BLASTX nr result

ID: Papaver23_contig00022896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022896
         (1662 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold ...    81   3e-16
ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355...    82   3e-13
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...    82   4e-13
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia...    80   2e-12
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              73   2e-12

>gb|ABN08723.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
            truncatula]
          Length = 355

 Score = 81.3 bits (199), Expect(2) = 3e-16
 Identities = 72/280 (25%), Positives = 123/280 (43%), Gaps = 6/280 (2%)
 Frame = -2

Query: 1109 TTKSTYNHLCNINSIPSAYSFNTRFWLKFWKLHIPYKLQIFLWKLIHNALPIKANLHHSD 930
            T KS Y  +C+    P   + N   W+  W L+IP++++ FLW+L HN LP + NL+   
Sbjct: 91   TVKSAYR-ICSDLLHPHDSAHNNSSWMNIWNLNIPHRVRAFLWRLAHNCLPTRVNLNARG 149

Query: 929  I-IERSCILCNCSYIENINHLFFECSFAKAIWKACLPQHYHYIHQFQTLNDWFTS-WTSL 756
            I  E SC++   ++ E   HLFF C+ A   WK  +  H          N++ T  +  +
Sbjct: 150  IQCEESCVMFE-NFAECHTHLFFVCAKAMDCWKN-IGLHVVLSELLPLANNFTTLLFDFM 207

Query: 755  DAAISFSSEAPSIHTISAILWHIRKFRCQVIFQHATVNVNFVLYPLFKYLTDIANIVSAS 576
                S   +A  +     +LW + K R   ++          +      L + + + SA 
Sbjct: 208  HRLCSQQQQAAGM-----LLWSLWKSRNIKLWDSTDTTTAITISRAKDTLHEWSCMQSAK 262

Query: 575  HLTRHFRHPVGHVYHWNHWNPSPPHTLKMNVDASFGKCFYLAGIAMILRNSTRAFIAGKG 396
                    P+   +H + W       +K N+DA+  +    AG  +  RNS    + GK 
Sbjct: 263  ------TQPINPNHHIS-WVKPTGGMIKCNMDAAIFQNNVAAGYGICCRNSEDELLLGK- 314

Query: 395  MLKRVVHAN----QAETWALLEAMSWAAYQKWNRVIFESD 288
                ++H++    +AE   LLEAM  +    ++ V +E+D
Sbjct: 315  --SAIIHSSLSVLEAEAIVLLEAMKLSISSGFHHVYYETD 352



 Score = 31.6 bits (70), Expect(2) = 3e-16
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 1230 WNIPLLHKLFTPLQVNSILTI-LIDLQCEDTLVWPLTSTGNH 1108
            WN  ++  +F P    +IL+I L +    DT +W  T+TGN+
Sbjct: 49   WNQQIVTSIFNPQDAAAILSIPLHNRLLSDTRIWKTTTTGNY 90


>ref|XP_003629388.1| Cytochrome P450 [Medicago truncatula] gi|355523410|gb|AET03864.1|
            Cytochrome P450 [Medicago truncatula]
          Length = 687

 Score = 82.4 bits (202), Expect = 3e-13
 Identities = 78/292 (26%), Positives = 116/292 (39%), Gaps = 22/292 (7%)
 Frame = -2

Query: 1034 WLKFWKLHIPYKLQIFLWKLIHNALPIKANLHHSDI--IERSCILCNCSYIENINHLFFE 861
            W   W+L +P K++ FLW+   N LP +  L    +  I+R C +C+  + E+ NHLFF 
Sbjct: 366  WNYIWRLKLPPKVKNFLWRACRNCLPTRIRLQSKGVQCIDR-CAVCD-DFGEDSNHLFFM 423

Query: 860  CSFAKAIWKACLPQHYHYIHQFQTLNDWFTSWTSLDAAISFSSEAPSI---------HTI 708
            CS +   W              Q +  W       D  +SF +   +I            
Sbjct: 424  CSKSMLYW--------------QRIGLWSPLMAVFDINVSFPTNVFAILQHLDQQQKQIF 469

Query: 707  SAILWHIRKFRCQVIFQHATVNVNFVLYPLFKYLTDIANIVSASHLTRHFRHPVGHVYHW 528
            S  LW I K R   ++ + T     +       LT   N        ++ RHP       
Sbjct: 470  SVTLWSIWKHRNNKVWNNITDTAQDICARAGSLLTSWRN-------AQNIRHP------- 515

Query: 527  NHWNPSPPHTLK----------MNVDASFGKCFYLAGIAMILRNSTRAFIAGK-GMLKRV 381
            +  NPS P+ LK           NVDASF +     GI + +R+    F+  K   +  +
Sbjct: 516  SPQNPSTPNDLKWVKPSPGRFTCNVDASFSQARNRVGIGVCIRDEEGRFVLAKTEWMTPL 575

Query: 380  VHANQAETWALLEAMSWAAYQKWNRVIFESDCKNIVLYCNCRFTSTSLAINF 225
            +     E   LL AM W    +   V FE D K++V   +  + STS   NF
Sbjct: 576  LDVELGEALGLLSAMHWVRDLQLGIVDFELDSKSVV---DSLYGSTSGVSNF 624


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223538337|gb|EEF39944.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 483

 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 75/269 (27%), Positives = 122/269 (45%), Gaps = 7/269 (2%)
 Frame = -2

Query: 1055 YSFNTRFWLKFWKLHIPYKLQIFLWKLIHNALPIKANLHHSDIIERSCILCNCSYIENIN 876
            Y  N   W + WKL+I  K ++F+W+ + N LP++ NL    + E S   C  S  E I 
Sbjct: 177  YPSNVVVWRRLWKLNIAAKCKVFMWRALTNRLPVRTNLVMRKVTEDSSCPCCVSQPETIM 236

Query: 875  HLFFECSFAKAIWKACLPQHYHYIHQFQTLNDWFTS-WTSLDAAI--SFSSEAPSIHT-I 708
            H+   C      WK      Y ++ Q   L +   S +   D +I  SF     S+ T +
Sbjct: 237  HILVLCDVTTQSWK--YVNLYQFLSQVSNLLEGARSVFEHFDDSIVASFVVLWWSLWTNM 294

Query: 707  SAILWHIRKFRCQVIFQHATVNVNFVL-YPLFKYLTDIANIVSASHLTRHFRHPVGHVYH 531
            + ++W+ +K   + +   A+   +F+  +   + LTD         L RHF    G    
Sbjct: 295  NDVVWNGKKLSWRAVASRAS---SFLFQWGKARKLTDY------HQLGRHFAG--GDCL- 342

Query: 530  WNHWNPSPPHTLKMNVDASFGKCFYLAGIAMILRNSTRAFIAGKGMLK-RVVHANQAETW 354
               W        K+NVDAS       +G + +LR++   +I G  +++  + + + AE W
Sbjct: 343  ---WQKPATGKYKLNVDASSSAERGKSGASFVLRDNAGIWITGVLIIRPYIANPDVAEAW 399

Query: 353  ALLEAMSWAAYQKWNRVIFESDC-KNIVL 270
            AL EA+SW   +    V  E+DC +NI L
Sbjct: 400  ALKEALSWIHAKGMEEVQIETDCLRNIEL 428


>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
            gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
            protein [Arabidopsis thaliana]
            gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
            [Arabidopsis thaliana]
          Length = 343

 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 66/261 (25%), Positives = 113/261 (43%), Gaps = 10/261 (3%)
 Frame = -2

Query: 1028 KFWKLHIPYKLQIFLWKLIHNALPIKANLHHSDIIER-SCILCNCSYIENINHLFFECSF 852
            K WKL    K++ FLWKL+  AL    NL    I     C  C C   E   HLFF+C +
Sbjct: 17   KIWKLKTAPKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRC-CQEDETSQHLFFDCFY 75

Query: 851  AKAIWKACLPQHYHYIHQFQTLNDWFTSWTSLDAAISFSSEAPSIHTISA-ILWHIRKFR 675
            A+ +W+A    H     + +T      +   L  +   ++  P +  ++  ILW + K R
Sbjct: 76   AQQVWRASGIPH----QELRTTGITMETKMELLLSSCLANRQPQLFNLAIWILWRLWKSR 131

Query: 674  CQVIFQHATVNVNFVLYPLFKYL-------TDIANIVSASHLTRHFRHPVGHVYHWNHWN 516
             Q++FQ  +++    L      +       T + ++    H +RH +  +        W 
Sbjct: 132  NQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQVHSSRHQQPTMAR----TKWQ 187

Query: 515  PSPPHTLKMNVDASFGKCFYLAGIAMILRNSTRAFI-AGKGMLKRVVHANQAETWALLEA 339
              P   +K N D +F      A    ++R+    ++ +G+ +      + ++E  AL+ A
Sbjct: 188  RPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIA 247

Query: 338  MSWAAYQKWNRVIFESDCKNI 276
            M  A  Q + +VIFE D K +
Sbjct: 248  MQHAWSQGYRKVIFEGDSKQV 268


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 72.8 bits (177), Expect(2) = 2e-12
 Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 10/276 (3%)
 Frame = -2

Query: 1070 SIPSAYSF--------NTRFWLKFWKLHIPYKLQIFLWKLIHNALPIKANLHHSDIIER- 918
            ++ SAYS          +  W+  W+     K+++F+WK++ N L +        + +  
Sbjct: 1019 TVSSAYSLIAGHDGDDRSHDWI--WRATCTEKIKLFMWKIVKNGLMVNVERKRRGLADAA 1076

Query: 917  SCILCNCSYIENINHLFFECSFAKAIWKACLPQHYHYIHQFQTLNDWFTSWTSLDAAISF 738
            SC +C     E ++HLF  C  A+A W + +P           ++ W  +  S      +
Sbjct: 1077 SCPVCG-EEDETLDHLFRRCLLAEACWDSAVPPLTFQTSNHLHMHSWMKAACSSQQKDGY 1135

Query: 737  SSEAPSIHTISAILWHIRKFRCQVIFQHATVNVNFVLYPLFKYLTDIANIVSA-SHLTRH 561
            S+    I     ILW++ K R +++F +     + +L   F   ++   +++  + L   
Sbjct: 1136 STNWSLIFPY--ILWNLWKARNRLVFDNNITAPSDILNRSFMESSEARCLLAKRTGLQTA 1193

Query: 560  FRHPVGHVYHWNHWNPSPPHTLKMNVDASFGKCFYLAGIAMILRNSTRAFIAGKGMLKRV 381
            F+        W  W+P      K+N D +     +LA    +LRN    ++AG       
Sbjct: 1194 FQT-------WVVWSPPAAGFTKLNSDGACKSHSHLASAGGLLRNENGLWVAGYTCNIGT 1246

Query: 380  VHANQAETWALLEAMSWAAYQKWNRVIFESDCKNIV 273
             ++  AE W L E +  A  + + ++I E+D + +V
Sbjct: 1247 ANSFLAELWGLREGLLLAKNRGFTKLIAETDSEAVV 1282



 Score = 27.3 bits (59), Expect(2) = 2e-12
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = -1

Query: 1260 VGPMISGTSQWNIPLLHKLFTPLQVNSILT--ILIDLQCEDTLVWPLTSTG 1114
            V  +I+   +W+   LH +     ++ +    I I+ + ED L WP ++TG
Sbjct: 966  VEDLITSQRRWDTGALHNILPTNMIDMVRATPIAINSEQEDFLSWPHSTTG 1016


Top