BLASTX nr result

ID: Papaver23_contig00024139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024139
         (1229 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263...   194   4e-47
ref|XP_002527419.1| RNA binding protein, putative [Ricinus commu...   169   1e-39
ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|2...   168   3e-39
gb|AFK36557.1| unknown [Medicago truncatula]                          166   1e-38
ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotei...   158   3e-36

>ref|XP_002279868.1| PREDICTED: uncharacterized protein LOC100263499 [Vitis vinifera]
           gi|297743102|emb|CBI35969.3| unnamed protein product
           [Vitis vinifera]
          Length = 272

 Score =  194 bits (493), Expect = 4e-47
 Identities = 97/156 (62%), Positives = 114/156 (73%), Gaps = 2/156 (1%)
 Frame = +3

Query: 321 LNKRGKLSADEKETSSNDGDDGFDEPSGNDNPDSSDKDGLTTAESADTTIHGDDTGAPAN 500
           ++KR K S +  ETSS+DGD   DEP+   NPDS + D L TA+S +  +  D T    N
Sbjct: 116 IDKRSKTSTNAHETSSDDGDSESDEPAKTSNPDSGNNDDLVTAKSGEMAVDPDSTLTAVN 175

Query: 501 S--ENTAKGELQPCSTLFIANLGPNCTEDELRQALSPYPGFKIVKMRAKRGMPVAFADFE 674
              E T    L PCSTLFIANLGP CTEDEL+Q LS YPGF ++KMRAK GMPVAFADFE
Sbjct: 176 EQPEKTTDAGLPPCSTLFIANLGPTCTEDELKQVLSQYPGFNVLKMRAKGGMPVAFADFE 235

Query: 675 EVEQANEAMQSLQGTTLPSSDRGGLHLEYARSKMRK 782
           E+EQAN+AM +LQG+ L SSDRGG+HLEYARSKMRK
Sbjct: 236 EIEQANKAMDALQGSMLASSDRGGMHLEYARSKMRK 271


>ref|XP_002527419.1| RNA binding protein, putative [Ricinus communis]
           gi|223533229|gb|EEF34985.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 206

 Score =  169 bits (429), Expect = 1e-39
 Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 13/167 (7%)
 Frame = +3

Query: 321 LNKRGKLSADEKETSSNDGDDGFDEPSG------------NDNPDSSDKDGLTTAESADT 464
           ++KR + +++ +ETSS+ G    DE +              DN DS+++  L   +S + 
Sbjct: 40  IDKRTQQASNAQETSSDYGGSDSDETAAPAPAPAPAPTTATDNTDSANQGDLMNVKS-EP 98

Query: 465 TIHGDDTGAPAN-SENTAKGELQPCSTLFIANLGPNCTEDELRQALSPYPGFKIVKMRAK 641
               D+    AN SE TA+G + PCSTLFIANLGPNCTEDELR  LS YPGF ++KMRAK
Sbjct: 99  AGDPDNASVLANESEKTAEGGVHPCSTLFIANLGPNCTEDELRHTLSQYPGFNVLKMRAK 158

Query: 642 RGMPVAFADFEEVEQANEAMQSLQGTTLPSSDRGGLHLEYARSKMRK 782
            GMPVAFADFEE+EQA +AM+ LQGT LPSSDRGG+H+EYARSKMRK
Sbjct: 159 GGMPVAFADFEEIEQAIKAMEDLQGTLLPSSDRGGMHIEYARSKMRK 205


>ref|XP_002327534.1| predicted protein [Populus trichocarpa] gi|222836088|gb|EEE74509.1|
           predicted protein [Populus trichocarpa]
          Length = 281

 Score =  168 bits (425), Expect = 3e-39
 Identities = 87/156 (55%), Positives = 113/156 (72%), Gaps = 2/156 (1%)
 Frame = +3

Query: 321 LNKRGKLSADEKETSSNDGDDGFDEPSGNDNPDSSDKDGLTTAESADTTIHGDDTGAPAN 500
           ++KR K  +D  ETSS+D +   +E    +N D++ +     A+S +     D+     N
Sbjct: 126 IDKRTKKPSDAHETSSDDVESDPEEDPEMNNVDTAYQGDSENAKS-EAASDPDNAAVAVN 184

Query: 501 S--ENTAKGELQPCSTLFIANLGPNCTEDELRQALSPYPGFKIVKMRAKRGMPVAFADFE 674
              E TA+G ++PCSTLFIANLGPNCTEDEL+Q LS YPGF ++K+RAK GMPVAFADFE
Sbjct: 185 EIGERTAEGGVRPCSTLFIANLGPNCTEDELKQVLSQYPGFHVLKIRAKGGMPVAFADFE 244

Query: 675 EVEQANEAMQSLQGTTLPSSDRGGLHLEYARSKMRK 782
           E+EQA + M++LQ TTLPSSDRGG+H+EYARSKMRK
Sbjct: 245 EIEQATKVMENLQETTLPSSDRGGMHIEYARSKMRK 280


>gb|AFK36557.1| unknown [Medicago truncatula]
          Length = 268

 Score =  166 bits (420), Expect = 1e-38
 Identities = 87/156 (55%), Positives = 112/156 (71%), Gaps = 2/156 (1%)
 Frame = +3

Query: 321 LNKRGKLSADEKETSSNDGDDGFDEPSGNDNPDSSDKDGLTTAESADTTIHGDDTGAPAN 500
           ++KR K  A+ + +SS+DG+   DEPS N     S+   + TA+S D  + G D   P  
Sbjct: 116 IDKRSKGEANVQGSSSDDGESDPDEPSEN----GSNHGDIATAQSGDAVV-GSDNHVPVA 170

Query: 501 SENTAKG--ELQPCSTLFIANLGPNCTEDELRQALSPYPGFKIVKMRAKRGMPVAFADFE 674
                KG  +  PCSTLFIANLGPNCTEDEL+QALS Y GF +VKMR++ GMPVAFADFE
Sbjct: 171 RAQHGKGGGDGGPCSTLFIANLGPNCTEDELKQALSVYAGFNLVKMRSRGGMPVAFADFE 230

Query: 675 EVEQANEAMQSLQGTTLPSSDRGGLHLEYARSKMRK 782
           E++QA + M+ LQG++LPSSDRGG+H+EYARS+MRK
Sbjct: 231 EIDQAVKVMEELQGSSLPSSDRGGMHIEYARSRMRK 266


>ref|XP_004141677.1| PREDICTED: U2 small nuclear ribonucleoprotein B''-like [Cucumis
           sativus]
          Length = 262

 Score =  158 bits (399), Expect = 3e-36
 Identities = 80/155 (51%), Positives = 105/155 (67%)
 Frame = +3

Query: 321 LNKRGKLSADEKETSSNDGDDGFDEPSGNDNPDSSDKDGLTTAESADTTIHGDDTGAPAN 500
           ++KR K  A+ +ETSS+DG    DEPS               A+ ++  +        A 
Sbjct: 121 IDKRKKTDANSQETSSDDGGSEPDEPSKK-------------AQQSNEAVVTPANAISAP 167

Query: 501 SENTAKGELQPCSTLFIANLGPNCTEDELRQALSPYPGFKIVKMRAKRGMPVAFADFEEV 680
            E+  K +  PCSTLFIANLGPNC EDEL++ L  YPGF ++K+RAK GMPVAFADFE++
Sbjct: 168 YEHHEKNDGGPCSTLFIANLGPNCNEDELKEVLCKYPGFNVLKLRAKSGMPVAFADFEDI 227

Query: 681 EQANEAMQSLQGTTLPSSDRGGLHLEYARSKMRKT 785
           EQA++ M+ LQG+ LPSSDRGG+H+EYARSKMRK+
Sbjct: 228 EQASKVMEELQGSVLPSSDRGGMHIEYARSKMRKS 262


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