BLASTX nr result

ID: Papaver23_contig00024137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00024137
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   155   2e-35
ref|XP_002320386.1| methyl binding domain protein [Populus trich...   143   6e-32
ref|XP_002331766.1| methyl binding domain protein [Populus trich...   142   2e-31
emb|CBI32313.3| unnamed protein product [Vitis vinifera]              140   5e-31
ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-contain...   140   5e-31

>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  155 bits (391), Expect = 2e-35
 Identities = 73/157 (46%), Positives = 99/157 (63%), Gaps = 5/157 (3%)
 Frame = +3

Query: 159 REVSAYAVQCSKCSKWRLISTLEEYEDIREASLQNPWSCGNXXXXXXXXXXXXXXXXTRI 338
           R V  YA QC KC KWR+I T EEYE+IR   ++NP+ C                  +R 
Sbjct: 2   RSVDTYAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRT 61

Query: 339 WAMDKPNLPKSPAGFERGMTIRRDCTRLDVYYETSNGKKLRSITEVQKFLEANPEYKAAG 518
           W +DKP LPK+P GF+R + +RRD +++D YY T  GKKLR+  E+  FLEANP+YK  G
Sbjct: 62  WVIDKPGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKYK--G 119

Query: 519 ITISDFNFKAPRVLENTIPEDI-----ASSKKKTKTS 614
           ++I DFNF +P+V+E T+PED+     ++S KK K S
Sbjct: 120 VSIEDFNFTSPKVMEETVPEDVKKATASASSKKVKAS 156


>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  143 bits (361), Expect = 6e-32
 Identities = 67/164 (40%), Positives = 97/164 (59%), Gaps = 5/164 (3%)
 Frame = +3

Query: 141 KTAENN-----REVSAYAVQCSKCSKWRLISTLEEYEDIREASLQNPWSCGNXXXXXXXX 305
           KT+  N     R +  YA QC KC KWR+I+T EEYE+IR    ++P+ C          
Sbjct: 12  KTSSKNPRVAVRSIDTYAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRKPGVSCDD 71

Query: 306 XXXXXXXXTRIWAMDKPNLPKSPAGFERGMTIRRDCTRLDVYYETSNGKKLRSITEVQKF 485
                   TR W +D+P +PK+P GF+R + +RRD +++D YY T  GKKLR+  E+  F
Sbjct: 72  PADIEYNATRTWVIDRPGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAF 131

Query: 486 LEANPEYKAAGITISDFNFKAPRVLENTIPEDIASSKKKTKTSN 617
           ++ANP+YK   + +SDFNF +P+V+E+TIPED       +   N
Sbjct: 132 IDANPKYK--DVNLSDFNFTSPKVMEDTIPEDAVRKVSSSGNGN 173


>ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
           gi|224117178|ref|XP_002331767.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
           gi|222874359|gb|EEF11490.1| methyl binding domain
           protein [Populus trichocarpa]
           gi|222874360|gb|EEF11491.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
          Length = 182

 Score =  142 bits (357), Expect = 2e-31
 Identities = 65/153 (42%), Positives = 91/153 (59%)
 Frame = +3

Query: 159 REVSAYAVQCSKCSKWRLISTLEEYEDIREASLQNPWSCGNXXXXXXXXXXXXXXXXTRI 338
           R +  YA QC KC KWR+I T EEYE+IR    +NP+ C                  TR 
Sbjct: 23  RSIDTYAAQCDKCLKWRVIPTEEEYEEIRSKMEENPYVCDRKPGVSCDDPADIEYNATRT 82

Query: 339 WAMDKPNLPKSPAGFERGMTIRRDCTRLDVYYETSNGKKLRSITEVQKFLEANPEYKAAG 518
           W +D+P +PK+P GF+R + +RRD +++D YY T  GKKLR+  E+  F+EANP+YK   
Sbjct: 83  WVIDRPGVPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIEANPKYK--D 140

Query: 519 ITISDFNFKAPRVLENTIPEDIASSKKKTKTSN 617
           + +S FNF +P+V+E+TIPED       +   N
Sbjct: 141 VNLSAFNFTSPKVMEDTIPEDAVRKVPSSANGN 173


>emb|CBI32313.3| unnamed protein product [Vitis vinifera]
          Length = 176

 Score =  140 bits (353), Expect = 5e-31
 Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
 Frame = +3

Query: 120 ESQGGNLKTAENNREVSAYAVQCSKCSKWRLISTLEEYEDIREASLQNPWSCGNXXXXXX 299
           +++G   K+A     + AYAVQC  C KWRLI T EEYE+IR   ++ P+ C        
Sbjct: 3   KTKGKKRKSALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSC 62

Query: 300 XXXXXXXXXXTRIWAMDKPNLPKSPAGFERGMTIRRDCTRLDVYYETSNGKKLRSITEVQ 479
                     TR WA DKPN+PK+P GF+R + +R+D +++D YY T  GKK+R+++E+ 
Sbjct: 63  EDPTDIEYDATRTWAADKPNVPKTPKGFQRDLVLRKDFSKMDAYYITPTGKKVRALSEIA 122

Query: 480 KFLEANPEYKAAGITISDFNFKAPRVLENTIPEDI-------ASSKKKTKTSN 617
            +L +NP+ K   ++ SDFNF  P+++ +TIP  I        S+KK+ K+ N
Sbjct: 123 AYLSSNPDCK--DLSPSDFNFMVPKIMADTIPAHIERKVSTSGSNKKRKKSEN 173


>ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           isoform 1 [Vitis vinifera]
          Length = 179

 Score =  140 bits (353), Expect = 5e-31
 Identities = 68/173 (39%), Positives = 103/173 (59%), Gaps = 7/173 (4%)
 Frame = +3

Query: 120 ESQGGNLKTAENNREVSAYAVQCSKCSKWRLISTLEEYEDIREASLQNPWSCGNXXXXXX 299
           +++G   K+A     + AYAVQC  C KWRLI T EEYE+IR   ++ P+ C        
Sbjct: 6   KTKGKKRKSALVRSSIGAYAVQCEACLKWRLIDTEEEYEEIRSRFIEEPFVCSKKADVSC 65

Query: 300 XXXXXXXXXXTRIWAMDKPNLPKSPAGFERGMTIRRDCTRLDVYYETSNGKKLRSITEVQ 479
                     TR WA DKPN+PK+P GF+R + +R+D +++D YY T  GKK+R+++E+ 
Sbjct: 66  EDPTDIEYDATRTWAADKPNVPKTPKGFQRDLVLRKDFSKMDAYYITPTGKKVRALSEIA 125

Query: 480 KFLEANPEYKAAGITISDFNFKAPRVLENTIPEDI-------ASSKKKTKTSN 617
            +L +NP+ K   ++ SDFNF  P+++ +TIP  I        S+KK+ K+ N
Sbjct: 126 AYLSSNPDCK--DLSPSDFNFMVPKIMADTIPAHIERKVSTSGSNKKRKKSEN 176


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