BLASTX nr result

ID: Papaver23_contig00022990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022990
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containin...   213   7e-53
ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containin...   202   1e-49
ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containin...   202   1e-49
ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis] ...   200   6e-49
ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containin...   186   9e-45

>ref|XP_002273438.2| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Vitis vinifera]
          Length = 948

 Score =  213 bits (543), Expect = 7e-53
 Identities = 123/250 (49%), Positives = 147/250 (58%), Gaps = 2/250 (0%)
 Frame = -3

Query: 744 VELNTSFSKTEELSPS-GQXXXXXXXXXXXXXXDRNHKHRRRETRSQSSEKDVPDQPFRR 568
           +EL  S  K   LSPS G+              DRNHKHRRRETRSQS E+D  +Q   R
Sbjct: 1   MELKVSSPKPSGLSPSDGESDPEEKEISDEDDDDRNHKHRRRETRSQSLERDSLEQVLSR 60

Query: 567 QNRKRNRPFDNGHMFGENDPQSSGSQGQYNPTSMVIDQSGRSEKRRLGLAPLPRGNFESN 388
             RKRN+PF+NGH F END QSSGS   YN + M  D SG+ EKRR GLA   R   + N
Sbjct: 61  PYRKRNKPFENGHSFRENDSQSSGSWKNYNISPMEKDFSGKFEKRRPGLATFARAPLDLN 120

Query: 387 QRGRVNQALRGEGGSRTDLSMSLNRLPGGRGRGMTSGLWSQHDPRFTPVGTLDFASQIAA 208
           QR R+NQ+  G+ G               RGRG   G W+Q DPRF+ V   D ASQ+  
Sbjct: 121 QRTRMNQSFSGDSGP-------------VRGRGRDPGSWNQRDPRFSQV---DIASQMVQ 164

Query: 207 QGPTSGLFAGRGLQSAATTQNAPWGAFGLIPGMPNGGLDALHPL-MQGALRAPINPPLNI 31
                GL+AGRGL + + TQNA W  FGL+PG+PNG LD+LH L +QG LR P++  LN 
Sbjct: 165 GSIPPGLYAGRGLPNVSNTQNASWSGFGLLPGIPNGALDSLHSLGLQGTLRPPLSTSLNK 224

Query: 30  GIAHQRCRDF 1
            I  QRCRDF
Sbjct: 225 SIPRQRCRDF 234


>ref|XP_004158351.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Cucumis sativus]
          Length = 800

 Score =  202 bits (515), Expect = 1e-49
 Identities = 112/217 (51%), Positives = 136/217 (62%), Gaps = 2/217 (0%)
 Frame = -3

Query: 645 RNHKHRRRETRSQSSEKDVPDQPFRRQNRKRNRPFDNGHMFGENDPQSSGSQGQYNPTSM 466
           RNHKHRRRETRSQS E+D  +   R    KR++PF+NG  F +ND Q++ +   +N  ++
Sbjct: 33  RNHKHRRRETRSQSLERDAREHVLRPYG-KRSKPFENGRSFRDNDSQANEAWKSFNAPTL 91

Query: 465 VIDQSGRSEKRRLGLAPLPRGNFESNQRGRVNQALRGEGGSRTDLSMSLNRLPGGRGRGM 286
             D  G+ +KRRLG  P PR   + NQR R NQA  G+             L  GRGRG 
Sbjct: 92  EKDTPGKFDKRRLGAVPGPRVVGDFNQRIRGNQAFSGD-------------LSSGRGRGR 138

Query: 285 TSGLWSQHDPRFTPVGTLDFASQIAAQGP-TSGLFAGRGLQSAATTQNAPWGAFGLIPGM 109
            SG W+Q D RF+PV   D ASQI   G     LFAGRGL S +T Q APW AFGLI G+
Sbjct: 139 DSGTWNQFDSRFSPV---DIASQIVHHGSFPPSLFAGRGLPSVSTAQTAPWNAFGLISGI 195

Query: 108 PNGGLDALHPL-MQGALRAPINPPLNIGIAHQRCRDF 1
           PN GL+ +HP+ +QG LR PINPPLNIGI  QRCRDF
Sbjct: 196 PNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDF 232


>ref|XP_004141194.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Cucumis sativus]
          Length = 901

 Score =  202 bits (515), Expect = 1e-49
 Identities = 112/217 (51%), Positives = 136/217 (62%), Gaps = 2/217 (0%)
 Frame = -3

Query: 645 RNHKHRRRETRSQSSEKDVPDQPFRRQNRKRNRPFDNGHMFGENDPQSSGSQGQYNPTSM 466
           RNHKHRRRETRSQS E+D  +   R    KR++PF+NG  F +ND Q++ +   +N  ++
Sbjct: 33  RNHKHRRRETRSQSLERDAREHVLRPYG-KRSKPFENGRSFRDNDSQANEAWKSFNAPTL 91

Query: 465 VIDQSGRSEKRRLGLAPLPRGNFESNQRGRVNQALRGEGGSRTDLSMSLNRLPGGRGRGM 286
             D  G+ +KRRLG  P PR   + NQR R NQA  G+             L  GRGRG 
Sbjct: 92  EKDTPGKFDKRRLGAVPGPRVVGDFNQRIRGNQAFSGD-------------LSSGRGRGR 138

Query: 285 TSGLWSQHDPRFTPVGTLDFASQIAAQGP-TSGLFAGRGLQSAATTQNAPWGAFGLIPGM 109
            SG W+Q D RF+PV   D ASQI   G     LFAGRGL S +T Q APW AFGLI G+
Sbjct: 139 DSGTWNQFDSRFSPV---DIASQIVHHGSFPPSLFAGRGLPSVSTAQTAPWNAFGLISGI 195

Query: 108 PNGGLDALHPL-MQGALRAPINPPLNIGIAHQRCRDF 1
           PN GL+ +HP+ +QG LR PINPPLNIGI  QRCRDF
Sbjct: 196 PNSGLETMHPIGLQGTLRPPINPPLNIGIPRQRCRDF 232


>ref|XP_002524655.1| rrm/rnp domain, putative [Ricinus communis]
           gi|223536016|gb|EEF37674.1| rrm/rnp domain, putative
           [Ricinus communis]
          Length = 972

 Score =  200 bits (509), Expect = 6e-49
 Identities = 113/217 (52%), Positives = 136/217 (62%), Gaps = 2/217 (0%)
 Frame = -3

Query: 645 RNHKHRRRETRSQSSEKDVPDQPFRRQNRKRNRPFDNGHMFGENDPQSSGSQGQYNPTSM 466
           RNHKHRRRETRSQS+E+D  +  F R  RKRN+PF+NGH F EN+ Q S +    N   +
Sbjct: 35  RNHKHRRRETRSQSTERDSLEPIFTRSYRKRNKPFENGHPFRENESQGSETWKNSNIAPL 94

Query: 465 VIDQSGRSEKRRLGLAPLPRGNFESNQRGRVNQALRGEGGSRTDLSMSLNRLPGGRGRGM 286
             D   + +KRR G+A  PR N + NQR R NQ   GE G              GRGRG 
Sbjct: 95  EKDFI-KFDKRRPGMASFPRMNVDLNQRIRSNQIFFGEPGP-------------GRGRGR 140

Query: 285 TSGLWSQHDPRFTPVGTLDFASQIAAQGP-TSGLFAGRGLQSAATTQNAPWGAFGLIPGM 109
            SG W+Q D RF+ V   D ASQ+  QG  T GLFAGRGL + + TQN+ W  FGLIPG+
Sbjct: 141 DSGSWNQRDSRFSSV---DIASQMVQQGSITPGLFAGRGLPNVSNTQNSSWNTFGLIPGI 197

Query: 108 PNGGLDALHPL-MQGALRAPINPPLNIGIAHQRCRDF 1
           P+GGLD LHP+ +QG LR  +N  LNIGI  QRCRDF
Sbjct: 198 PSGGLDTLHPIGLQGTLRPAVNSSLNIGIPRQRCRDF 234


>ref|XP_003524556.1| PREDICTED: zinc finger CCCH domain-containing protein 41-like
           [Glycine max]
          Length = 922

 Score =  186 bits (473), Expect = 9e-45
 Identities = 110/251 (43%), Positives = 143/251 (56%), Gaps = 3/251 (1%)
 Frame = -3

Query: 744 VELNTSFSKTEELSPSGQXXXXXXXXXXXXXXD-RNHKHRRRETRSQSSEKDVPDQPFRR 568
           +EL  S  K E ++PS +              D RNHKHRRRETRSQS E+DV D    R
Sbjct: 1   MELKVSSPKPESVAPSDRASDPEEKEVSDDDDDDRNHKHRRRETRSQSLERDVSDPVISR 60

Query: 567 QNRKRNRPFDNGHMFGENDPQSSGSQGQYNPTSMVIDQSGRSEKRRLGLAPLPRGNFESN 388
             +KRN+ F N H F EN+ Q+  +   Y+  +   +   + ++RR GLA  PR   + +
Sbjct: 61  SFKKRNKNFGNRHPFRENESQAFETLKTYSDATTDKEFYFKFDRRRPGLASAPRTPLDMS 120

Query: 387 QRGRVNQALRGEGGSRTDLSMSLNRLPGGRGRGMTSGLWSQHDPRFTPVGTLDFASQIAA 208
           QR R NQ+  G+ G              GRGRG  SG W+Q + RF   G++D ASQ+  
Sbjct: 121 QRLRANQSFTGDPGV-------------GRGRGRESGFWNQRESRF---GSMDVASQMVP 164

Query: 207 QGP-TSGLFAGRGLQSAATTQNAPWGAFGLIPGMPNGGLDALHPL-MQGALRAPINPPLN 34
           QG     L+AGRGL + +  QNA W  FGLIP +PNGGLD LHP+ +QG LRAPI+  LN
Sbjct: 165 QGSIPPSLYAGRGLPNVSNAQNAAWNTFGLIPAVPNGGLDMLHPMGLQGTLRAPISSSLN 224

Query: 33  IGIAHQRCRDF 1
           + I  QRCRDF
Sbjct: 225 VNIPRQRCRDF 235


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