BLASTX nr result

ID: Papaver23_contig00023164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023164
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   272   3e-71
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   269   3e-70
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   268   5e-70
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   268   8e-70
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   268   8e-70

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  272 bits (696), Expect = 3e-71
 Identities = 141/209 (67%), Positives = 172/209 (82%), Gaps = 3/209 (1%)
 Frame = -3

Query: 623 PWMRAPINVNLIEDILLEHVPGLDPRLVEALSNISENFTTLYPIQYAVWKQTIGPGQFER 444
           PWMR+PI+V+L E+  L   P LDPRL  AL N+   F++L+P+Q AVW++T+GPG FER
Sbjct: 14  PWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMG--FSSLFPVQVAVWQETVGPGAFER 71

Query: 443 DLCINSPTGSGKTLSYALPIVQSLSTRNVRRIRALIVLPSRDLADQVKSVFESIAPAVGL 264
           DLCINSPTGSGKTL+YALPIV  LS+R V+ +RAL+VLP+RDLA QVK VF +IAPAVGL
Sbjct: 72  DLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKEVFAAIAPAVGL 131

Query: 263 TVGSAIGGKGKMSDEISQLIKRPALEAGVWYDPEK---ELESGVDILVATPGRLMDHINT 93
           +VG A+ G+  ++DEIS+LIKRP LEAG+ YDPE    EL+S VDILVATPGRLMDHINT
Sbjct: 132 SVGLAV-GQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVATPGRLMDHINT 190

Query: 92  TKGFTLEHLRFLVVDEIDKLLGEEYQDFL 6
           TKGFTL+HLR+LVVDE D+LL E YQ +L
Sbjct: 191 TKGFTLKHLRYLVVDETDRLLREAYQSWL 219


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  269 bits (687), Expect = 3e-70
 Identities = 137/209 (65%), Positives = 172/209 (82%), Gaps = 3/209 (1%)
 Frame = -3

Query: 623 PWMRAPINVNLIEDILLEHVPGLDPRLVEALSNISENFTTLYPIQYAVWKQTIGPGQFER 444
           PWMR+P++V+LIE+  LE +P LD RL  AL N+    ++L+P+Q AVW++ IGPG F+R
Sbjct: 14  PWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMG--ISSLFPVQLAVWQEAIGPGSFDR 71

Query: 443 DLCINSPTGSGKTLSYALPIVQSLSTRNVRRIRALIVLPSRDLADQVKSVFESIAPAVGL 264
           DLCINSPTGSGKTL+YALPIVQ LS+R V+ +RAL+VLP+RDLA QVK VF +IAPAVGL
Sbjct: 72  DLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFSAIAPAVGL 131

Query: 263 TVGSAIGGKGKMSDEISQLIKRPALEAGVWYDPEK---ELESGVDILVATPGRLMDHINT 93
           +VG A+ G+  ++DEIS+LIKRP LEAG+ YDP+    EL+S VDILVATPGRLMDHIN 
Sbjct: 132 SVGLAV-GQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPGRLMDHINF 190

Query: 92  TKGFTLEHLRFLVVDEIDKLLGEEYQDFL 6
           TKGFTL+HLR+LV+DE D+LL E YQ +L
Sbjct: 191 TKGFTLQHLRYLVIDETDRLLREAYQSWL 219


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  268 bits (686), Expect = 5e-70
 Identities = 136/209 (65%), Positives = 173/209 (82%), Gaps = 3/209 (1%)
 Frame = -3

Query: 623 PWMRAPINVNLIEDILLEHVPGLDPRLVEALSNISENFTTLYPIQYAVWKQTIGPGQFER 444
           PWMRAP++V+ +E+  L+ +P L+P+L +AL N+    ++L+P+Q AVW +TIGPG FER
Sbjct: 16  PWMRAPVDVSNVENCALDTLPCLNPKLKKALENMG--ISSLFPVQVAVWHETIGPGGFER 73

Query: 443 DLCINSPTGSGKTLSYALPIVQSLSTRNVRRIRALIVLPSRDLADQVKSVFESIAPAVGL 264
           D+C+NSPTGSGKTLSYALPIVQ L++R VR +RAL+VLP+RDLA QVK VF++IAPAVGL
Sbjct: 74  DICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGL 133

Query: 263 TVGSAIGGKGKMSDEISQLIKRPALEAGVWYDPE---KELESGVDILVATPGRLMDHINT 93
           +VGSA+ G+  ++ EISQLIK P L+AG+ YDP+   + LES VDILVATPGRLMDHIN 
Sbjct: 134 SVGSAV-GQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINN 192

Query: 92  TKGFTLEHLRFLVVDEIDKLLGEEYQDFL 6
           TKGFTLEHLR+LVVDE D+LL E YQ +L
Sbjct: 193 TKGFTLEHLRYLVVDETDRLLREAYQSWL 221


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  268 bits (684), Expect = 8e-70
 Identities = 136/209 (65%), Positives = 171/209 (81%), Gaps = 3/209 (1%)
 Frame = -3

Query: 623 PWMRAPINVNLIEDILLEHVPGLDPRLVEALSNISENFTTLYPIQYAVWKQTIGPGQFER 444
           PWMRAP++V+ +E+  LE +P L+P+L +AL N+    ++L+P+Q AVW +TIGPG FER
Sbjct: 16  PWMRAPVDVSNVENCALETLPCLNPKLKKALENMG--ISSLFPVQVAVWHETIGPGGFER 73

Query: 443 DLCINSPTGSGKTLSYALPIVQSLSTRNVRRIRALIVLPSRDLADQVKSVFESIAPAVGL 264
           D+C+NSPTGSGKTLSYALPIVQ L++R VR +RAL+VLP+RDLA QVK VF++IAP VGL
Sbjct: 74  DICVNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLALQVKDVFDAIAPTVGL 133

Query: 263 TVGSAIGGKGKMSDEISQLIKRPALEAGVWYDPE---KELESGVDILVATPGRLMDHINT 93
           +VGSA+ G+  ++ EISQLIK P L+AG+ YDPE   +  ES VDILVATPGRLMDHIN 
Sbjct: 134 SVGSAV-GQSSIAGEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVATPGRLMDHINN 192

Query: 92  TKGFTLEHLRFLVVDEIDKLLGEEYQDFL 6
           TKGFTLEHLR+LVVDE D+LL E YQ +L
Sbjct: 193 TKGFTLEHLRYLVVDETDRLLREAYQSWL 221


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  268 bits (684), Expect = 8e-70
 Identities = 138/209 (66%), Positives = 171/209 (81%), Gaps = 3/209 (1%)
 Frame = -3

Query: 623 PWMRAPINVNLIEDILLEHVPGLDPRLVEALSNISENFTTLYPIQYAVWKQTIGPGQFER 444
           PWMR+P++V+  E+  L+ +P LDPRL  AL N+   F TL+P+Q AVW++TIGPG FER
Sbjct: 17  PWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMG--FKTLFPVQIAVWQETIGPGAFER 74

Query: 443 DLCINSPTGSGKTLSYALPIVQSLSTRNVRRIRALIVLPSRDLADQVKSVFESIAPAVGL 264
           DLCINSPTGSGKTL+YALPIVQ LSTR V+ +RAL+VLP+RDLA QVK VF +IAPA+GL
Sbjct: 75  DLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQVKQVFAAIAPAMGL 134

Query: 263 TVGSAIGGKGKMSDEISQLIKRPALEAGVWYDPE---KELESGVDILVATPGRLMDHINT 93
           +VG A+ G+  ++DEIS+LIK+P  EAG+ YDP+   +EL+S VDILVATPGRLMDHI T
Sbjct: 135 SVGLAV-GQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRLMDHITT 193

Query: 92  TKGFTLEHLRFLVVDEIDKLLGEEYQDFL 6
           TKGFTLEHL +LVVDE D+LL E YQ +L
Sbjct: 194 TKGFTLEHLCYLVVDETDRLLRESYQSWL 222


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