKERLHFGWYCRDKLLKSTRSLVMFLARNYRGVGISL 1210
            EEETG+V S S WAEA  +D+K+L+++L FGWYCRD+L+K+T SLV+++ARNYRG+GI++
Sbjct: 288  EEETGQVVSLSCWAEATGLDKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAM 347

Query: 1211 EDLLQAGYRGVLLGAERYDHTRGYRFSTYVQYWIRKSMSAYVAQNSRGIQLPATLARAIY 1390
            EDL+QAG  G+L GAER+D TRGYRFSTYVQYWIRKSM   V +++RGIQ+P  L+R+I 
Sbjct: 348  EDLIQAGNLGLLQGAERFDPTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSIN 407

Query: 1391 QIQQARKTLNSLYGRYPDDNEIATFTGLSLTKIRLASKCPRVVGSIDQKLGDDINIKFME 1570
            +IQ+ARK L++ +GRYPDD E+A FTGLSL KI  A KC RVV S+DQK+G+    K+ E
Sbjct: 408  KIQKARKALSNSHGRYPDDWEVAKFTGLSLAKIESAQKCLRVVASLDQKIGEGHYAKYSE 467

Query: 1571 ITPDRSVETPDEVVM 1615
              PD S++ P+E VM
Sbjct: 468  FIPDMSIQNPEEAVM 482


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  397 bits (1020), Expect = e-108
 Identities = 237/506 (46%), Positives = 327/506 (64%), Gaps = 20/506 (3%)
 Frame = +2

Query: 158  GMNFRLDLKWVSPIQSSIFTNSSTNRQQYPPS--VRGKEVSCESARVSLISVSPDESEST 331
            G  FRL+LK   P  S    NS +     P S  VRG+E +   +R+S +SV  +E +  
Sbjct: 2    GFGFRLNLKLDFPFHSP---NSPSRLSSSPSSSFVRGREATSYQSRLSFLSVISEEGDIA 58

Query: 332  LIRDSFRVSACSSAAVQIVENSSIERDEMKLKTRKAPGI---IMYDPFHSITTSVQDERS 502
              RD  +  A S A VQ VEN   + +  K+   K       I+ D   S+   +     
Sbjct: 59   H-RDPLKTYAYSYA-VQTVENEHSQGEGFKVNFGKRSHFGLNIIGDAEVSLKEDI----- 111

Query: 503  ILNSSFHTNKTSYFGLLVNSLEKVEEIFVDEELIRLEKDIMVQLGRLGALKLFHACLSRN 682
             ++ S    +TS F LL+ +L  +E+ F D +  +LE+DI++QLG+LGALKLF+ CL+R 
Sbjct: 112  FVSPSSTKERTSRFSLLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRT 171

Query: 683  LKXXXXXXXXXXXLNMSVPLPVIPEDSPVNGAA-NDEVGVGDVITVRSGRKEERISKRKR 859
            L+           L +S     I  +  +NG + N+++ V     V + +KEER S+R+R
Sbjct: 172  LETTNV-------LEVSDVHTEIIGECNINGTSINNQIKV----VVHTAKKEERKSRRER 220

Query: 860  ALENAAKLSYLSPTMKRISKA--------------NFSNKRSKRVIVAKNESEMSRGVKE 997
            A   +A+  + SP++   S+                 S  +S+R+I+A+NE+EM+RG+K 
Sbjct: 221  A---SARKGHKSPSLPLPSRPIQSGSEKPTVSSGKKASKSKSRRLIIARNEAEMARGIKV 277

Query: 998  VVNLERIRTMLEEETGRVASFSSWAEAARIDEKLLKERLHFGWYCRDKLLKSTRSLVMFL 1177
            + +LE+IRT LEEET RV S S WAEAA +D K+L+++L FGWYCRD+L+KSTRSLV++ 
Sbjct: 278  LADLEKIRTTLEEETERVVSLSCWAEAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYF 337

Query: 1178 ARNYRGVGISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQYWIRKSMSAYVAQNSRGI 1357
            ARNYRG GI+LEDLLQAG  GVL GAER+DHTRGYRFSTYVQYWIRKSMS  V++ +RGI
Sbjct: 338  ARNYRGTGIALEDLLQAGNLGVLEGAERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGI 397

Query: 1358 QLPATLARAIYQIQQARKTLNSLYGRYPDDNEIATFTGLSLTKIRLASKCPRVVGSIDQK 1537
            Q+P TL+RAIYQIQ+ARK L +  G+YPDD+EIA +TGLSL KI  AS+C RVVGSIDQK
Sbjct: 398  QIPCTLSRAIYQIQKARKALTTSNGKYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQK 457

Query: 1538 LGDDINIKFMEITPDRSVETPDEVVM 1615
            +G+ +N K++E  PD SV++P+EVVM
Sbjct: 458  IGESLNAKYLEFLPDTSVQSPEEVVM 483


>ref|XP_004148429.1| PREDICTED: RNA polymerase sigma factor sigC-like [Cucumis sativus]
            gi|449507267|ref|XP_004162982.1| PREDICTED: RNA
            polymerase sigma factor sigC-like [Cucumis sativus]
          Length = 559

 Score =  370 bits (950), Expect = e-100
 Identities = 222/497 (44%), Positives = 314/497 (63%), Gaps = 12/497 (2%)
 Frame = +2

Query: 158  GMNFRLDLKWVSPIQSSIFTNSSTNRQQYPPSVRGKEVSCESARVSLISVSPDESESTLI 337
            G +FR +L+W   IQ+    NS +     P + +G+E +  S R+S  S   +E ES + 
Sbjct: 2    GTSFRPNLRWGFQIQTHSLKNSPSKLS--PHASKGREAAFNSGRLSFFSSICEEGES-IP 58

Query: 338  RDSFRVSACSSAAVQIVENSSIERDEMKLKT-RKAPGIIMYDPFHSITTSVQDERSILNS 514
            R++ +   C S A Q   N  +  +E+++ +  K+ G + Y    +  + V+D  S   +
Sbjct: 59   RETLKTYTCLSEAPQTSANDLLNLEEIEMNSGAKSLGPMHYGIKSTRPSKVEDNFSSC-T 117

Query: 515  SFHTNKTSYFGLLVNSLEKVEEIFVDEELIRLEKDIMVQLGRLGALKLFHACLSRNLKXX 694
            S  T K S FG+L+ +L+ +EE F +  ++ LE+DI++QL +LGAL+ F+ CLSR LK  
Sbjct: 118  SLPTGKASPFGILMENLDVLEETFTESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTS 177

Query: 695  XXXXXXXXXLNMSVPLPVIP-EDSPVNGAANDEVGVGDVITVRSGRKEERISKRKRALEN 871
                      + S  LP+   ED  VN   ND+    D +TV S +K  R S +KRA++N
Sbjct: 178  S--------FHDSSGLPIEGGEDHNVNQKTNDQ---NDNVTVYSAKKAGRRSVKKRAMDN 226

Query: 872  AAKLSYLSPTMKRI----------SKANFSNKRSKRVIVAKNESEMSRGVKEVVNLERIR 1021
            A K++    T + +          S+   SN   +R+IVA NE+EMS GVK V NLERIR
Sbjct: 227  ADKIASRLLTTRAVKEKIHRSTVFSRKKSSNSSKRRLIVAINEAEMSTGVKVVANLERIR 286

Query: 1022 TMLEEETGRVASFSSWAEAARIDEKLLKERLHFGWYCRDKLLKSTRSLVMFLARNYRGVG 1201
              LE+E+GR+AS S WAEAA +D K L+++L FG +CRD+LL+ST SLV+FLA+ YR  G
Sbjct: 287  ETLEKESGRIASMSCWAEAASVDIKDLQKQLQFGSFCRDELLRSTNSLVVFLAKKYRCSG 346

Query: 1202 ISLEDLLQAGYRGVLLGAERYDHTRGYRFSTYVQYWIRKSMSAYVAQNSRGIQLPATLAR 1381
            + +EDL+QAG  GVL G ER+D  RG+R STY+QYWIRKSMS  VA+NSRGIQ+P +L +
Sbjct: 347  LPMEDLVQAGALGVLQGVERFDPKRGFRISTYIQYWIRKSMSRVVARNSRGIQIPRSLTK 406

Query: 1382 AIYQIQQARKTLNSLYGRYPDDNEIATFTGLSLTKIRLASKCPRVVGSIDQKLGDDINIK 1561
            AI QIQ+ARK LN    RY DD +IA  TGL L K+R+AS C +VVGS DQK+GD +N+K
Sbjct: 407  AINQIQKARKVLNHSGRRYSDD-DIARATGLPLAKVRVASNCLKVVGSNDQKMGDGVNMK 465

Query: 1562 FMEITPDRSVETPDEVV 1612
            +ME T D S+++P+E V
Sbjct: 466  YMEFTADMSIQSPEETV 482


Top