BLASTX nr result

ID: Papaver23_contig00023000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00023000
         (482 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [S...    87   2e-15
gb|ADE76954.1| unknown [Picea sitchensis]                              86   3e-15
ref|XP_002330007.1| global transcription factor group [Populus t...    85   5e-15
ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays] gi|752...    85   5e-15
ref|XP_002318930.1| global transcription factor group [Populus t...    84   9e-15

>ref|XP_002466155.1| hypothetical protein SORBIDRAFT_01g002390 [Sorghum bicolor]
            gi|241920009|gb|EER93153.1| hypothetical protein
            SORBIDRAFT_01g002390 [Sorghum bicolor]
          Length = 1054

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 64/172 (37%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
 Frame = -1

Query: 482  DIMFHNVRCAFFQDGDKKTASLCHLHLHNPILVGTETTKDIQF----RTVQQTL-NMRRL 318
            DIMF N++ AFFQ  +K+  +L H HLHN I+VG + TKD+QF      V QTL   RR 
Sbjct: 703  DIMFGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGSRRS 762

Query: 317  VRDSDXXXXXXXXXXXXXEV---IWNFISKVNPICLRSNL----FRFTEVKKKRGFYGEL 159
              D D              +     NF++KVN    +         F    ++ GFYG  
Sbjct: 763  ALDPDEIEEEQRERDRKNRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFYGVP 822

Query: 158  TLEEQLTLPSIFVFTVTCLVQLEHMPFTVVILKEIEIVNLVHAEPGMEMFNM 3
                   +P     T TCLV+L   PF VV L EIEIVNL     G + F+M
Sbjct: 823  YKASAFIIP-----TSTCLVELIENPFLVVSLSEIEIVNLERVGFGTKNFDM 869


>gb|ADE76954.1| unknown [Picea sitchensis]
          Length = 372

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 59/172 (34%), Positives = 88/172 (51%), Gaps = 12/172 (6%)
 Frame = -1

Query: 482 DIMFHNVRCAFFQDGDKKTASLCHLHLHNPILVGTETTKDIQF----RTVQQTL-NMRRL 318
           D+M+ N++ AFFQ  +K+  +L H HLHN I+VGT+ TKD+QF      V QTL   RR 
Sbjct: 24  DVMYQNIKHAFFQPAEKEMITLLHFHLHNHIMVGTKKTKDVQFFVEVMDVVQTLGGARRS 83

Query: 317 VRDSDXXXXXXXXXXXXXEV---IWNFISKVNPICLRSNL----FRFTEVKKKRGFYGEL 159
           + D D             ++      F+ +V+ +  +S+L      F    ++ GF+G  
Sbjct: 84  MYDPDEIEEEQQERDRKNKINAEFQAFVKRVSELWEQSHLKDLELEFDIPFRELGFHGVP 143

Query: 158 TLEEQLTLPSIFVFTVTCLVQLEHMPFTVVILKEIEIVNLVHAEPGMEMFNM 3
                  +P     TV CLV+L  +PF V+ + EIEIVNL     G + F+M
Sbjct: 144 HKASAFIVP-----TVNCLVELIEIPFLVITISEIEIVNLERVGLGQKAFDM 190


>ref|XP_002330007.1| global transcription factor group [Populus trichocarpa]
            gi|222871432|gb|EEF08563.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1065

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
 Frame = -1

Query: 482  DIMFHNVRCAFFQDGDKKTASLCHLHLHNPILVGTETTKDIQF----RTVQQTL-NMRRL 318
            DIMF N++ AFFQ  +K+  +L H HLHN I+VG + TKD+QF      V QTL   +R 
Sbjct: 716  DIMFANIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS 775

Query: 317  VRDSDXXXXXXXXXXXXXEV---IWNFISKVNPICLRSNL----FRFTEVKKKRGFYGEL 159
              D D             ++     +F+++VN +  +         F +  ++ GF+G  
Sbjct: 776  AYDPDEIEEEQRERERKNKINMDFQSFVNRVNDLWAQPQFSGLDLEFDQPLRELGFHG-- 833

Query: 158  TLEEQLTLPSIFVFTVTCLVQLEHMPFTVVILKEIEIVNLVHAEPGMEMFNM 3
             +  ++T  S  V T +CLV+L   PF VV L EIEIVNL     G + F+M
Sbjct: 834  -VPHKVT--SFIVPTSSCLVELVETPFLVVTLSEIEIVNLERVGLGQKNFDM 882


>ref|NP_001105557.1| FACT complex subunit SPT16 [Zea mays]
            gi|75299841|sp|Q8H6B1.1|SPT16_MAIZE RecName: Full=FACT
            complex subunit SPT16; AltName: Full=Facilitates
            chromatin transcription complex subunit SPT16; AltName:
            Full=Global transcription factor group C protein 102
            gi|24021798|gb|AAN41252.1| global transcription factor
            group C 102 [Zea mays] gi|413935251|gb|AFW69802.1| FACT
            complex subunit SPT16 isoform 1 [Zea mays]
            gi|413935252|gb|AFW69803.1| FACT complex subunit SPT16
            isoform 2 [Zea mays]
          Length = 1055

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 63/172 (36%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
 Frame = -1

Query: 482  DIMFHNVRCAFFQDGDKKTASLCHLHLHNPILVGTETTKDIQF----RTVQQTL-NMRRL 318
            DIMF N++ AFFQ  +K+  +L H HLHN I+VG + TKD+QF      V QTL   RR 
Sbjct: 704  DIMFGNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGSRRS 763

Query: 317  VRDSDXXXXXXXXXXXXXEV---IWNFISKVNPICLRSNL----FRFTEVKKKRGFYGEL 159
              D D              +     NF++KVN    +         F    ++ GF+G  
Sbjct: 764  ALDPDEIEEEQRERDRKNRINMDFQNFVNKVNDHWSQPQFKGLDLEFDVPLRELGFHGVP 823

Query: 158  TLEEQLTLPSIFVFTVTCLVQLEHMPFTVVILKEIEIVNLVHAEPGMEMFNM 3
                   +P     T TCLV+L   PF VV L EIEIVNL     G + F+M
Sbjct: 824  YKASAFIIP-----TSTCLVELIETPFLVVSLSEIEIVNLERVGFGTKNFDM 870


>ref|XP_002318930.1| global transcription factor group [Populus trichocarpa]
            gi|222857306|gb|EEE94853.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1082

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 61/172 (35%), Positives = 89/172 (51%), Gaps = 12/172 (6%)
 Frame = -1

Query: 482  DIMFHNVRCAFFQDGDKKTASLCHLHLHNPILVGTETTKDIQF----RTVQQTL-NMRRL 318
            DIMF N++ AFFQ  +K+  +L H HLHN I+VG + TKD+QF      V QTL   +R 
Sbjct: 716  DIMFSNIKHAFFQPAEKEMITLLHFHLHNHIMVGNKKTKDVQFYVEVMDVVQTLGGGKRS 775

Query: 317  VRDSDXXXXXXXXXXXXXEV---IWNFISKVNPICLRSNL----FRFTEVKKKRGFYGEL 159
              D D             ++     +F+++VN +  +         F +  ++ GF+G  
Sbjct: 776  AYDPDEIEEEQRERDRKNKINMDFQSFVNRVNDLWSQPQFSGLDLEFDQPLRELGFHG-- 833

Query: 158  TLEEQLTLPSIFVFTVTCLVQLEHMPFTVVILKEIEIVNLVHAEPGMEMFNM 3
             +  ++T  S  V T +CLV+L   PF VV L EIEIVNL     G + F+M
Sbjct: 834  -VPHKVT--SFIVPTSSCLVELVETPFLVVTLGEIEIVNLERVGLGQKNFDM 882


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