BLASTX nr result

ID: Papaver23_contig00022940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022940
         (524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30062.3| unnamed protein product [Vitis vinifera]              158   4e-37
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   158   4e-37
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   158   4e-37
gb|AFN53638.1| hypothetical protein [Linum usitatissimum]             151   5e-35
ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   151   6e-35

>emb|CBI30062.3| unnamed protein product [Vitis vinifera]
          Length = 385

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/93 (80%), Positives = 84/93 (90%)
 Frame = +2

Query: 2   SLYIIPAHSNLISQVKFDPQEGYFLATASYDMTAKLWSARDFKPIKTLSGHESKVSSLDI 181
           SLY+IPAHSNL+SQVKF+PQEGYFL TASYDMTAK+WSARDFKP+KTLSGHE+KV+SLDI
Sbjct: 293 SLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDI 352

Query: 182 VGDGQYIATVSHDRTIKLWASRSNGKDKAMDID 280
             DG  IATVSHDRTIKLW+S    K+KAMDID
Sbjct: 353 TEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 385


>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Vitis vinifera]
          Length = 577

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/93 (80%), Positives = 84/93 (90%)
 Frame = +2

Query: 2   SLYIIPAHSNLISQVKFDPQEGYFLATASYDMTAKLWSARDFKPIKTLSGHESKVSSLDI 181
           SLY+IPAHSNL+SQVKF+PQEGYFL TASYDMTAK+WSARDFKP+KTLSGHE+KV+SLDI
Sbjct: 485 SLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDI 544

Query: 182 VGDGQYIATVSHDRTIKLWASRSNGKDKAMDID 280
             DG  IATVSHDRTIKLW+S    K+KAMDID
Sbjct: 545 TEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 577


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  158 bits (400), Expect = 4e-37
 Identities = 75/93 (80%), Positives = 84/93 (90%)
 Frame = +2

Query: 2    SLYIIPAHSNLISQVKFDPQEGYFLATASYDMTAKLWSARDFKPIKTLSGHESKVSSLDI 181
            SLY+IPAHSNL+SQVKF+PQEGYFL TASYDMTAK+WSARDFKP+KTLSGHE+KV+SLDI
Sbjct: 996  SLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKTLSGHEAKVTSLDI 1055

Query: 182  VGDGQYIATVSHDRTIKLWASRSNGKDKAMDID 280
              DG  IATVSHDRTIKLW+S    K+KAMDID
Sbjct: 1056 TEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 1088


>gb|AFN53638.1| hypothetical protein [Linum usitatissimum]
          Length = 685

 Score =  151 bits (382), Expect = 5e-35
 Identities = 70/93 (75%), Positives = 85/93 (91%)
 Frame = +2

Query: 2   SLYIIPAHSNLISQVKFDPQEGYFLATASYDMTAKLWSARDFKPIKTLSGHESKVSSLDI 181
           SLY+IPAHSNL+S VK++PQEGY+L TASYD TAK+WS +DFKP+KTLSGHESKV+SLDI
Sbjct: 583 SLYVIPAHSNLVSHVKYEPQEGYYLVTASYDTTAKVWSGKDFKPVKTLSGHESKVASLDI 642

Query: 182 VGDGQYIATVSHDRTIKLWASRSNGKDKAMDID 280
             DG+YIATVSHDRTIKLW+SRS+ K+ +MD+D
Sbjct: 643 APDGRYIATVSHDRTIKLWSSRSDEKE-SMDVD 674


>ref|XP_004162536.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Cucumis sativus]
          Length = 568

 Score =  151 bits (381), Expect = 6e-35
 Identities = 73/94 (77%), Positives = 85/94 (90%), Gaps = 1/94 (1%)
 Frame = +2

Query: 2   SLYIIPAHSNLISQVKFDPQEGYFLATASYDMTAKLWSARDFKPIKTLSGHESKVSSLDI 181
           SLYIIPAHSNL+SQVK++PQEGYFL TAS+DMTAK+WSARDFKP+KTLSGHE+KV+SLDI
Sbjct: 477 SLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDI 536

Query: 182 VGDGQYIATVSHDRTIKLWASRSNGKD-KAMDID 280
           + DGQ IATVSHDRTIKLW+   N KD + MD+D
Sbjct: 537 ISDGQCIATVSHDRTIKLWS--VNSKDIQTMDVD 568


Top