BLASTX nr result

ID: Papaver23_contig00022846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00022846
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   182   5e-44
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   181   1e-43
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              176   5e-42
ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   174   1e-41

>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  182 bits (462), Expect = 5e-44
 Identities = 99/184 (53%), Positives = 116/184 (63%)
 Frame = +3

Query: 3    RNLGDKQFFFVNGRPVDMPKVSKLVNELYKTSSSKQYPIIVMNFIVPTRVYDVNVTPDKR 182
            R LGD+QFFFVNGRPVDMPKV KLVNELYK ++S+QYPI +MNF VPTR YDVNVTPDKR
Sbjct: 2961 RTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKR 3020

Query: 183  KIFFSDEGSLMRSLRESIEKIYSPSHCSYSTNKVEEHQKEGNGLNLCHHQEIPTLPLKRI 362
            KIFFSDEGS++ SLRE +EKIYSPS  SYS N+ EE  +E +   L   Q       K++
Sbjct: 3021 KIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETBNSELNPPQTQILXSSKQL 3080

Query: 363  PSKVYSNNEAECSEVQVVEDDSPIKTVKKRIPVSDVEEGMVQIEGEKPSRKDFTLRAHAF 542
                    E   SE Q+ ED  P K VK         + M     +    KDF+LR H  
Sbjct: 3081 FPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHSYDKDSIEKDFSLRVHGI 3140

Query: 543  GKAD 554
             KAD
Sbjct: 3141 KKAD 3144


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  181 bits (458), Expect = 1e-43
 Identities = 99/184 (53%), Positives = 116/184 (63%)
 Frame = +3

Query: 3   RNLGDKQFFFVNGRPVDMPKVSKLVNELYKTSSSKQYPIIVMNFIVPTRVYDVNVTPDKR 182
           R LGD+QFFFVNGRPVDMPKV KLVNELYK ++S+QYPI +MNF VPTR YDVNVTPDKR
Sbjct: 262 RTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKR 321

Query: 183 KIFFSDEGSLMRSLRESIEKIYSPSHCSYSTNKVEEHQKEGNGLNLCHHQEIPTLPLKRI 362
           KIFFSDEGS++ SLRE +EKIYSPS  SYS N+ EE  +E +   L   Q       K++
Sbjct: 322 KIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNPPQTQILSSSKQL 381

Query: 363 PSKVYSNNEAECSEVQVVEDDSPIKTVKKRIPVSDVEEGMVQIEGEKPSRKDFTLRAHAF 542
                   E   SE Q+ ED  P K VK         + M     +    KDF+LR H  
Sbjct: 382 FPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHSYDKDSIEKDFSLRVHGI 441

Query: 543 GKAD 554
            KAD
Sbjct: 442 KKAD 445


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  176 bits (446), Expect = 4e-42
 Identities = 96/185 (51%), Positives = 117/185 (63%), Gaps = 1/185 (0%)
 Frame = +3

Query: 3   RNLGDKQFFFVNGRPVDMPKVSKLVNELYKTSSSKQYPIIVMNFIVPTRVYDVNVTPDKR 182
           RNLGD+Q++FVNGRPVDMPKVSKLVNELYK ++S+QYPI +MNF +PT   DVNVTPDKR
Sbjct: 258 RNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSRQYPIAIMNFTIPTTACDVNVTPDKR 317

Query: 183 KIFFSDEGSLMRSLRESIEKIYSPSHCSYSTNKVEEHQKEGNGLNLCHHQEIPTLPLKRI 362
           KIFFSDE S++ +LRE +EK YS S+  YS NK E H K  +   LC  +E        +
Sbjct: 318 KIFFSDESSILLALREGLEKNYSSSNSCYSVNKFENHAKAADSSQLCSPRE-----KSNM 372

Query: 363 PSKVYSNNEAECSEVQV-VEDDSPIKTVKKRIPVSDVEEGMVQIEGEKPSRKDFTLRAHA 539
            SK  S N  +  E Q   ED SP+ TV+ +     V E  +    EK   KDF LR H 
Sbjct: 373 LSKQSSANGNDSEETQTDAEDSSPLMTVEVKSKPFQVGERSIHDIEEKFMMKDFALRLHG 432

Query: 540 FGKAD 554
             K D
Sbjct: 433 IKKTD 437


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  176 bits (445), Expect = 5e-42
 Identities = 96/178 (53%), Positives = 113/178 (63%)
 Frame = +3

Query: 3   RNLGDKQFFFVNGRPVDMPKVSKLVNELYKTSSSKQYPIIVMNFIVPTRVYDVNVTPDKR 182
           R LGD+QFFFVNGRPVDMPKV KLVNELYK ++S+QYPI +MNF VPTR YDVNVTPDKR
Sbjct: 262 RTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKR 321

Query: 183 KIFFSDEGSLMRSLRESIEKIYSPSHCSYSTNKVEEHQKEGNGLNLCHHQEIPTLPLKRI 362
           KIFFSDEGS++ SLRE +EKIYSPS  SYS N+ EE  +E +   L   Q       K++
Sbjct: 322 KIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPTEETDNSELNPPQTQILSSSKQL 381

Query: 363 PSKVYSNNEAECSEVQVVEDDSPIKTVKKRIPVSDVEEGMVQIEGEKPSRKDFTLRAH 536
                   E   SE Q+ ED  P K VK         + M     +    KDF+LR H
Sbjct: 382 FPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVKEMDHSYDKDSIEKDFSLRVH 439


>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  174 bits (441), Expect = 1e-41
 Identities = 98/197 (49%), Positives = 126/197 (63%)
 Frame = +3

Query: 3   RNLGDKQFFFVNGRPVDMPKVSKLVNELYKTSSSKQYPIIVMNFIVPTRVYDVNVTPDKR 182
           RNLGD+Q++FVNGRPVDMPKV+KLVNELY+ ++S+QYPI +MNFIVPTR  DVNVTPDKR
Sbjct: 259 RNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSRQYPIAIMNFIVPTRACDVNVTPDKR 318

Query: 183 KIFFSDEGSLMRSLRESIEKIYSPSHCSYSTNKVEEHQKEGNGLNLCHHQEIPTLPLKRI 362
           KIFFSDE S++ +LRE ++ IYSPS+ SYS NK EE  K  +    C   E  +L L + 
Sbjct: 319 KIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERIKAASNSQSCSPHE-KSLVLSKQ 377

Query: 363 PSKVYSNNEAECSEVQVVEDDSPIKTVKKRIPVSDVEEGMVQIEGEKPSRKDFTLRAHAF 542
            S V ++ E    E    +  + ++TVK +   S+V E       EK   KDFTLR H  
Sbjct: 378 LSAVSNDAEEILVEEHTSDGSNLLQTVKMKSHPSNVGEN----RDEKRISKDFTLRVH-- 431

Query: 543 GKADISSEYEYHSKKLR 593
              DI   Y + +   R
Sbjct: 432 ---DIPKVYSFPNSNNR 445


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