BLASTX nr result

ID: Papaver23_contig00023826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023826
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...    69   5e-10
emb|CBI21810.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_004151803.1| PREDICTED: DNA repair protein recA homolog 1...    64   2e-08
ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1...    64   2e-08
ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-07

>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Vitis vinifera]
          Length = 415

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/68 (54%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
 Frame = -2

Query: 200 FHLSPLKFQVSRFIRFSS--SKLRSSNKQKRARCEFDIKGNGAVSGDSDPRSIDRQKALE 27
           FH  PLK  +      SS    + +  +Q R RCEF++K NGA+S D DPR +DRQKALE
Sbjct: 10  FHHFPLKTLLPSAFPSSSLPPHMGAKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALE 69

Query: 26  AAMNDINS 3
           AAMNDINS
Sbjct: 70  AAMNDINS 77


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -2

Query: 134 SSNKQKRARCEFDIKGNGAVSGDSDPRSIDRQKALEAAMNDINS 3
           +  +Q R RCEF++K NGA+S D DPR +DRQKALEAAMNDINS
Sbjct: 3   AKRQQMRLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINS 46


>ref|XP_004151803.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
           partial [Cucumis sativus]
          Length = 125

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = -2

Query: 149 SSKLRSSNKQKRARCEFDIKGNGAVSGDSDPRSIDRQKALEAAMNDIN 6
           SS   +  + +  RCEF++  NGA+SGD DPRS+DR+KALEAAMNDIN
Sbjct: 34  SSLSNAGKRVRELRCEFEVNLNGALSGDFDPRSVDRKKALEAAMNDIN 81


>ref|XP_004151021.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Cucumis sativus]
          Length = 417

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/48 (60%), Positives = 37/48 (77%)
 Frame = -2

Query: 149 SSKLRSSNKQKRARCEFDIKGNGAVSGDSDPRSIDRQKALEAAMNDIN 6
           SS   +  + +  RCEF++  NGA+SGD DPRS+DR+KALEAAMNDIN
Sbjct: 34  SSLSNAGKRVRELRCEFEVNLNGALSGDFDPRSVDRKKALEAAMNDIN 81


>ref|XP_002332188.1| predicted protein [Populus trichocarpa] gi|222875295|gb|EEF12426.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/68 (54%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = -2

Query: 200 FHLS-PLKFQVSRFIRFSSSKLRSSNKQKRARCEFDIKGNGA-VSGDSDPRSIDRQKALE 27
           FH S PL FQ SR    +S       K K  RCEFD K NG+ +S D D R +D+QKALE
Sbjct: 1   FHPSLPLYFQFSRVCFKTSHFAAVKKKPKEIRCEFDSKVNGSPLSSDLDARFLDKQKALE 60

Query: 26  AAMNDINS 3
           AAMNDIN+
Sbjct: 61  AAMNDINN 68


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