BLASTX nr result
ID: Papaver23_contig00024407
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00024407
(1341 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub... 86 2e-14
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga... 84 8e-14
ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thalia... 84 1e-13
ref|XP_002522646.1| RNA binding protein, putative [Ricinus commu... 80 1e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga... 80 2e-12
>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
truncatula] gi|355513943|gb|AES95566.1| Replication
protein A 70 kDa DNA-binding subunit [Medicago
truncatula]
Length = 1723
Score = 85.9 bits (211), Expect = 2e-14
Identities = 81/322 (25%), Positives = 134/322 (41%), Gaps = 3/322 (0%)
Frame = -1
Query: 996 PRVKTFLWKCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSIP 817
P+VKTFLW+ + +P+ R+ C++C E + H+ + C SR W +
Sbjct: 1427 PKVKTFLWRSCRNALPTRVRLQDRGVNCTKTCALCENEDEDSMHLFFYCTKSRQCWQQLG 1486
Query: 816 GARRIMEDVDTMVYDWITSWFSNDFINLDED*IIKMANASWEIWKERCRCVFDGNKPNPM 637
++ + + +T + LD + A W IWK+R C++ N +
Sbjct: 1487 LWSKVQQKAQLNLSFGVTMF--EILQELDSSQRVIWACVMWSIWKQRNDCIWR----NEV 1540
Query: 636 *TIRSIQY--LNQTTGSGMKRTQQQSYHNSLNNNSRKIWIPPISFAYSICCDAAFKSVIN 463
T +++ LN TG N++ IW P + DAAF
Sbjct: 1541 MTTAAVRDRGLNLLTGW---------------QNAQDIWRKPDEGHFKCNVDAAFFK--E 1583
Query: 462 VNHTGIGLILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELNIYQVCFELDA 283
N GIG+ + + +G + R + LD E GL A+ WA+E N+ + FELD+
Sbjct: 1584 SNRVGIGICIRDDSGRLVKARTSWSTLLLDVPEGEAIGLLYAIRWAKEQNLNNITFELDS 1643
Query: 282 QTIVAAAKEDYQKVRWESQSLAMEVINIFSKHPLWS-CEFISRKINKPADKLAKHSRLFQ 106
+ +V + V + ++ E FS S EFI R+ N+ LA+ + F
Sbjct: 1644 KRVVYSFHNTRNDVS-DLGAIIRECRTTFSSFFTNSRVEFIRRQANEVVHSLAR-AATFY 1701
Query: 105 ISRSWIQNPPNFIVDALYADTR 40
S + P+ I D L + R
Sbjct: 1702 ASIHYFTVLPDCIQDVLINEMR 1723
>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1363
Score = 84.0 bits (206), Expect = 8e-14
Identities = 88/387 (22%), Positives = 161/387 (41%), Gaps = 13/387 (3%)
Frame = -1
Query: 1146 DRLIWSLTRNGQFTVKSACKKLVDIKTNAADVHDANQAXXXXXXXXXNTLPRVKTFLWKC 967
D W+ +NG F+VKSA + N + + + K +W
Sbjct: 1004 DDFTWNFEKNGTFSVKSAYYLI-----NRREEETGGKGSWRGLWRKNIPF-KYKLLIWNG 1057
Query: 966 MNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSI-----PGARRI 802
+++I+P++ + + + F C C+ +E H+ +C + +VW+ I P + +
Sbjct: 1058 IHNILPTALFLAKRIHNFNPQCVACDHPIEDMIHLFRDCCVASSVWIEILKHHKPNNQNL 1117
Query: 801 MEDVDTMVYDWITSWFSNDF-INLDED*IIKMANASWEIWKERCRCVFDGNKPNPM*TIR 625
+++ +WI DF +N + + K A W IW R + VF+ +P T
Sbjct: 1118 FFNLEW--EEWI------DFNLNQHDYWVTKFTTAFWHIWCSRNKTVFECAVNHPKFT-- 1167
Query: 624 SIQYLNQTTGSGMKRTQQQSYHNSLNNNSRKI--WIPPISFAYSICCDAAFKSVINVNHT 451
N+ + +N+ N S+ + W PP + D A+K+ + +
Sbjct: 1168 ----YNRVVADFFTNIRAFQVNNTQGNGSKVVLRWKPPHQGFLKLNTDGAWKA--DWENA 1221
Query: 450 GIGLILCNATGEFKQGRCIYERGYLDA---EHAELEGLRRAMLWAEELNIYQVCFELDAQ 280
GIG + +A G ++ G +DA E AEL +R + A + N +++ E DA+
Sbjct: 1222 GIGGVFRDAVGNWELGFA----KRVDAGSPEAAELMAIREGLQVAWDCNYHKLEVECDAK 1277
Query: 279 TIVAAAKEDYQKVRWESQSLAMEVINIFSKHPLWSCEF--ISRKINKPADKLAKHSRLFQ 106
+V + + + M++ + ++H WS EF I R+ NK A LA +
Sbjct: 1278 GVVQLLAKPLEAENHPLGVIVMDICILLTRH--WSVEFLHIKREGNKVAHCLAAEAVNQV 1335
Query: 105 ISRSWIQNPPNFIVDALYADTRGVTNS 25
R NPP + + D V +S
Sbjct: 1336 EERVIFINPPEHAKEVYFKDKEFVASS 1362
>ref|NP_194638.1| Ribonuclease H-like protein [Arabidopsis thaliana]
gi|4972055|emb|CAB43923.1| putative protein [Arabidopsis
thaliana] gi|7269807|emb|CAB79667.1| putative protein
[Arabidopsis thaliana] gi|67633766|gb|AAY78807.1|
putative reverse transcriptase/RNA-dependent DNA
polymerase [Arabidopsis thaliana]
gi|332660185|gb|AEE85585.1| Ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 575
Score = 83.6 bits (205), Expect = 1e-13
Identities = 86/381 (22%), Positives = 148/381 (38%), Gaps = 26/381 (6%)
Frame = -1
Query: 1146 DRLIWSLTRNGQFTVKSA---CKKLVDIKTNAADVHDANQAXXXXXXXXXNTLPRVKTFL 976
D W T +G +TVKS ++++ +++ +V + + T P+++ FL
Sbjct: 211 DSYTWDYTSSGDYTVKSGYWVLTQIINKRSSPQEVSEPSLNPIYQKIWKSQTSPKIQHFL 270
Query: 975 WKCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSIPGARRIME 796
WKC+++ +P + + C C ET H+L++C F+R W
Sbjct: 271 WKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWA---------- 320
Query: 795 DVDTMVYDWITSWFSNDFINLDED*IIKMANASWE------------IWKERCRCVFDGN 652
+ ++ W + ++NL + N WE +WK R VF G
Sbjct: 321 -ISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWEKASQLVPWLLWRLWKNRNELVFRGR 379
Query: 651 KPNPM*TIRSIQYLNQTTGSGMKRTQQQSYHN--SLNNNSRKIWIPPISFAYSICCDAAF 478
+ N +R + RT+ +S +N +S W PP DA +
Sbjct: 380 EFNAQEVLRRAE---DDLEEWRIRTEAESCGTKPQVNRSSCGRWRPPPHQWVKCNTDATW 436
Query: 477 KSVINVNHTGIGLILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELNIYQVC 298
+ GIG +L N GE K AELE +R A+L V
Sbjct: 437 NR--DNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMRWAVLSLSRFQYNYVI 494
Query: 297 FELDAQTIVAAAKEDYQKVRWES-QSLAMEVINIFSKHPLWSCEFISRKINKPADKLAKH 121
FE D+Q ++ D W S + ++ + S+ FI R+ N A+++A+
Sbjct: 495 FESDSQVLIEILNND---EIWPSLKPTIQDLQRLLSQFTEVKFVFIPREGNTLAERVARE 551
Query: 120 S--------RLFQISRSWIQN 82
S +L+ I SW ++
Sbjct: 552 SLSFLNYDPKLYSIVPSWARS 572
>ref|XP_002522646.1| RNA binding protein, putative [Ricinus communis]
gi|223538122|gb|EEF39733.1| RNA binding protein, putative
[Ricinus communis]
Length = 421
Score = 80.1 bits (196), Expect = 1e-12
Identities = 85/379 (22%), Positives = 156/379 (41%), Gaps = 7/379 (1%)
Frame = -1
Query: 1191 EISIILNMRIP-AYSTDRLIWSLTRNGQFTVKSACKKLVDIKTNAADVHDANQAXXXXXX 1015
E IL++R+ D ++W T++G++ V+S ++K D H AN +
Sbjct: 43 EAEQILSIRLSLCRQHDIIVWHYTKDGKYNVRSGYHFAKELKIQ--DQHTANGSGAPIES 100
Query: 1014 XXXNTL------PRVKTFLWKCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWE 853
+ P+V LW+ +P + R C C Q VET H++W+
Sbjct: 101 LFWKSFWKVKVPPKVCNLLWQLEKAALPVKANLIRRGVDIQLPCLQC-QNVETVEHLIWD 159
Query: 852 CHFSRAVWMSIPGARRIMEDVDTMVYDWITSWFSNDFINLDED*IIKMANASWEIWKERC 673
SR +W + + ED D ++ W+ F + L+ + + W IW R
Sbjct: 160 YFLSRKIWGKVDMSALCDED-DLDIFAWLQHCFK---VLLNSS-LAQFMITVWGIWYARN 214
Query: 672 RCVFDGNKPNPM*TIRSIQYLNQTTGSGMKRTQQQSYHNSLNNNSRKIWIPPISFAYSIC 493
+ F+ N ++ I + + +++ + S+ W P +
Sbjct: 215 QLCFE----NKSLSVDDIVQPTKLMLLYYVKANDVPVRDNIRSRSQSFWRAPHVGRCKLN 270
Query: 492 CDAAFKSVINVNHTGIGLILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELN 313
DAA+++ I G I+ + G C ++ + D E E + L + +A +L+
Sbjct: 271 VDAAYRNNIG---AGFRAIIRDWNGGIVGSACSFKPYFNDPEIVEFQDLSFGLTFALDLS 327
Query: 312 IYQVCFELDAQTIVAAAKEDYQKVRWESQSLAMEVINIFSKHPLWSCEFISRKINKPADK 133
I + E+D ++V A Q + S LA++V +FS + +I R+IN A
Sbjct: 328 ITHLDVEVDCASVVQLATSPSQ-ISSYSSLLAVDVRQLFSCFVSSTITWIPREINVVAQA 386
Query: 132 LAKHSRLFQISRSWIQNPP 76
LA +S + +I+N P
Sbjct: 387 LASYSFYDSFTYFFIENIP 405
>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1369
Score = 79.7 bits (195), Expect = 2e-12
Identities = 86/376 (22%), Positives = 146/376 (38%), Gaps = 9/376 (2%)
Frame = -1
Query: 1146 DRLIWSLTRNGQFTVKSAC--KKLVDIKTNAADVHDANQAXXXXXXXXXNTLPRVKTFLW 973
D+ +W +++NGQFTV+SA + L D KT + N P+VK F W
Sbjct: 1010 DQWMWMMSKNGQFTVRSAYYHELLEDRKTGPSTSRGPNLKLWQKIWKAKIP-PKVKLFSW 1068
Query: 972 KCMNDIIPSSERMGRVMQYFGDMCSMCNQYVETTRHILWECHFSRAVWMSIPGARRIMED 793
K +++ + M + C C + ETT H++W C S W P R +
Sbjct: 1069 KAIHNGLAVYTNMRKRGMNIDGACPRCGEKEETTEHLIWGCDESSRAWYISP-LRIHTGN 1127
Query: 792 VDTMVYD-WITSWFSNDFINLDED*IIKMANASWEIWKERCRCVFDGNKPNPM*TIRSIQ 616
++ + W+ S + D + W IW R + VF+ K + Q
Sbjct: 1128 IEAGSFRIWVESLLDT---HKDTEWWALFWMICWNIWLGRNKWVFEKKK-------LAFQ 1177
Query: 615 YLNQTTGSGMKRTQQQSYHNS----LNNNSRKIWIPPISFAYSICCDAAFKSVINVNHTG 448
+ + G+ +++ H S LN + +PP+ A FK H G
Sbjct: 1178 EVVERAVRGVMEFEEECAHTSPVETLNTHENGWSVPPVGMVKLNVDAAVFK------HVG 1231
Query: 447 IGL--ILCNATGEFKQGRCIYERGYLDAEHAELEGLRRAMLWAEELNIYQVCFELDAQTI 274
IG+ ++ +A G+ C D AE LR + A E + E+D + +
Sbjct: 1232 IGMGGVVRDAEGDVLLATCCGGWAMEDPAMAEACSLRYGLKVAYEAGFRNLVVEMDCKKL 1291
Query: 273 VAAAKEDYQKVRWESQSLAMEVINIFSKHPLWSCEFISRKINKPADKLAKHSRLFQISRS 94
+ V + +++ + SK E + R NK A LA+ + R
Sbjct: 1292 FLQLRGKASDVT-PFGRVVDDILYLASKCSNVVFEHVKRHCNKVAHLLAQMCKNAMEKRV 1350
Query: 93 WIQNPPNFIVDALYAD 46
W++ P+ + A+ D
Sbjct: 1351 WLEEYPSEVSSAVLLD 1366