BLASTX nr result

ID: Papaver23_contig00023111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023111
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40588.3| unnamed protein product [Vitis vinifera]              174   8e-42
ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing fac...   174   8e-42
ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...   157   1e-36
ref|XP_002523299.1| arginine/serine-rich splicing factor, putati...   156   2e-36
ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing fac...   155   3e-36

>emb|CBI40588.3| unnamed protein product [Vitis vinifera]
          Length = 224

 Score =  174 bits (441), Expect = 8e-42
 Identities = 93/150 (62%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
 Frame = -3

Query: 553 RPTKTLFVINFDPVDTRIRDIEKHFEPYGKVLHVRIRRNFAFVQFETQEEATKALECTHM 374
           RPTKTLFVINFDP+ TRIRDIE+HFEPYGKVLHVRIRRNFAFVQ+ETQE+ATKALECTHM
Sbjct: 73  RPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECTHM 132

Query: 373 SKICGRVVSVEYAL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGRAHSP 197
           SKI  RVVSVEYAL                                      DYGRA SP
Sbjct: 133 SKILDRVVSVEYALRDDSDKYDSPRRGGYSRRGESPYGRSPSPVNRRGRPSPDYGRAQSP 192

Query: 196 VYDRYKGPSSNRDRSPDYGRYPCGSPIPRS 107
           VYDRY GP+  R+RSP+YGRY   SP+ RS
Sbjct: 193 VYDRYNGPAYERNRSPEYGRYRSRSPVRRS 222


>ref|XP_002267297.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Vitis
           vinifera]
          Length = 241

 Score =  174 bits (441), Expect = 8e-42
 Identities = 93/150 (62%), Positives = 101/150 (67%), Gaps = 1/150 (0%)
 Frame = -3

Query: 553 RPTKTLFVINFDPVDTRIRDIEKHFEPYGKVLHVRIRRNFAFVQFETQEEATKALECTHM 374
           RPTKTLFVINFDP+ TRIRDIE+HFEPYGKVLHVRIRRNFAFVQ+ETQE+ATKALECTHM
Sbjct: 90  RPTKTLFVINFDPIRTRIRDIERHFEPYGKVLHVRIRRNFAFVQYETQEDATKALECTHM 149

Query: 373 SKICGRVVSVEYAL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGRAHSP 197
           SKI  RVVSVEYAL                                      DYGRA SP
Sbjct: 150 SKILDRVVSVEYALRDDSDKYDSPRRGGYSRRGESPYGRSPSPVNRRGRPSPDYGRAQSP 209

Query: 196 VYDRYKGPSSNRDRSPDYGRYPCGSPIPRS 107
           VYDRY GP+  R+RSP+YGRY   SP+ RS
Sbjct: 210 VYDRYNGPAYERNRSPEYGRYRSRSPVRRS 239


>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 264

 Score =  157 bits (397), Expect = 1e-36
 Identities = 84/140 (60%), Positives = 92/140 (65%)
 Frame = -3

Query: 553 RPTKTLFVINFDPVDTRIRDIEKHFEPYGKVLHVRIRRNFAFVQFETQEEATKALECTHM 374
           +PTKTLFVINFDP+ TR+RDIEKHFEPYG VLHVRIRRNFAFVQFETQE+ATKA+ECT+M
Sbjct: 88  KPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKAIECTNM 147

Query: 373 SKICGRVVSVEYALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGRAHSPV 194
           SKI  RVVSVEYAL                                     DYGR  SPV
Sbjct: 148 SKILDRVVSVEYAL------RDDGERGDNYDSPRRGGYERSPSPYHRRPSPDYGRPRSPV 201

Query: 193 YDRYKGPSSNRDRSPDYGRY 134
           YDRY G   +R RSPDYGR+
Sbjct: 202 YDRYNGGGPDRRRSPDYGRH 221


>ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223537387|gb|EEF39015.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 259

 Score =  156 bits (395), Expect = 2e-36
 Identities = 83/139 (59%), Positives = 93/139 (66%)
 Frame = -3

Query: 553 RPTKTLFVINFDPVDTRIRDIEKHFEPYGKVLHVRIRRNFAFVQFETQEEATKALECTHM 374
           RPTKTLFVINFDP+ TR+ DI++HFE YG+VLHVRIRRNFAFVQFETQE+ATKALECTHM
Sbjct: 91  RPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTHM 150

Query: 373 SKICGRVVSVEYALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGRAHSPV 194
           +KI  RVVSVEYAL                                     DYGRA SPV
Sbjct: 151 TKILDRVVSVEYAL----RDDSERGDKSDSPRRGSHYGRSPSPVYRRRPSPDYGRARSPV 206

Query: 193 YDRYKGPSSNRDRSPDYGR 137
           YD+Y GPS +R RSP+YGR
Sbjct: 207 YDKYNGPSYDRRRSPEYGR 225


>ref|XP_003528779.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
           max]
          Length = 259

 Score =  155 bits (393), Expect = 3e-36
 Identities = 84/140 (60%), Positives = 91/140 (65%)
 Frame = -3

Query: 553 RPTKTLFVINFDPVDTRIRDIEKHFEPYGKVLHVRIRRNFAFVQFETQEEATKALECTHM 374
           +PTKTLFVINFDP+ TR+RDIEKHFEPYG VLHVRIRRNFAFVQFETQE+ATKALECT+M
Sbjct: 88  KPTKTLFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKALECTNM 147

Query: 373 SKICGRVVSVEYALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDYGRAHSPV 194
           SKI  RVVSVEYAL                                     DYGR  SPV
Sbjct: 148 SKILDRVVSVEYAL-----RDDGERGDNYDSPRRRGGYERSPSPYHRRPSPDYGRPRSPV 202

Query: 193 YDRYKGPSSNRDRSPDYGRY 134
           YDRY G   +  RSPDYGR+
Sbjct: 203 YDRYNGGGPDMRRSPDYGRH 222


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