BLASTX nr result

ID: Papaver23_contig00023353 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023353
         (458 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|1...   241   4e-62
ref|XP_002282635.1| PREDICTED: putative exosome complex componen...   241   4e-62
ref|XP_004138110.1| PREDICTED: putative exosome complex componen...   231   4e-59
ref|XP_003518749.1| PREDICTED: putative exosome complex componen...   228   5e-58
ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycin...   226   2e-57

>ref|XP_002318044.1| predicted protein [Populus trichocarpa] gi|118482713|gb|ABK93275.1|
           unknown [Populus trichocarpa]
           gi|222858717|gb|EEE96264.1| predicted protein [Populus
           trichocarpa]
          Length = 242

 Score =  241 bits (615), Expect = 4e-62
 Identities = 113/143 (79%), Positives = 132/143 (92%)
 Frame = +1

Query: 28  KKKHSDSQSTMVDKIVVPGDVVLDLSKLSNQTIKLGDGLRQDCDSITVMKSGKLRFSKPN 207
           + K S S +T +D +VVPGDVV+DLS ++NQTIKLG GLRQDCD+I+VMK+GKLRFSKPN
Sbjct: 2   ESKSSGSPATFIDNLVVPGDVVVDLSSMTNQTIKLGSGLRQDCDAISVMKAGKLRFSKPN 61

Query: 208 KYWVESSQKRYVPCVDDTVLGIVLDSKADNFLVDIKGPAVAFLPVLAFEGGTRRNIPKFE 387
           KYWVE+SQKRYVPC +D+VLGIV+DSK+DNFL+DIKGPA+AFLPVLAFEGGTRRNIPKFE
Sbjct: 62  KYWVETSQKRYVPCAEDSVLGIVVDSKSDNFLIDIKGPALAFLPVLAFEGGTRRNIPKFE 121

Query: 388 PGSLIYVRVVKANMGMNPELSCT 456
            G+L+YVRVVKAN GMNPELSCT
Sbjct: 122 AGTLLYVRVVKANPGMNPELSCT 144


>ref|XP_002282635.1| PREDICTED: putative exosome complex component rrp40 [Vitis
           vinifera] gi|297733775|emb|CBI15022.3| unnamed protein
           product [Vitis vinifera]
          Length = 237

 Score =  241 bits (615), Expect = 4e-62
 Identities = 115/138 (83%), Positives = 130/138 (94%)
 Frame = +1

Query: 43  DSQSTMVDKIVVPGDVVLDLSKLSNQTIKLGDGLRQDCDSITVMKSGKLRFSKPNKYWVE 222
           ++ ++ VD++VVPGDVVLDLSK+ NQTIKLG GL QDCD+ITV K+G+LRFSKPNKYWVE
Sbjct: 4   NTPASFVDQLVVPGDVVLDLSKMGNQTIKLGGGLHQDCDAITVTKAGRLRFSKPNKYWVE 63

Query: 223 SSQKRYVPCVDDTVLGIVLDSKADNFLVDIKGPAVAFLPVLAFEGGTRRNIPKFEPGSLI 402
           SSQKRYVPCV+DTVLGIV+DSKADNFLVDIKGPA+AFLPVLAFEGGTRRNIPKFE G+L+
Sbjct: 64  SSQKRYVPCVEDTVLGIVVDSKADNFLVDIKGPALAFLPVLAFEGGTRRNIPKFEAGTLL 123

Query: 403 YVRVVKANMGMNPELSCT 456
           YVRVVKAN GMNPELSCT
Sbjct: 124 YVRVVKANTGMNPELSCT 141


>ref|XP_004138110.1| PREDICTED: putative exosome complex component rrp40-like [Cucumis
           sativus] gi|449477413|ref|XP_004155016.1| PREDICTED:
           putative exosome complex component rrp40-like [Cucumis
           sativus]
          Length = 243

 Score =  231 bits (590), Expect = 4e-59
 Identities = 113/142 (79%), Positives = 128/142 (90%)
 Frame = +1

Query: 31  KKHSDSQSTMVDKIVVPGDVVLDLSKLSNQTIKLGDGLRQDCDSITVMKSGKLRFSKPNK 210
           +K S S ST+VD+ VVPGDVVLDLS ++N+TIKLG GLRQD D+I+V K GKLRFSKPNK
Sbjct: 3   EKPSSSSSTLVDQPVVPGDVVLDLSNMANETIKLGGGLRQDQDAISVSKVGKLRFSKPNK 62

Query: 211 YWVESSQKRYVPCVDDTVLGIVLDSKADNFLVDIKGPAVAFLPVLAFEGGTRRNIPKFEP 390
           YWVESSQKRYVPC +D VLGIVLDS+ADNFLVDIKGP++AFLPVLAFEGGTRRNIPKFE 
Sbjct: 63  YWVESSQKRYVPCAEDCVLGIVLDSRADNFLVDIKGPSLAFLPVLAFEGGTRRNIPKFEM 122

Query: 391 GSLIYVRVVKANMGMNPELSCT 456
           G+L+YVRVVK N GMNPEL+CT
Sbjct: 123 GALLYVRVVKVNPGMNPELACT 144


>ref|XP_003518749.1| PREDICTED: putative exosome complex component rrp40-like [Glycine
           max]
          Length = 240

 Score =  228 bits (580), Expect = 5e-58
 Identities = 108/141 (76%), Positives = 128/141 (90%)
 Frame = +1

Query: 34  KHSDSQSTMVDKIVVPGDVVLDLSKLSNQTIKLGDGLRQDCDSITVMKSGKLRFSKPNKY 213
           K S S + +VD+ V PGDV+LDLS ++NQTIKLG GLRQDCD+I+VMK+G+LRFSKPNKY
Sbjct: 4   KSSSSSTNLVDQSVCPGDVILDLSNMTNQTIKLGGGLRQDCDAISVMKAGRLRFSKPNKY 63

Query: 214 WVESSQKRYVPCVDDTVLGIVLDSKADNFLVDIKGPAVAFLPVLAFEGGTRRNIPKFEPG 393
           WVE+SQKRYVP  +D+VLGIV+DS++DNFLVDIKGPA+AFLPVLAFEGGTRRNIP+FE G
Sbjct: 64  WVENSQKRYVPHAEDSVLGIVVDSRSDNFLVDIKGPALAFLPVLAFEGGTRRNIPRFEIG 123

Query: 394 SLIYVRVVKANMGMNPELSCT 456
           +LIY RVVKAN GMNPEL+CT
Sbjct: 124 TLIYARVVKANPGMNPELACT 144


>ref|NP_001241402.1| uncharacterized protein LOC100809941 [Glycine max]
           gi|255636017|gb|ACU18353.1| unknown [Glycine max]
          Length = 179

 Score =  226 bits (575), Expect = 2e-57
 Identities = 108/141 (76%), Positives = 128/141 (90%)
 Frame = +1

Query: 34  KHSDSQSTMVDKIVVPGDVVLDLSKLSNQTIKLGDGLRQDCDSITVMKSGKLRFSKPNKY 213
           K + S + +VD+ V PGDVVLDLSK+ NQTIKLG GLRQDCD+I+VMK+G+LRFSKP+KY
Sbjct: 4   KSTSSFTNLVDQSVCPGDVVLDLSKMINQTIKLGGGLRQDCDAISVMKAGRLRFSKPHKY 63

Query: 214 WVESSQKRYVPCVDDTVLGIVLDSKADNFLVDIKGPAVAFLPVLAFEGGTRRNIPKFEPG 393
           WVE+SQKRYVP  +D+VLGIV+DS++DNFLVDIKGP +AFLPVLAFEGGTRRNIP+FE G
Sbjct: 64  WVENSQKRYVPYAEDSVLGIVVDSRSDNFLVDIKGPTLAFLPVLAFEGGTRRNIPRFEIG 123

Query: 394 SLIYVRVVKANMGMNPELSCT 456
           +LIYVRV+KAN GMNPELSCT
Sbjct: 124 TLIYVRVIKANPGMNPELSCT 144


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