BLASTX nr result

ID: Papaver23_contig00022878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022878
         (1296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534335.1| RNA binding protein, putative [Ricinus commu...   350   5e-94
ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containin...   345   2e-92
ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|2...   322   1e-85
ref|XP_002529054.1| RNA binding protein, putative [Ricinus commu...   296   1e-77
ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containin...   254   3e-65

>ref|XP_002534335.1| RNA binding protein, putative [Ricinus communis]
            gi|223525472|gb|EEF28048.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 578

 Score =  350 bits (898), Expect = 5e-94
 Identities = 196/349 (56%), Positives = 227/349 (65%), Gaps = 14/349 (4%)
 Frame = +3

Query: 285  MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 464
            MD +ES  +V+NRIQKLEPEN SKIIGYLL+Q+HS+REMIRLAF PDNLI SLITKAK+ 
Sbjct: 1    MDFTESTKVVYNRIQKLEPENVSKIIGYLLLQDHSEREMIRLAFSPDNLIYSLITKAKSD 60

Query: 465  LRSPKQ-LSPQISPTMSSES-VSDFSL-FTXXXXXXXXXXXXXXXXXXXXX-YWDQQVIV 632
            L   K  LS  ISP+  + S VSD  L FT                      YWD QV  
Sbjct: 61   LGLNKPALSAPISPSQVNTSPVSDIPLQFTPFSPASAHPISSPAASRRTASAYWDAQVTG 120

Query: 633  DQQSIRNMDFNPQNCSDLVADDYHFPNQTQFLSXXXXXXXXXXXXXQ--------ESALG 788
            DQQ + N+DF     SD V +DY   N  QFL+                      E ALG
Sbjct: 121  DQQQVPNLDFGSPGYSDTVPEDYRLQNHMQFLTLDDQFEFAHSVNSDFSSNYFYSEPALG 180

Query: 789  NLNSRVSRRSGSLPEFPLKICHYFNKGFCKHGSSCRYFHGQPLQDSFSHILN--GGELLR 962
                R +RRS SLPEFPLKICHYF+KG+CKHG++CRY HG P+ + FS I +    +   
Sbjct: 181  ---PRTNRRSPSLPEFPLKICHYFSKGYCKHGNNCRYVHGHPMPEGFSQIFSTKSNDFSN 237

Query: 963  EENVMSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGK 1142
            +E+V+SPGS            +SRRG+PVSIASLPMMYYEKYG+ LQAEGYLTESQRHGK
Sbjct: 238  DEHVVSPGSLEKLEMELAELLKSRRGMPVSIASLPMMYYEKYGKTLQAEGYLTESQRHGK 297

Query: 1143 AGYSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGG 1289
            AGYSLTKLLARLKNSIR+IDRPHGQHSV+L ED P Y+EY GE  D GG
Sbjct: 298  AGYSLTKLLARLKNSIRVIDRPHGQHSVILEEDVPKYLEYVGERNDPGG 346


>ref|XP_002270665.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like [Vitis
            vinifera]
          Length = 572

 Score =  345 bits (884), Expect = 2e-92
 Identities = 194/344 (56%), Positives = 221/344 (64%), Gaps = 10/344 (2%)
 Frame = +3

Query: 285  MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 464
            MD SES  +V+NRIQKLEPEN SKIIGYLL+Q+H +R+MIR AF  DN I  LI KAK  
Sbjct: 1    MDFSESTKVVYNRIQKLEPENVSKIIGYLLLQDHGERDMIRRAFTSDNAIQCLINKAKAE 60

Query: 465  L---RSPKQLSPQISPTMSSESVSDFSL-FTXXXXXXXXXXXXXXXXXXXXXYWDQQVIV 632
            L     P   SP   P ++   VSD  L FT                     YWD QV  
Sbjct: 61   LGLSSKPAVSSPISPPQVNPSPVSDLPLQFTPFSPASARPFPSPRPGNS---YWDPQVNG 117

Query: 633  DQQSIRNM-DFNPQNCSDLVADDYHFPNQTQFLSXXXXXXXXXXXXXQES---ALGNLNS 800
            DQQ +  + DF PQ  SD + DD+   +Q  FL+               S   A   LN+
Sbjct: 118  DQQQVHKLGDFVPQGYSDSLPDDFRLQSQIHFLAMEDQLENSVGSEFSGSYYYAEQALNT 177

Query: 801  RVSRRSGSLPEFPLKICHYFNKGFCKHGSSCRYFHGQPLQDSFSHILNGG--ELLREENV 974
            R+SRRS SLPEFPLK+CHYFNKGFCKHG+SCRYFHG P+ +SFS I + G  EL  +++V
Sbjct: 178  RISRRSPSLPEFPLKVCHYFNKGFCKHGNSCRYFHGHPMLESFSQIFSPGANELPNDDHV 237

Query: 975  MSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAGYS 1154
              PGS            +SRRG PVSIASLPMMYYEKYGR LQAEGYLTESQRHGKAGYS
Sbjct: 238  FPPGSLEKLELELTELLKSRRGCPVSIASLPMMYYEKYGRTLQAEGYLTESQRHGKAGYS 297

Query: 1155 LTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSG 1286
            LTKLLARLKNSIRLIDRPHGQHSV+LAED P YME  GE +D G
Sbjct: 298  LTKLLARLKNSIRLIDRPHGQHSVILAEDLPKYMEVNGERSDPG 341


>ref|XP_002320513.1| predicted protein [Populus trichocarpa] gi|222861286|gb|EEE98828.1|
            predicted protein [Populus trichocarpa]
          Length = 554

 Score =  322 bits (826), Expect = 1e-85
 Identities = 184/345 (53%), Positives = 213/345 (61%), Gaps = 10/345 (2%)
 Frame = +3

Query: 285  MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 464
            MD SES  +V+NRIQ++EPE   KIIGY+L+Q H +REMIRLAF PDNLI + I+KAK+ 
Sbjct: 1    MDFSESTKVVYNRIQEIEPEFVGKIIGYILLQNHGEREMIRLAFSPDNLIYATISKAKSD 60

Query: 465  LRSPKQLSPQ-ISPTMSSES-VSDFSL-FTXXXXXXXXXXXXXXXXXXXXXYWDQQVIVD 635
            L   K   P  ISP+  + + VSD  L F                      +WD QV   
Sbjct: 61   LGLNKTPVPNPISPSQVNPAPVSDVHLQFIPNTAVSSHPISSPIKIRTAGSFWDAQVT-- 118

Query: 636  QQSIRNMDFNPQNCSDLVADDYHFPNQTQFLSXXXXXXXXXXXXXQ-----ESALGNLNS 800
                                DY   NQ QFL+                   E ALG    
Sbjct: 119  --------------------DYRLQNQMQFLTSDDQLEFVNSDFSSSYFYPEPALG---P 155

Query: 801  RVSRRSGSLPEFPLKICHYFNKGFCKHGSSCRYFHGQPLQDSFSHIL--NGGELLREENV 974
            R SRRS SLPEFP+KICHYFNKGFCKHG++CRYFHG P+ +SFS IL  N  E+  +E+ 
Sbjct: 156  RTSRRSPSLPEFPVKICHYFNKGFCKHGNNCRYFHGHPMPESFSQILSLNSNEIANDEHF 215

Query: 975  MSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAGYS 1154
            +SPGS            +SRRG+PVSIASLPMMYYEKYGR+LQAEGYLTESQRHGKAGYS
Sbjct: 216  ISPGSLEKLELELTELLKSRRGVPVSIASLPMMYYEKYGRMLQAEGYLTESQRHGKAGYS 275

Query: 1155 LTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSGG 1289
            LTKLLARLKNSIRLIDRPHGQHSV+L ED P Y+EY GE  D GG
Sbjct: 276  LTKLLARLKNSIRLIDRPHGQHSVILTEDVPKYLEYAGERNDPGG 320


>ref|XP_002529054.1| RNA binding protein, putative [Ricinus communis]
            gi|223531534|gb|EEF33365.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 551

 Score =  296 bits (757), Expect = 1e-77
 Identities = 170/346 (49%), Positives = 211/346 (60%), Gaps = 12/346 (3%)
 Frame = +3

Query: 285  MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 464
            MD SE   +VFN+I+K+EPEN +KIIGYLL+Q+ SD+EMI LA  PD +I  +I KAK  
Sbjct: 1    MDFSEHTRVVFNKIKKIEPENVTKIIGYLLLQDGSDQEMINLAMSPDVVIQDVIYKAKAE 60

Query: 465  LR--SPKQLSPQISPTMSSE-SVSDFSL-FTXXXXXXXXXXXXXXXXXXXXXYWDQQVIV 632
            L   + K  +  +SP+M+S  +VS+FS  F                      YW+ QV  
Sbjct: 61   LNQLALKSAATPLSPSMNSPPAVSEFSSQFRAFSPVSSRSYLSPQHFRVPSTYWESQVAS 120

Query: 633  DQQSIRNMDFNPQNCSDLVADDYHFPNQTQFLSXXXXXXXXXXXXX--------QESALG 788
               S    DF P    D + +     NQ QFLS                      ++ALG
Sbjct: 121  KHSS----DFVPMTYQDSMTE---LQNQAQFLSLEDQLESVNLGNAGFPSDLFYSDAALG 173

Query: 789  NLNSRVSRRSGSLPEFPLKICHYFNKGFCKHGSSCRYFHGQPLQDSFSHILNGGELLREE 968
            +  +R  RR  SL E  +KICHYFNKG+CKHGS+CRYFHGQ + DSF    +    + E+
Sbjct: 174  SFRARAGRRYSSLNENSMKICHYFNKGYCKHGSNCRYFHGQ-ISDSFPRTFDA---INED 229

Query: 969  NVMSPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAG 1148
             + SPGS            +SR+G PVSIASLPM+YYEKYG++LQA+GYLTESQRHGKAG
Sbjct: 230  QIFSPGSLEKLELEIIELLKSRKGNPVSIASLPMLYYEKYGKVLQADGYLTESQRHGKAG 289

Query: 1149 YSLTKLLARLKNSIRLIDRPHGQHSVVLAEDAPNYMEYRGEMTDSG 1286
            YSLTKLLARLKNSIRLIDRPHGQH+V+LAED P YME RG+  D G
Sbjct: 290  YSLTKLLARLKNSIRLIDRPHGQHAVILAEDVPKYMENRGDRNDPG 335


>ref|XP_003532163.1| PREDICTED: zinc finger CCCH domain-containing protein 18-like
            [Glycine max]
          Length = 555

 Score =  254 bits (650), Expect = 3e-65
 Identities = 142/332 (42%), Positives = 193/332 (58%), Gaps = 9/332 (2%)
 Frame = +3

Query: 285  MDLSESMIIVFNRIQKLEPENASKIIGYLLVQEHSDREMIRLAFGPDNLILSLITKAKNV 464
            MD+SE   IVF+++ + EPENA+KIIGYLL+Q+H +++M++LA  PD+LI  +  KA+  
Sbjct: 1    MDISEYTRIVFDKLHRFEPENATKIIGYLLLQDHGEQDMVKLASLPDHLIRDVAYKARTE 60

Query: 465  LR---SPKQLSPQISPTMSSESVSDFSLFTXXXXXXXXXXXXXXXXXXXXXYWDQQVIVD 635
            L+   S   + P   PT S + +S  S+ +                     YWD Q    
Sbjct: 61   LQRLASRSAIQPISLPTNSQQCLSHLSVISPTSVITPGTLTSPASFQVQSPYWDPQ---- 116

Query: 636  QQSIRNMDFNPQNCSDLVADD------YHFPNQTQFLSXXXXXXXXXXXXXQESALGNLN 797
              S  N +F      D +++       +   N    ++               S+  NL 
Sbjct: 117  SASNTNAEFMALGYVDSISELQKQTPLFSLENHMDTMNSGTAGIANDYYGLDASSASNLG 176

Query: 798  SRVSRRSGSLPEFPLKICHYFNKGFCKHGSSCRYFHGQPLQDSFSHILNGGELLREENVM 977
             +  R      EFP+K CHYFNKGFCKHG+SCRY+H Q   D FSH+  G ++  ++ V+
Sbjct: 177  GKNGRF-----EFPVKTCHYFNKGFCKHGNSCRYYHEQGAPDMFSHMY-GNDIFNDDQVI 230

Query: 978  SPGSXXXXXXXXXXXXRSRRGLPVSIASLPMMYYEKYGRILQAEGYLTESQRHGKAGYSL 1157
            SPGS            + ++G  +SIASLPM YY++Y ++LQA+GYLTESQRHGK+GYSL
Sbjct: 231  SPGSLAQLESEIVELLKLKKGGSISIASLPMAYYDRYKKVLQADGYLTESQRHGKSGYSL 290

Query: 1158 TKLLARLKNSIRLIDRPHGQHSVVLAEDAPNY 1253
            TKLLARLKNSIRLIDRPHGQHSVVLAEDAP +
Sbjct: 291  TKLLARLKNSIRLIDRPHGQHSVVLAEDAPKF 322


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