BLASTX nr result

ID: Papaver23_contig00023854 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023854
         (646 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]                 60   1e-09
ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulga...    60   1e-09
ref|XP_003551270.1| PREDICTED: uncharacterized protein LOC100784...    55   8e-09
gb|AAQ82037.1| gag/pol polyprotein [Pisum sativum]                     54   2e-08
gb|AAQ82033.1| gag/pol polyprotein [Pisum sativum]                     54   3e-08

>dbj|BAD66751.1| orf764 [Beta vulgaris subsp. vulgaris]
          Length = 764

 Score = 60.1 bits (144), Expect(2) = 1e-09
 Identities = 25/74 (33%), Positives = 49/74 (66%)
 Frame = +2

Query: 368 FAFRLEFASTNNETKYEAVIHA*KFAIEMKLENAKITSDSQLVILQIKGEYTTNKPSLRK 547
           F + ++F ++NNE +YEA I   K  +    +  ++ +DSQLV  QI+GEY   +P+++K
Sbjct: 224 FEYAIKFKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQK 283

Query: 548 YKRLVEELSANRLT 589
           Y +++++L+A  ++
Sbjct: 284 YLQMIKDLAAQLIS 297



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 270 EPDG-WEILVDESSNGEGNGIGVVFISTEG 356
           EP G W++ VD S+   G+G G++  S EG
Sbjct: 192 EPVGVWKLAVDGSAAQTGSGAGIIMTSPEG 221


>ref|NP_063998.1| orf764 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|323435157|ref|YP_004222375.1| hypothetical protein
           BevumaM_p142 [Beta vulgaris subsp. maritima]
           gi|346683249|ref|YP_004842181.1| hypothetical protein
           BemaM_p137 [Beta macrocarpa] gi|9049300|dbj|BAA99310.1|
           orf764 [Beta vulgaris subsp. vulgaris]
           gi|317905608|emb|CBJ14014.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439890|emb|CBJ17590.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148045|emb|CBJ20708.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500167|emb|CBX24986.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977907|emb|CBL54131.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 764

 Score = 60.1 bits (144), Expect(2) = 1e-09
 Identities = 25/74 (33%), Positives = 49/74 (66%)
 Frame = +2

Query: 368 FAFRLEFASTNNETKYEAVIHA*KFAIEMKLENAKITSDSQLVILQIKGEYTTNKPSLRK 547
           F + ++F ++NNE +YEA I   K  +    +  ++ +DSQLV  QI+GEY   +P+++K
Sbjct: 224 FEYAIKFKASNNEAEYEAAIAGIKMCMAADAKKIRLQTDSQLVASQIRGEYEAREPAMQK 283

Query: 548 YKRLVEELSANRLT 589
           Y +++++L+A  ++
Sbjct: 284 YLQMIKDLAAQLIS 297



 Score = 28.1 bits (61), Expect(2) = 1e-09
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 270 EPDG-WEILVDESSNGEGNGIGVVFISTEG 356
           EP G W++ VD S+   G+G G++  S EG
Sbjct: 192 EPVGVWKLAVDGSAAQTGSGAGIIMTSPEG 221


>ref|XP_003551270.1| PREDICTED: uncharacterized protein LOC100784162 [Glycine max]
          Length = 1145

 Score = 55.5 bits (132), Expect(2) = 8e-09
 Identities = 30/71 (42%), Positives = 42/71 (59%)
 Frame = +2

Query: 368  FAFRLEFASTNNETKYEAVIHA*KFAIEMKLENAKITSDSQLVILQIKGEYTTNKPSLRK 547
            F  RL F  TNN  +YEA   A + AI+  ++  K+  DS LVI Q++GE+ T  P L  
Sbjct: 1047 FTARLGFDCTNNMAEYEACALAVQAAIDSNVKLLKVYGDSALVIHQLRGEWETRDPKLIP 1106

Query: 548  YKRLVEELSAN 580
            YK  ++EL+ N
Sbjct: 1107 YKTYIKELAKN 1117



 Score = 30.0 bits (66), Expect(2) = 8e-09
 Identities = 12/35 (34%), Positives = 22/35 (62%)
 Frame = +3

Query: 255  KELLTEPDGWEILVDESSNGEGNGIGVVFISTEGE 359
            ++L  + D W +  DE+SN  G+G+G V +S + +
Sbjct: 1009 EKLDEDRDKWTVWFDEASNILGHGVGAVLVSPDNQ 1043


>gb|AAQ82037.1| gag/pol polyprotein [Pisum sativum]
          Length = 2262

 Score = 53.9 bits (128), Expect(2) = 2e-08
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = +2

Query: 368  FAFRLEFASTNNETKYEAVIHA*KFAIEMKLENAKITSDSQLVILQIKGEYTTNKPSLRK 547
            F+ RL F  TNNE +YEA I   + AI+++++   I  DS LV+ Q+ G++ TN+P L  
Sbjct: 1715 FSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIFGDSALVVNQVNGDWNTNQPHLIP 1774

Query: 548  YK 553
            Y+
Sbjct: 1775 YR 1776



 Score = 30.4 bits (67), Expect(2) = 2e-08
 Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
 Frame = +3

Query: 249  DPKELLTEP-----DGWEILVDESSNGEGNGIGVVFISTEG 356
            D KE L E      D W ++ D + N  GNG+G V I+ +G
Sbjct: 1670 DCKEPLVEEGPDPDDKWTLMFDGAVNMNGNGVGAVLINPKG 1710


>gb|AAQ82033.1| gag/pol polyprotein [Pisum sativum]
          Length = 1814

 Score = 53.9 bits (128), Expect(2) = 3e-08
 Identities = 26/62 (41%), Positives = 40/62 (64%)
 Frame = +2

Query: 368  FAFRLEFASTNNETKYEAVIHA*KFAIEMKLENAKITSDSQLVILQIKGEYTTNKPSLRK 547
            F+ RL F  TNNE +YEA I   + AI+++++   I  DS LV+ Q+ G++ TN+P L  
Sbjct: 1717 FSARLTFDVTNNEAEYEACIMGIEEAIDLRIKTLDIYGDSALVVNQVNGDWNTNQPHLIP 1776

Query: 548  YK 553
            Y+
Sbjct: 1777 YR 1778



 Score = 29.6 bits (65), Expect(2) = 3e-08
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 276  DGWEILVDESSNGEGNGIGVVFISTEG 356
            D W ++ D + N  GNG+G V I+ +G
Sbjct: 1686 DKWTLMFDGAVNMNGNGVGAVLINPKG 1712


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