BLASTX nr result

ID: Papaver23_contig00024407 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024407
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    86   2e-14
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    84   8e-14
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia...    84   1e-13
ref|XP_002522646.1| RNA binding protein, putative [Ricinus commu...    80   1e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    80   2e-12

>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
 Frame = -1

Query: 996  PRVKTFLWKCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSIP 817
            P+VKTFLW+   + +P+  R+          C++C    E + H+ + C  SR  W  + 
Sbjct: 1427 PKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLG 1486

Query: 816  GARRIMEDVDTMVYDWITSWFSNDFINLDED*IIKMANASWEIWKERCRCVFDGNKPNPM 637
               ++ +     +   +T +       LD    +  A   W IWK+R  C++     N +
Sbjct: 1487 LWSKVQQKAQLNLSFGVTMF--EILQELDSSQRVIWACVMWSIWKQRNDCIWR----NEV 1540

Query: 636  *TIRSIQY--LNQTTGSGMKRTQQQSYHNSLNNNSRKIWIPPISFAYSICCDAAFKSVIN 463
             T  +++   LN  TG                 N++ IW  P    +    DAAF     
Sbjct: 1541 MTTAAVRDRGLNLLTGW---------------QNAQDIWRKPDEGHFKCNVDAAFFK--E 1583

Query: 462  VNHTGIGLILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELNIYQVCFELDA 283
             N  GIG+ + + +G   + R  +    LD    E  GL  A+ WA+E N+  + FELD+
Sbjct: 1584 SNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNITFELDS 1643

Query: 282  QTIVAAAKEDYQKVRWESQSLAMEVINIFSKHPLWS-CEFISRKINKPADKLAKHSRLFQ 106
            + +V +       V  +  ++  E    FS     S  EFI R+ N+    LA+ +  F 
Sbjct: 1644 KRVVYSFHNTRNDVS-DLGAIIRECRTTFSSFFTNSRVEFIRRQANEVVHSLAR-AATFY 1701

Query: 105  ISRSWIQNPPNFIVDALYADTR 40
             S  +    P+ I D L  + R
Sbjct: 1702 ASIHYFTVLPDCIQDVLINEMR 1723


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 84.0 bits (206), Expect = 8e-14
 Identities = 88/387 (22%), Positives = 161/387 (41%), Gaps = 13/387 (3%)
 Frame = -1

Query: 1146 DRLIWSLTRNGQFTVKSACKKLVDIKTNAADVHDANQAXXXXXXXXXNTLPRVKTFLWKC 967
            D   W+  +NG F+VKSA   +     N  +     +              + K  +W  
Sbjct: 1004 DDFTWNFEKNGTFSVKSAYYLI-----NRREEETGGKGSWRGLWRKNIPF-KYKLLIWNG 1057

Query: 966  MNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSI-----PGARRI 802
            +++I+P++  + + +  F   C  C+  +E   H+  +C  + +VW+ I     P  + +
Sbjct: 1058 IHNILPTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVWIEILKHHKPNNQNL 1117

Query: 801  MEDVDTMVYDWITSWFSNDF-INLDED*IIKMANASWEIWKERCRCVFDGNKPNPM*TIR 625
              +++    +WI      DF +N  +  + K   A W IW  R + VF+    +P  T  
Sbjct: 1118 FFNLEW--EEWI------DFNLNQHDYWVTKFTTAFWHIWCSRNKTVFECAVNHPKFT-- 1167

Query: 624  SIQYLNQTTGSGMKRTQQQSYHNSLNNNSRKI--WIPPISFAYSICCDAAFKSVINVNHT 451
                 N+         +    +N+  N S+ +  W PP      +  D A+K+  +  + 
Sbjct: 1168 ----YNRVVADFFTNIRAFQVNNTQGNGSKVVLRWKPPHQGFLKLNTDGAWKA--DWENA 1221

Query: 450  GIGLILCNATGEFKQGRCIYERGYLDA---EHAELEGLRRAMLWAEELNIYQVCFELDAQ 280
            GIG +  +A G ++ G        +DA   E AEL  +R  +  A + N +++  E DA+
Sbjct: 1222 GIGGVFRDAVGNWELGFA----KRVDAGSPEAAELMAIREGLQVAWDCNYHKLEVECDAK 1277

Query: 279  TIVAAAKEDYQKVRWESQSLAMEVINIFSKHPLWSCEF--ISRKINKPADKLAKHSRLFQ 106
             +V    +  +        + M++  + ++H  WS EF  I R+ NK A  LA  +    
Sbjct: 1278 GVVQLLAKPLEAENHPLGVIVMDICILLTRH--WSVEFLHIKREGNKVAHCLAAEAVNQV 1335

Query: 105  ISRSWIQNPPNFIVDALYADTRGVTNS 25
              R    NPP    +  + D   V +S
Sbjct: 1336 EERVIFINPPEHAKEVYFKDKEFVASS 1362


>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
            gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
            thaliana] gi|7269807|emb|CAB79667.1| putative protein
            [Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
            putative reverse transcriptase/RNA-dependent DNA
            polymerase [Arabidopsis thaliana]
            gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
            [Arabidopsis thaliana]
          Length = 575

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 86/381 (22%), Positives = 148/381 (38%), Gaps = 26/381 (6%)
 Frame = -1

Query: 1146 DRLIWSLTRNGQFTVKSA---CKKLVDIKTNAADVHDANQAXXXXXXXXXNTLPRVKTFL 976
            D   W  T +G +TVKS      ++++ +++  +V + +            T P+++ FL
Sbjct: 211  DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFL 270

Query: 975  WKCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSIPGARRIME 796
            WKC+++ +P +  +          C  C    ET  H+L++C F+R  W           
Sbjct: 271  WKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWA---------- 320

Query: 795  DVDTMVYDWITSWFSNDFINLDED*IIKMANASWE------------IWKERCRCVFDGN 652
             + ++       W  + ++NL     +   N  WE            +WK R   VF G 
Sbjct: 321  -ISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGR 379

Query: 651  KPNPM*TIRSIQYLNQTTGSGMKRTQQQSYHN--SLNNNSRKIWIPPISFAYSICCDAAF 478
            + N    +R  +           RT+ +S      +N +S   W PP         DA +
Sbjct: 380  EFNAQEVLRRAE---DDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATW 436

Query: 477  KSVINVNHTGIGLILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELNIYQVC 298
                +    GIG +L N  GE K               AELE +R A+L         V 
Sbjct: 437  NR--DNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVI 494

Query: 297  FELDAQTIVAAAKEDYQKVRWES-QSLAMEVINIFSKHPLWSCEFISRKINKPADKLAKH 121
            FE D+Q ++     D     W S +    ++  + S+       FI R+ N  A+++A+ 
Sbjct: 495  FESDSQVLIEILNND---EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARE 551

Query: 120  S--------RLFQISRSWIQN 82
            S        +L+ I  SW ++
Sbjct: 552  SLSFLNYDPKLYSIVPSWARS 572


>ref|XP_002522646.1| RNA binding protein, putative [Ricinus communis]
            gi|223538122|gb|EEF39733.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 421

 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 85/379 (22%), Positives = 156/379 (41%), Gaps = 7/379 (1%)
 Frame = -1

Query: 1191 EISIILNMRIP-AYSTDRLIWSLTRNGQFTVKSACKKLVDIKTNAADVHDANQAXXXXXX 1015
            E   IL++R+      D ++W  T++G++ V+S      ++K    D H AN +      
Sbjct: 43   EAEQILSIRLSLCRQHDIIVWHYTKDGKYNVRSGYHFAKELKIQ--DQHTANGSGAPIES 100

Query: 1014 XXXNTL------PRVKTFLWKCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWE 853
                +       P+V   LW+     +P    + R        C  C Q VET  H++W+
Sbjct: 101  LFWKSFWKVKVPPKVCNLLWQLEKAALPVKANLIRRGVDIQLPCLQC-QNVETVEHLIWD 159

Query: 852  CHFSRAVWMSIPGARRIMEDVDTMVYDWITSWFSNDFINLDED*IIKMANASWEIWKERC 673
               SR +W  +  +    ED D  ++ W+   F    + L+   + +     W IW  R 
Sbjct: 160  YFLSRKIWGKVDMSALCDED-DLDIFAWLQHCFK---VLLNSS-LAQFMITVWGIWYARN 214

Query: 672  RCVFDGNKPNPM*TIRSIQYLNQTTGSGMKRTQQQSYHNSLNNNSRKIWIPPISFAYSIC 493
            +  F+    N   ++  I    +       +       +++ + S+  W  P      + 
Sbjct: 215  QLCFE----NKSLSVDDIVQPTKLMLLYYVKANDVPVRDNIRSRSQSFWRAPHVGRCKLN 270

Query: 492  CDAAFKSVINVNHTGIGLILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELN 313
             DAA+++ I     G   I+ +  G      C ++  + D E  E + L   + +A +L+
Sbjct: 271  VDAAYRNNIG---AGFRAIIRDWNGGIVGSACSFKPYFNDPEIVEFQDLSFGLTFALDLS 327

Query: 312  IYQVCFELDAQTIVAAAKEDYQKVRWESQSLAMEVINIFSKHPLWSCEFISRKINKPADK 133
            I  +  E+D  ++V  A    Q +   S  LA++V  +FS     +  +I R+IN  A  
Sbjct: 328  ITHLDVEVDCASVVQLATSPSQ-ISSYSSLLAVDVRQLFSCFVSSTITWIPREINVVAQA 386

Query: 132  LAKHSRLFQISRSWIQNPP 76
            LA +S     +  +I+N P
Sbjct: 387  LASYSFYDSFTYFFIENIP 405


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 86/376 (22%), Positives = 146/376 (38%), Gaps = 9/376 (2%)
 Frame = -1

Query: 1146 DRLIWSLTRNGQFTVKSAC--KKLVDIKTNAADVHDANQAXXXXXXXXXNTLPRVKTFLW 973
            D+ +W +++NGQFTV+SA   + L D KT  +     N              P+VK F W
Sbjct: 1010 DQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIP-PKVKLFSW 1068

Query: 972  KCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSIPGARRIMED 793
            K +++ +     M +        C  C +  ETT H++W C  S   W   P  R    +
Sbjct: 1069 KAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISP-LRIHTGN 1127

Query: 792  VDTMVYD-WITSWFSNDFINLDED*IIKMANASWEIWKERCRCVFDGNKPNPM*TIRSIQ 616
            ++   +  W+ S       + D +         W IW  R + VF+  K        + Q
Sbjct: 1128 IEAGSFRIWVESLLDT---HKDTEWWALFWMICWNIWLGRNKWVFEKKK-------LAFQ 1177

Query: 615  YLNQTTGSGMKRTQQQSYHNS----LNNNSRKIWIPPISFAYSICCDAAFKSVINVNHTG 448
             + +    G+   +++  H S    LN +     +PP+         A FK      H G
Sbjct: 1178 EVVERAVRGVMEFEEECAHTSPVETLNTHENGWSVPPVGMVKLNVDAAVFK------HVG 1231

Query: 447  IGL--ILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELNIYQVCFELDAQTI 274
            IG+  ++ +A G+     C       D   AE   LR  +  A E     +  E+D + +
Sbjct: 1232 IGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRNLVVEMDCKKL 1291

Query: 273  VAAAKEDYQKVRWESQSLAMEVINIFSKHPLWSCEFISRKINKPADKLAKHSRLFQISRS 94
                +     V      +  +++ + SK      E + R  NK A  LA+  +     R 
Sbjct: 1292 FLQLRGKASDVT-PFGRVVDDILYLASKCSNVVFEHVKRHCNKVAHLLAQMCKNAMEKRV 1350

Query: 93   WIQNPPNFIVDALYAD 46
            W++  P+ +  A+  D
Sbjct: 1351 WLEEYPSEVSSAVLLD 1366


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